Pseudopodoces humilis (Tibetan ground-tit): 102106135
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Entry
102106135 CDS
T02921
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04382
Cornified envelope formation
phi04510
Focal adhesion
phi04512
ECM-receptor interaction
phi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102106135 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102106135 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102106135 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102106135 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phi04147
]
102106135 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
phi00536
]
102106135 (COL4A6)
Exosome [BR:
phi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102106135 (COL4A6)
Glycosaminoglycan binding proteins [BR:
phi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102106135 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102106135
NCBI-ProteinID:
XP_014114233
LinkDB
All DBs
Position
Unknown
AA seq
1695 aa
AA seq
DB search
MGRTGALVLLLLWLGAELASAGGKKSYSGPCGGRDCSAGCKCFPEKGGRGRPGLIGLQGP
IGPPGFTGPEGLPGAKGERGAVGPPGPAGLKGDKGPMGVPGFQGINGIPGHPGQSGPRGL
PGLDGCNGTTGSRGISGPDGFPGLPGLSGRPGPKGLKGEPVLAQGSLKGMKGENGLPGLD
GVPGPKGFPGPIGPAGPIGLQGLQGPVGPPGPPGPKGNMGLGFQGEKGEKGDVGMPGPPG
PPPSTGILEFMGFPKGKQGEKGEPGPQGFPGDQGLPGTPGFGGVGEKGEKGVPGLPGGRG
LLGLDGSEGIPGRKGHPGVPGYPGLDGAEGMKGELGDIGPPGPPLIIDREGVVISGAPGD
PGNMGTPGPPGDEGIVGLPGLPGAPGFPGLERDGIGPGGSPGIPGVKGEVGEPGRATIGI
PGPPGRGGLPGLPGAPGLPGSPRPSFFPVIILTGNIGSPGEPGQRGLPGALGPKGYKGEA
GDCACDGGVTRAGLKGISGPPGPSGSPGVPGAKGDGGDPGSVGAPGLQGPLASAGQQGLP
GLKGEKGDPSYATVKGTRGDRGATAPRGPSGIPGTPGRDGLPGLSGPPGPPGDGGLGFPG
EKGLPGLPGSKGHQGETGSPGVGYPGPRGVRGPPGDTGMDGFPGQAGLPGPPGITLPCIV
PGAYGPPGTPGFPGPPGPKGSKGFSGIPGQPGLHGSKGQQGSPGIIGLQGEPGFPGPRGE
QGSQGLPGLDGTDGLPGKMGASGLAGIKGSPGDILGAESGTLGKHGRPGLPGDKGLTGDI
GFPGPKGLDGRPGLLGVKGEQGHPGYSGVPGLQGPPGPGSPFGIEGKPGPLGSAGLAGAP
GCQGAPGVKGVAGDIGPQGPAGMKGFPGLDGAPGSPGERGFLGPPGPFGQDGRPGFSGPK
GEKGSSGLLGFPGMPGLPGVPGVNGFKGTPGTAGGKGSLGAVGLQGQKGDRGDIGPPGLP
VLGTSEQALQIKGDKGDPGLAGLGGFPGPRGDKGIPGKPGQPGLPGPVGSPSKERRLHGD
PGFPGPRGQPGLPGQKGAQGIMGFPGMPGERGSDGTTGTLGFPGPIGLPGPKGEQGESVG
VPGIAGPKGERGDSGFPGEKGREGLKGEPGYPGNTGVNGHKGSPGDLGQEGPAGIPGNAG
LRGAPGPPGPPGQPGSVGFPGALGTAGPKGFHGFPGLNGLNGLPGTKGSPGTPGLSETGL
KGPAGLPGTKGEEGSPGLGRGAAGFPGPKGSSGDMGPPGPMGLPGLPGTPGISLLSDIHG
RPGDAGVPGTHGSSGFPGPPGPRGPPGPASDQGDTGTPGFPGVLGLRGIKGDLGPTGPIG
LPGASGFKGARGEPGLMGMPGKDGPPGDPGYAGLKGEMGHRGLPGRPGAPGITPQPEELT
APAGLPGLPGIDGVPGFDGDPGFHGLAGKPGPKGLPGRSGLKGRDGLPGIPGIAGDPGLS
GAPGPQGFEGAAGKPGSHGLPGMPGRSVGIGYTLVKHSQSAQIPPCPMGMNKLWDGYSLL
YVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPV
YSVQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPQGWRSLWIGYSFLMHTAAGAEGGGQ
SLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQEQQFVSAPPSETLKAGQ
LRTRVSRCQVCMKNL
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcacaggggcgctggtgctgctgctcctctggctgggcgcggagctggcgagt
gcgggtggaaagaaatcctacagtgggccatgtgggggccgcgattgcagtgctggatgc
aaatgttttccagagaagggtggacgtggtcgaccaggactgattgggcttcaagggcca
ataggaccaccgggatttactggcccagaaggtttgcctggagcaaaaggtgagagagga
gcagtgggccctcctggaccagctggactgaaaggtgacaagggtccaatgggagttcca
ggatttcagggcatcaatgggatcccaggtcaccctgggcagtctggacctagaggcttg
cctggccttgatggctgcaatggtaccactgggagtcgtggcatttctggaccagatggg
tttcctggcctacctggactgtctggtcgtcctggcccgaaaggccttaaaggagaacct
gttcttgctcaaggcagtctcaaaggaatgaagggtgaaaatggtcttcctggattggat
ggagtacctggcccgaaaggttttccaggtccaataggtcctgcaggccctataggatta
caaggtttgcagggtccagtgggtccccctgggccaccaggtccaaaaggtaacatggga
ttaggctttcaaggagagaaaggagaaaagggcgatgtggggatgcctgggcctccaggt
cccccaccatctactggaatactggaattcatgggatttccaaaggggaagcaaggggaa
aagggtgagccaggtcctcaaggattccctggagaccaaggattgcctggtaccccgggc
tttggaggtgttggagaaaaaggagaaaaaggtgtgcctggcttaccaggtggcaggggt
cttctgggactggatggatctgaaggaattccagggagaaagggccatccaggtgttcca
ggctatccaggactggatggagctgaaggcatgaagggtgaattaggtgacattggtccc
ccaggtcctcctctcattattgacagggaaggtgtagtcatttcaggtgcccccggtgac
cctggaaacatgggaacacctggtcctcctggagatgaagggatcgttggtttaccaggc
cttccaggggctccagggtttccaggcctggagagagatggaataggccctggagggtct
ccaggtattccaggagtgaagggtgaagtgggagaacctggaagagcaacaattggaata
ccaggccctccaggcagaggtggtttaccaggtctgcctggagcaccaggattgcctggt
tcaccacgcccttcatttttcccagtgataatcctgactggaaatattgggtccccaggg
gagcctgggcaaagaggtctgccaggagctttgggtccaaagggctacaaaggagaggca
ggtgattgtgcttgtgatggaggagttacaagagccggtctaaaaggcatctcaggtcca
ccaggtccatcaggaagccctggtgtacctggtgccaaaggtgatggtggagacccaggc
tctgtgggagcaccaggactgcaaggccctctggcttcagctggtcaacaaggacttcca
ggccttaagggagaaaaaggggatccatcctatgcaacagtcaaaggtactcgtggggac
cgtggagcaacagcacccagaggaccttcaggcatcccaggaactccaggcagggatgga
cttccaggcttgtcaggcccaccgggccctccaggtgatggtggactaggtttcccaggt
gaaaaaggtttgccaggattacctggctccaagggccatcaaggagaaactggttctcct
ggtgttggatacccaggtcctagaggagttcgtggaccaccaggtgacactggaatggat
gggtttccaggacaagcaggtcttccaggccctccaggtatcaccttgccctgcatagtt
cctggagcatatgggcccccagggactcccggctttccaggaccaccaggtcccaaaggc
agcaaaggcttttctggcattccaggccaacctgggttacatgggtctaagggacagcaa
gggtctccaggaataataggcttgcaaggggaacctggcttccctggacctcgaggagag
caaggctcacaaggacttccaggactggatggaacagatggtttgcctgggaaaatgggt
gcttcaggcttagcaggaataaaaggatcgcctggagatatattaggagctgagagtgga
accctgggaaagcatggccgacctggactcccaggtgataaagggcttacaggtgatatt
ggatttccaggaccaaaagggctggacggaagaccaggccttctgggtgttaaaggtgaa
cagggtcatccaggatattcaggtgtccctggattgcagggacctcctggtcctggaagt
cctttcggcattgagggaaaaccaggacccttggggtcagctggccttgcaggagcacca
