Pseudopodoces humilis (Tibetan ground-tit): 102106120
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Entry
102106120 CDS
T02921
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03440
Homologous recombination
phi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102106120 (BRIP1)
03460 Fanconi anemia pathway
102106120 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phi03400
]
102106120 (BRIP1)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102106120 (BRIP1)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102106120 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
102106120 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
HBB
ResIII
DUF2703
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
102106120
NCBI-ProteinID:
XP_014110364
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MPSDGAEYTIGGVKILFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQALYEKTVPTSSSDKEDRKAEPSPPCHCKCHSQPKSNEAATSVTHSAPCSANYPDT
GTSRKPGSSLTNTECKENETLASKLSAKKKLSLHDSENDDFQVDRKRIRPLETEQQVRKR
HCFAKGVQFVDALEVYHQRKNGELTVHSEKSMKTTTFSPQTPPGPCTECSCSSGKEPDKD
PSHTKKKENGDQLCVPKIFFGTRTHKQITQISRELKRTAYSCAPMTILSSRDYTCIHPVV
SNSSNRNEMCVELLEGKHGRSCSYYHGVHKLSEHHALQPASVYQAWDIEDLVSLGRKLRA
CPYFAARELMVGADIVFCPYNYLLDPQIRDSMDIKLKDQVVILDEAHNIEDCARESVSYG
VTESQLRAAREELDFMVNNNIRQKHHEPLRAVCCSLINWLQESSGQLVERAYETACKVWS
GKEMLNFLHQMGITGITFPILQKHLVAVLEKEEKVSMHGREELIGVPVVSPATQIVLKGL
FMVFSCLFKENSRFADDYKVALQQTYTWLTENQRDDADSGSFFTRPKHKKSSRQKTLVHM
LNFWCLNPAVAFSELNEVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVWVG
TIGAGPNGRKLCATFQHTETFEFQDEVGALLLSVCQTIGQGILCFLPSYKMLDKLKDRWM
HTGLWRKLEDVKTVIAEPQGGAKSDFDELLKIYYDAIKCKGEKDGALLVAVCRGKVSEGL
DFCDENARAVVTIGIPFPNVKDLQVELKRKYNDQHKSTRGLLSGSQWYEIQAYRALNQAL
GRCIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQRIQHHGSFGSALESLHAFALRNQ
RGGDPSSEHSTEFTAHSRDLSQGSQQEATVPLSPDVPAKSQEENLGSVHFTATISSVHPT
AWDQPSDSMAAVKQSDQEFDVESHSHHEKQRRKHMDSTPKIPAIKIETEKMNGWTNADTV
GENCCSEPLTSTPVAKNCRATASSRQEHVNGPSDIIYHLNQCQSSSIAEHQPSGPESCLD
TTHFSVKNAEAPGAEGHPGKLQLPAEPCRELPSAAGRAEPSALNVDEDEDESIYFTPELY
DDADPEKQGTEAPLPACCTTGNWVECGNSTVPADLFATNASETQNVTDKAEAGRSPHGVM
ENVRSRDSAVDAVEVAAAAGAEQGASQEMDTPKRKISLSRSRNKGVSSFPLGNSGTC
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgatggggcagaatataccattgggggggtgaagatcctcttcccctgcaag
gcttacccctcccagcttgctatgatgaatgctattgttaaaggcttgaataacaggcag
cactgtttgctggagagccccacaggaagtggcaaaagcttggcattactttgttctgca
ttatcatggcagcaggctttgtatgaaaaaacagtgccaacctcatcgagtgacaaggag
gacaggaaggcagagccatccccaccgtgtcactgcaagtgtcactcccagcctaagagc
aacgaggctgcaacgagtgtgactcacagtgctccttgttctgccaattatcctgacaca
ggaacttccagaaagcctggaagctcactgacaaacacagaatgcaaggaaaatgaaaca
ctggcttcaaaactgtctgccaaaaaaaagttatcccttcatgacagtgagaacgatgac
tttcaagtagacaggaaaaggattcgtcctttagaaacagagcagcaggttagaaaacgt
cactgttttgcaaaaggagtccagtttgttgatgctttagaagtttatcatcagagaaaa
aatggagagctgactgttcactctgaaaaaagcatgaaaaccactactttttctccccaa
acacctcctggcccttgcactgagtgttcctgttcttctgggaaagaacctgataaagat
cccagtcacacaaagaagaaagaaaatggagatcagttgtgtgttcccaagatttttttt
gggacacgaacacacaagcaaattacccagatcagcagggagctgaagaggacagcatat
