Pseudopodoces humilis (Tibetan ground-tit): 102106296
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Entry
102106296 CDS
T02921
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102106296 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phi02000
]
102106296 (ABCA4)
Transporters [BR:
phi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102106296 (ABCA4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
102106296
NCBI-ProteinID:
XP_014106058
LinkDB
All DBs
Position
Unknown
AA seq
2256 aa
AA seq
DB search
MNFFRQVRLLLWKNWVLRRRQKLRFLVELVWPLSLFLVLVWLRKANPLYRQHECHFPNKA
MPSAGTLPWLHGIFCNMNNPCFRSPTHGEGPGVVSNYKNSILARVYKDAQELLLEAPEIH
DLGRIWEELIIMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLENVGLTDFVVYQ
LINAQVRPEQFAYGVPSLTLKDIACSEMLLDRFIIFSSRRGLPSVHKAMCALSQDSLQRV
EDALYANVDFFKLFRLLPTVLDRNSPGADLKAWGRVLSNVSQAVQKLARKPSVQDLLRVL
QPFVQDGMPESLGHLVSSLSDLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIDSTRKKSGY
LYDNATTPFCNALIQNLESNPLTKIAWTAVKPLLMGKILFAPDSPSVREIIKNANSTFEE
LERLQLLTKAWEEVGPQLWYFFQNSLQMNMIRDSLKHPTVRDFLNSQMGAEGFTAEHIIN
FLHNGSSRNREKGMVDFDWRNIFSAVDQVLHLLSQYLECLTLDKFEGYHDETQLTRQALY
LLEENKLWAAVVFPDLEPTASNLPPHVTYKIRMDIDSVEKTNKIKDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIEHGIIKTQTSAEVPLGIYLQQMPYPCFVDDVFMITLNRAFPIFMV
LAWIYSVSMTVKSIVLEKEMRLKEAMKNRGMTNGVIWCTWFLDSFSMMAVSTCLLTALIM
YGQVLHYSNPLLFFLFLLTFTTATIMQCFLFSTFFSKANLAAACSGVIYFTLYLPHIICF
VWQDRLTINLKILASFLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSI
NMMLFDAFLYGILAWYLDNVFPGDYGLPQPWYFPVLESYWLGSRSPEAEKTATADAGNLN
TFFEPEPTGLIPGVCIQNLVKIFVNRPKPAVDGINITFYEGQITAFLGHNGAGKTTTMSI
LTGLFPPTSGTVLVGGLDIQTHMDSIRHRLGMCPQHNILFNHLTVAEHILFYSQLKGRSR
EEAEQELETMLEDMGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVVVLDEPTSGVDPY
SRRSIWDLLLKYRPGRTIILSTHHMDEADILGDRVAIISQGKLFCSGSPVFLKNCFGSGF
YLTLVRKMRTTKMGRATSFCSCGSQCSCSCSSCVHRGEEGAPELELDGDLNELAEVIHHH
IPEAKLIESIGQELIYLLPNKNFKQRSYASLFRELEETLDDLGLSSFGVSDTPLEEVFLK
VTAEADPEMQKTGDTQENGSALDKTPIENKPAEQTTLKTNDISRMPVGRAGDQNEGKGSR
QYKGFQLVHQQIKALLIKRFHHASRSYKDFLAQVVLPASFVLLSLVLTVIIPPFGEYPAL
TLHPWIYGQQFTFFSNERPGNEHMVSLTHAFLNKPGFGIRCMKNQPLLSFPCNHMPTAWN
TPAVHPNLSSLLGSQEWSPENPSPSCKCSTHKKLTMLPDCPAGAGGLPPPQRVQRSTEIL
QDLTHRNISDFLVKTYPTLIKGSLKSKYWVNEQRYGGISIGGRLPVLHVSGDQIVNFFSD
LGRMMNVTGGQASLAAAKEIPDFLKYMETEDNIKVWFNNKGWHAIVSFLNVANNAILRAN
LRTGQDPEEHGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMSFIPASFVLYLI
QERVTKAKHLQFVSGVSPVTYWLTNFMWDIVNYALSAGMVVAIFVGFNKKAYASPTNLPV
LVALLLLYGWAVIPMMYPASSFFSVPSTAYVALSCINLFVGINSSAITFILELFENKSLL
KFNKTLKNVLLVLPHFCLGRGLIDLAMNQAVTEVYARFGEEHVSDPFQWNFVGKNLVAMA
LQGVVFFFLNLFMQHRLCSTRWFAETDMSPIINEDEDVAEERKRIMNGGNKTDILQLQEL
TKIYAGRHKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTGDTDVTSGDAVVAGNSI
LTHISNVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIKRVAEWGIQKLGLPMY
ADQLAGTYSGGNKRKLSTAIALIGCPPLILLDEPTTGMDPQSRRLLWDSIVGVLRDGRAV
VLTSHSMEECEALCTRLAIMVQGTFKCLGTIQELKYKFGDGYIVTLKIKAPKSGLPPDPA
PAEKFIRINFPGSLQREKHYNMLQYQICSSSLAKIFRLIISNKENLHIEEYSVSQTTLDQ