ggctgtcaaggggctcctggagtcaaaggcgtggctggggatataggaccacaaggccct
gctggtatgaaaggcttcccaggtcttgatggtgctccaggatctcctggggaaagagga
ttcttagggccacctgggccttttggtcaagatggacgtccaggtttctctgggccaaaa
ggtgagaaagggtcttctggcctgcttggtttccctggcatgccaggactgcctggtgtc
cctggagtgaatgggtttaaaggaactcctggcacagctggaggaaaaggaagtctagga
gctgtgggacttcaaggtcaaaaaggcgacagaggtgatataggtccaccaggtcttcct
gttcttgggacttcagaacaggcactgcaaatcaaaggagacaaaggagatcctggatta
gctgggcttggaggattcccaggacctagaggtgataaaggaatcccagggaagcctgga
cagcctggtctcccaggtccagttgggtcaccaagcaaagagagacgtcttcatggtgac
ccaggtttccctggtccacgtggacaacctggcctgccaggacagaagggtgcacagggt
atcatgggatttccaggaatgccaggagagaggggttcagatggcacgacaggaacactt
ggattcccaggacctattggccttcctggtccgaagggcgaacagggagagtctgttggt
gttcctggcattgctggaccaaaaggagagagaggagactcagggtttccaggagagaaa
gggagagaaggactcaagggtgaaccaggctacccaggaaacactggggtgaatggacac
aaaggcagcccaggagatcttggccaagaaggaccagcaggaatccctggaaatgctggg
ctgagaggggcccctggcccaccaggacccccaggacagccaggatctgttggattccct
ggagctcttggaacagcaggacctaaaggctttcatggatttccaggtttaaatggtctg
aatggcttgccaggcacaaaagggtcccctggaacaccaggtctgagtgaaactggattg
aaaggacctgcaggtctcccaggtacaaagggtgaagaaggctctccaggcttgggaaga
ggagctgcaggattccctggaccaaaaggctcatcaggagacatgggtccccctggtcct
atgggactgcccggcctgccaggaacacctggaatttctcttctgtctgatatacatggg
agacctggagatgctggtgttccaggcactcatgggagttcaggttttccaggccctcca
ggaccacggggaccccctggcccagcttctgatcaaggtgacacaggcactccaggtttc
cctggtgttcttggcttgcgaggcattaagggtgatttgggacccactggtccaattgga
ctccctggagcatctggattcaaaggtgcaagaggtgagcctggcctaatggggatgcca
ggtaaagatgggcctccgggggatcctggttatgctgggctgaaaggtgaaatgggccat
cgaggtctccctggcagaccaggggctccaggaataaccccacagccagaagaactcaca
gcccctgcaggattacctggtctgccaggaattgatggtgttcctggctttgatggagat
cctggattccatggcctggctggaaaaccaggcccaaaaggtttgccaggaagatctggc
ttgaaaggacgtgatggcttacctgggattcctggcatagctggggatccaggactttcg
ggtgccccaggaccacagggatttgaaggtgctgctgggaagccaggttcccatggtttg
ccaggaatgcctggtaggagtgtgggcattggatacactctagtgaagcacagtcaatca
gctcagatccccccgtgtcccatgggaatgaataagctctgggatggctacagcttactg
tatgtggagggacaggagaagtcacataaccaggatcttggttttgctggctcatgtttg
cctcgcttcagcaccatgccttttatttactgcaacataaatgaagtgtgctattatgcc
agccgaaacgacaagtcctactggctctccaccactgctcccatccccatgatgcctgta
tacagcgttcagatcccacagtacatcagccggtgctctgtgtgtgaagcaccttcgcag
gctgtggctgtgcacagccaggacatcaccatcccacagtgtccccagggctggcgcagc
ctgtggataggatattccttccttatgcacactgcggcaggggcagaaggtggaggccag
tcccttgtctcacccggttcctgcctggaggatttccgagctactccatttattgagtgc
aatggtgctcggggaacatgccattacttcgccaacaaatacagcttctggctgacaaca
gtggagcaggagcagcagtttgtcagtgctcctccctcagagactctgaaagcggggcag
cttcggactcgcgtcagccgctgccaggtgtgcatgaagaacttgtag
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integrated database retrieval system