tcctgtgcccccatgacaatcctttccagcagggattatacctgtattcatccagtggtg
tccaacagtagtaacaggaatgaaatgtgtgtagaattgctggaaggaaaacatggcagg
tcctgctcttattaccacggtgttcacaagctcagtgagcaccatgccctgcagcctgcc
agtgtgtaccaggcctgggacattgaagacctggtgagcctgggcaggaagcttcgtgcc
tgtccctattttgcagccagagagctcatggtgggggcagacatcgtgttctgtccttac
aattatctcctggacccacagatccgggacagtatggacattaagctaaaagaccaagta
gtcattttggatgaagcccacaacattgaggactgtgctcgggagtccgtgagctacggg
gttaccgagagccagctccgggctgcccgagaggagctcgatttcatggtcaacaacaac
atcaggcagaagcatcatgagcccctccgagctgtgtgctgctccttgataaactggttg
caggaaagctctgggcagctggtggagagagcctatgaaactgcctgtaaagtgtggagt
ggcaaagaaatgctcaactttttgcaccaaatgggaataactgggattacttttcccatt
ttacagaaacatcttgttgctgtcctggaaaaagaagaaaaagtgtcaatgcatgggaga
gaggaacttattggggtgccagttgtgagccctgcaacacagatcgtgctcaaaggcctg
ttcatggtcttttcctgtctctttaaagagaacagcaggtttgcagatgattacaaggtt
gctctacagcaaacttacacctggttgactgaaaaccaacgtgatgatgcagattcaggt
tccttcttcacaaggcccaagcacaaaaagagttcaaggcagaaaacccttgtccacatg
ctaaatttttggtgcttgaaccctgctgtggctttttctgagttaaatgaagttagaaca
attgttctgacatcaggcacactctctcccatggattccttttcctcagagcttggtgtg
aagttttccattcagctggaggcaaatcatgttatccggaattcccaggtttgggtcggc
acgatcggagcgggccccaacgggcggaagttgtgcgcgacgttccagcacacggagacc
tttgagttccaggatgaggtgggagcactgctgctttcagtctgtcagacaattggccaa
ggaattttgtgctttttgccatcctataagatgctggacaagttaaaggatcgttggatg
cacactggcttgtggagaaagttggaggatgttaaaacagtcattgcagagccccaggga
ggggccaagagtgactttgatgagttgctgaaaatctactatgatgcaatcaaatgtaaa
ggagagaaagatggagctctcctggtagctgtgtgcagagggaaggtcagtgaggggctg
gatttctgtgatgagaacgccagggcagtcgtgaccatcggaatcccctttccaaacgtg
aaggaccttcaggttgaattaaagaggaaatacaatgaccagcacaaaagtacaagaggc
cttttatcagggagtcagtggtatgaaattcaagcttacagagctctcaaccaagccctg
ggaaggtgtataaggcacaggaatgactggggggctctaattttagttgacgaccgcttc
aggaataacccaaataaatacataactggattatccaagtggatccggcagcggatccag
caccacgggagtttcggcagcgctctagaatccctgcacgccttcgccctcaggaaccag
aggggtggggatccctcctcagagcacagcactgaattcactgcacattccagggacctc
tcacaaggctctcaacaagaggccaccgttcctctgtccccagatgttcctgctaaaagt
caggaggaaaatttgggctcagttcattttactgcaaccatcagctcagttcatcccaca
gcatgggatcagccaagtgacagcatggcagcagtgaaacaaagtgaccaggaatttgat
gtagagagccattctcaccatgaaaaacagagaaggaaacatatggacagcacccccaaa
attccagcaattaaaatagagacagaaaaaatgaatggttggaccaatgctgatactgtg
ggagagaattgctgctctgaaccactgacttcaactcctgtagccaagaactgcagggcc
acagcaagcagcagacaggagcacgtgaatgggcctagtgacattatctatcatttaaat
caatgccaatcatcatcaattgcagaacatcaaccaagtggaccagaatcatgtttggac
acaactcatttttcagttaaaaatgctgaggctccaggtgctgaaggacatcctggtaag
ctccagcttccagctgagccctgcagggagctcccttcagcagcagggagagctgagcct
tcagcattaaatgtggatgaggatgaggatgaaagcatttacttcaccccagaactctat
gatgatgcagatccagagaaacagggaactgaagccccacttccagcctgttgtaccact
gggaattgggtggaatgtgggaactccacagtccctgctgatctttttgccaccaacgcc
tcagaaacacagaatgtgactgacaaagctgaggctggcagaagtccccatggagttatg
gaaaatgtgaggagcagggacagtgcagttgatgctgtagaggtggcagctgcagcagga
gcagagcagggagcatctcaggagatggacacacctaaaaggaaaatcagcctttccaga
tcccgaaataaaggtgtgtcatcctttccactgggcaatagtggcacctgctga
DBGET
integrated database retrieval system
