Pseudopodoces humilis (Tibetan ground-tit): 102106071
Help
Entry
102106071 CDS
T02921
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102106071 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phi03041
]
102106071 (DHX8)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102106071 (DHX8)
Spliceosome [BR:
phi03041
]
Complex C
Other components
Step II factors
102106071 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
nSTAND_NTPase5
PhoH
TsaE
Sigma54_activ_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102106071
NCBI-ProteinID:
XP_005531548
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MAELAAAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKAVLLK
NGAEFTDSLISNLLRLIQTMRPPPKPSSSKEAVVKPKSEKEKLRELYPALCRPDNPNIRN
MLDEDDVKVAADALKELEALMPSADRQGKQRSSDHRVKKRKRSRSRSRDRKRRHRSRSRS
RSRTWDRSRGKSRYRSRSRSWSPSKDRKDRDRYLEKSHERWRDKHIDRPPAEEPSIGDIY
NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG
SKTSLSMKDVDQDTGEDLNPNRRRNLVGEINEETSMRNPDRPSHLSLVSAPEVEDDSLER
KRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPF
LRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTH
WVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIF
RLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAK
RVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAH
ERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILY
TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELI
ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK
TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAST
VLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPM
LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV
YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAIC
SGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTI
DPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggcggcggccgaggagctcgccaagctcgagtacctgtcgctggtctcc
aaggtctgcaccgagctcgacaaccacctgggcatcaacgacaaggacctggctgagttt
gtgataagtcttgccgagaaaaataccacatttgacacatttaaagcagttcttctgaag
aatggtgctgagttcactgattccctcattagtaacttgctacgtctcatacagacaatg
cggcctccaccaaaaccatccagcagcaaagaggcagttgtcaaacccaaatcagagaaa
gagaagttgagggagttgtatccagccctttgcaggccagacaatcccaacatcaggaat
atgctggatgaagatgatgtgaaagtggcagctgatgccctgaaagaacttgaagctctg
atgcctagtgcagacaggcagggcaagcagaggagcagcgaccatcgagtgaagaaaagg
aagaggagccgaagtcgtagcagggacaggaagcgaaggcacagatctcggtccaggtct
cgttccaggacttgggatagaagcaggggaaaatccagataccggtcaaggagcagaagt
tggagtcccagtaaggaccgcaaggatcgggacaggtaccttgagaagagccatgagagg
tggagagacaagcacatagaccgtccaccagctgaggagccttccattggagacatctac
aacggcaaagtcacgagcataatgcagtttgggtgctttgtgcagctggaaggactaagg
aaacgttgggagggtttggtccacatctcagagctgcgaagagaaggacgggttgccaac
gttgctgatgttgtgagcaaaggccaaagagtgaaagtcaaagtgttatcttttactgga
tccaaaaccagcctgagcatgaaggatgttgatcaagacactggggaagacttgaaccca
aaccgtagaaggaacctggttggagaaatcaatgaggaaacatccatgaggaacccagac
aggcccagtcacttgtccctggtgagcgcccccgaggtggaggacgacagcctggaacgg
aaacgcctcacccgcatttcagaccccgagaagtgggaaataaaacagatgattgcagct
aatgtgctttccaaggaagagtttcctgacttcgatgaggagactgggattcttcctaaa
gttgatgatgaagaagatgaggatcttgagattgagctagttgaagaggagccaccattt
cttcgaggtcacaccaaacagagcatggatatgagtcccattaaaatagtaaagaatcca
gatggttccttgtcccaggctgcaatgatgcaaagtgctttagctaaagagaggcgagaa
cttaaacaagcccagagagaagcagagatggattccatccccatgggcctcaacacacac
tgggtggatcctctccctgatgtggatggaagacaaatagctgcaaacatgcgaggtatt
gggatgatgccaaatgatatcccagagtggaagaaacatgcatttggtggcaacaaagct
tcttatggtaagaagacacagctttccatcattgaacagagagagagtctcccaatcttc
agactgaaggagcaactgatacaagctgtgcatgacaaccagattctgattgttattgga
gagacaggatctgggaaaacaacccagattacccaatacctggctgaggcaggatatacc
tcaagaggaaagattggatgtactcagcctcgcagagtggctgcaatgtctgtagcgaag
agagtgtcagaggaattcggttgctgcttgggacaagaggttggctacaccattcggttt
gaagactgcaccagccctgagactgtcatcaagtacatgacagatgggatgctactgaga
gagtgcctgatagacccagatctgacccagtatgccattatcatgctggatgaggcccat
gagaggaccatacatacagatgtgctctttgggctcctgaagaagacagtccagaaaagg
caggacatgaagttgatagtgacatcagcaacgctggatgctgtgaaattctctcagtat
ttctatgaagcaccaatcttcacaattcctggcagaacatacccggtagaaattctgtac
acaaaagagccagagacagattatttggatgccagtctgattacagtaatgcagatccat
ttaacagagccaccaggtgacattttggtctttctaactggccaggaagagattgacact
gcctgtgaaatcctctatgagaggatgaaatctctaggacctgatgttccagagttaatt
atcctaccagtatattcagctttgcccagtgaaatgcagaccaggatctttgacccagcc
ccaccagggagcagaaaggttgtcattgccaccaacattgcagagacatctttgactatt
gatggaatatattatgtggttgatcctggctttgtgaagcagaaagtctataactccaag
actggaattgaccagctggtggtgacaccaatttctcaggctcaagccaagcagcgtgca
ggaagggctgggagaacgggcccaggaaaatgctacaggttatacacagaacgtgcatat
agagatgagatgttaaccaccaacgtgcctgaaatccagagaacaaatctggccagtaca
gtgctctccctgaaggctatgggcatcaacgacttgctgtcctttgactttatggatgct
ccccccatggaaactctcataactgccatggagcagctctacaccctgggagctctggat
gatgaggggctgctcactcgacttgggcgcaggatggcagaattccccttggagcctatg
ctgtgtaagatgttgatcatgtctgtgcatctggggtgcagcgaggagatgttgaccatt
gtctccatgctgtctgtgcagaatgtgttctacaggccaaaggataaacaagcacttgct
gatcaaaagaaagcaaagttccatcaaacagaaggtgaccacctcacgctgctggctgtg
tacaattcctggaagaataataagttttcaaatccctggtgctatgaaaattttatccag
gcccgatccttacggcgggcacaggacattcgcaagcagatgttgggcatcatggacagg
cataagctggatgtggtgtcctgtgggaaggcaacagttcgggtccagaaggccatttgc
agtggcttcttcagaaacgcagcaaagaaggatccccaggaagggtatcggacactcatt
gaccagcaagttgtctacatccacccatccagtgctctcttcaacaggcagcctgagtgg
gtggtgtatcacgagctggtgctgaccaccaaggaatacatgcgggaggtgacaaccatc
gatcctcgttggctggtggagtttgccccagctttcttcaaggtctctgatccaaccaag
ctgagcaagcagaagaagcagcagcggctggagcccctctacaaccgctacgaggagccc
aacgcctggaggatatcccgtgcgttccggcggcgatga
DBGET
integrated database retrieval system
