Pseudopodoces humilis (Tibetan ground-tit): 102105730
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Entry
102105730 CDS
T02921
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phi03016
]
102105730 (TRMT13)
Enzymes [BR:
phi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
102105730 (TRMT13)
Transfer RNA biogenesis [BR:
phi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102105730 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
OrgC
Methyltransf_32
DUF7077
zf-TRM13_CCCH
Motif
Other DBs
NCBI-GeneID:
102105730
NCBI-ProteinID:
XP_005521316
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MIPAPGRRFCGEHGHEEEQNDRKRIPCPLDPKHTVYEDQLQKHLKKCNSREKPKPVYFVQ
DINAGLKDIIEIPEKKVPLSALSIEELQNLIIKLKKASNGLELHLKEQILSHQALQEALN
DPKNGESAFKHLKQQASILGNMEKLHLLGPGRCFVEFGAGRGKLSHWVDIALENVESVLF
LLVERATTRFKVDGKHKKRDSIFERLQVDIQHLCLNKVPILEKKKLPLVGIGKHLCGAAT
DLALRCLVESYTTCCDGEGEEPAPKRCRAAQTEVAPHKSAGNESTTGDHKPVAGIVIALC
CHHKCDWTHYVGRDFFKSVGLGPVEFHYFQRMSSWATCGMQETISKAAGEGSEDQTNDTE
EHEETLSRTESGSDTLQGILSVEERKEIGCLCKRLIDHGRIEYLQHQGYKAALQYYTESA
VSLENVLLTAVPNPSLIPEPTI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggcgcccggcaggcgcttctgcggggagcacgggcacgaggaggaacaaaat
gacagaaaaagaattccgtgccctcttgatccgaaacacactgtatatgaagaccaacta
caaaaacatttaaaaaaatgtaactcaagagagaagccaaagcctgtctactttgttcaa
gatattaatgctggtttaaaagacataatagaaataccagaaaaaaaagttcctctatct
gctctgtctatcgaagagctacagaacttaattatcaagttgaaaaaagcaagtaatggc
ctggaacttcatcttaaggaacaaatactgtcccaccaggctttacaagaagccttaaat
gacccaaagaatggggaatctgctttcaagcacctgaaacaacaggcttctattttaggt
aacatggaaaaattgcatttacttggtccaggaaggtgttttgtcgagtttggagctggg
cgaggaaagttgtctcattgggttgatattgccttagagaatgttgaaagtgttctgttt
ttgcttgtggaaagggcaaccacaagattcaaggtggatggaaaacacaaaaagagagat
tctatatttgagaggcttcaagtagacattcagcacttatgtttaaataaggtacctatt
ttggagaagaaaaaactaccattggtaggaattgggaagcatttgtgtggtgctgcgaca
gatcttgctttgagatgcttggttgaaagttacaccacttgctgtgatggagaaggtgaa
gagcctgcaccaaaacgctgcagggctgctcagacagaggtggctcctcacaaatctgct
ggtaatgaaagcaccacaggagaccataagcctgtagctggaattgttattgctctgtgt
tgccatcacaagtgtgactggacacattatgtgggcagagatttctttaaatcagtggga
ctgggaccagtggaattccattattttcagagaatgagtagttgggccacttgtggcatg
caagaaaccataagcaaagctgcaggtgaaggcagtgaagatcaaactaatgacacagaa
gaacatgaggaaacgctcagcaggacagagagtggttctgatactttacaagggatactg
agtgttgaggagcgaaaggagatcggttgcctttgcaaacggctgattgatcatggacgg
attgagtatttacaacaccaaggatacaaggctgcactgcagtattatacagagtctgct
gtgtccttggagaacgtcctgttgacagctgtcccaaatccttctttgataccagagcca
actatatga
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