Pseudopodoces humilis (Tibetan ground-tit): 102105888
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Entry
102105888 CDS
T02921
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102105888 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102105888 (TRIM54)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102105888 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_5
zf-B_box
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
TRIM_CC
zf-RING_6
RHH_9
CYP38_PsbQ-like
Sina_RING
Zn_ribbon_FGT1_2
DUF5799
CoiA_N
Motif
Other DBs
NCBI-GeneID:
102105888
NCBI-ProteinID:
XP_014116784
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MNFAVGLKPLLAEARSMESLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSSAVPSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESARPLHAKA
EQHLMCEEHEDERINIYCLRCEAPTCSLCKVFGAHKDCEVAPLPAVYQRQKSELSDGIAM
LVAGNDRIQAIITQMEEICHTIEENGRRQKQHVGLRFDALYGILEERKKELLQSIAAEQE
AKLQRVRGLIRQYGDHLEASSKLVESAIQAMEEPQMAVYLQHSKELLKKITDMSKASMSS
RPEPGYENMDHFSINVDYVAEMLRTIEFQTEPLGEDEGDGPGDGSEATTDEDRLDSLEVP
EAAEDVGPRQKPASSPHGQH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgccgtggggctgaagccgcttctggcggaggcgaggagcatggagagcctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaacctgtggtcatcctg
ccctgccagcacaacctctgccgcaagtgcgccaacgacgtcttccaggcctccaacccg
ctgtggcagtcacggggctccagcgccgtgccgtcgggcggccggttccggtgtccgtcg
tgccggcacgaggtggtgctggaccggcacggggtgtacggattgcagcggaacctgctc
gtggagaacatcatcgacatctacaagcaggagtcggcccgaccccttcatgccaaggcc
gagcagcacctcatgtgtgaggagcacgaggatgagaggatcaacatctactgcctgcgc
tgcgaggcgcccacctgctccctgtgcaaggtgtttggggcgcacaaggactgcgaggtg
gctccgctgccggccgtctaccagcgccagaagagtgagctcagcgacggcatcgccatg
ctggtggcggggaacgaccggatccaggccatcatcacacagatggaggagatctgccac
accatcgaggagaacggccggcggcagaagcagcacgtggggctgcggtttgatgcgctg
tacgggatcctggaggagcggaagaaggagctgctgcagagcatcgcagccgagcaggag
gccaagctgcagcgtgtccgtgggctcatccgccagtacggagaccacctggaggcctcc
tccaaactggtggagtcagccatccaggccatggaggagccccagatggccgtgtacctg
cagcactccaaggaactcctgaaaaagatcacagacatgtccaaggcatcaatgagcagc
cgccctgagcccggctacgagaatatggaccacttctccatcaacgtggactacgtggct
gagatgctgaggaccatcgagttccagacagagccactgggcgaggatgagggtgacggg
cctggggacggcagtgaggccacaacggatgaggaccggctggacagcctggaggtgccc
gaagctgctgaagatgtggggccgaggcagaaaccagcgagttctccccacggtcagcac
tga
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integrated database retrieval system