VFVNFAKQQMEDEEMPLHPRAAGASREARVSPVAVA
NT seq
6771 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctttaggcaagtcagacttctcctctggaagaattgggtccttcggagaaga
caaaagcttcgttttctggtggagcttgtatggcctctgtcattatttcttgtgcttgtc
tggctgaggaaagctaatccactgtatcgccaacatgaatgtcacttcccaaacaaggca
atgccatcagcaggaacactgccatggttacatggcatcttctgtaacatgaacaatccc
tgtttccgcagcccaacccatggagagggtccaggtgtagtgtccaactacaaaaattcc
atccttgcaagggtatataaagatgctcaggagcttttactggaagcccctgaaatccat
gaccttggaagaatctgggaagaactgatcattatgactcagtttatggaaacaatgaga
actaatcctgaaagaattgcaggaagaggaatacgaattctagacattttgaaagatggg
gagaccctcacttccttcttgctagaaaatgttggcctcacagattttgttgtttaccaa
cttattaatgctcaagtgcgccctgaacagtttgcctatggtgttcctagcttgactctg
aaggacattgcttgcagtgagatgctcctggaccgctttattatcttcagcagccgaaga
ggtctcccttctgtacacaaggccatgtgtgccctgtcccaggacagtctgcaaagagta
gaagatgccttgtatgcaaatgttgatttctttaagctatttcggctgcttcccactgtg
ttggacagaaactcaccaggtgctgacctgaaggcctgggggagggtgctgtctaatgtc
tcccaagcagtgcaaaagctggccaggaagccaagcgttcaggaccttttgagggttctg
caaccatttgtacaagatggaatgccagaatccttaggccacttggtgagttccctgtcg
gatcttttctgtggctacccagaaggaggtggatccagagtgctttccttcaactggtat
gaagataacaactacaaagctttcctggggattgactcaacaaggaagaaatctggttat
ctttatgataatgcaaccacaccattttgtaatgcattgatccagaacttggaatcaaac
cctttaaccaaaatagcctggactgctgtgaagcccctgctgatgggaaaaatccttttt
gctcctgattcaccttctgtacgggaaatcataaaaaatgcaaactccacttttgaggaa
cttgaacgcctccaactgttgaccaaagcttgggaggaagtaggacctcagctgtggtac
ttctttcaaaacagcctgcaaatgaatatgatccgtgactctctgaagcacccgacagtg
agggacttcctgaacagccagatgggtgcggaaggcttcaccgcggaacatataatcaac
tttctccataatggatcttcaaggaaccgggagaagggaatggtggactttgactggcgg
aacatcttcagtgctgtagaccaagttctgcatttgctcagtcagtatttggagtgtttg
accttggataaattcgaaggttatcatgatgaaactcaactgactcgtcaagccctttat
cttctggaggaaaacaaattatgggctgctgtggtttttccagacttagaacctacagcc
agcaatctcccaccacacgtgacatacaagatccgaatggacatagactcagtggagaaa
acaaacaaaatcaaagacaggtactgggatcctggtccaagagctgatcctgtggatgat
ttacgttatatctggggaggctttgcatatctccaggacatgattgagcatgggattata
aagacccagaccagcgctgaagttccattgggaatttatctgcaacaaatgccatatcca
tgttttgtggatgatgtcttcatgatcacgttaaaccgcgcctttcccatcttcatggtg
ctagcttggatatattcagtctccatgactgtgaagagtatagtgctggagaaggaaatg
cgcctgaaagaggctatgaagaacaggggcatgaccaacggcgtgatttggtgcacttgg
ttcctagacagcttttccatgatggctgtgagcacatgcctcctcacagctctgattatg
tatggacaagtgctgcattatagcaatccacttctcttctttctattcctactgacattc
accacagccaccataatgcagtgtttcttgttcagcaccttcttttccaaagcaaatctg
gcagctgcctgcagtggagtcatctacttcaccttgtacctgccccacatcatctgcttt
gtctggcaagaccgtctgactattaatctgaagatcctagcaagttttctttctcaagta
gcctttgggtttggtacagaatacttgtcacgctatgaagaacaaggtcttggcctacag
tggggtaacatcagaaccagtcccttggaaggagatgaatatagtttccttttttccatt
aacatgatgctttttgatgcttttctctatggaatacttgcctggtatctcgataatgtt
tttccaggggactatgggttaccacagccttggtatttccctgtgctggaatcctattgg
cttggctccagaagcccagaagctgagaaaacagcaactgctgatgcaggtaatttaaat
accttctttgagcctgagccaacgggactgattccaggagtatgcattcagaacctggtg
aagatttttgtgaacaggcccaaaccagcagtagatgggataaatattactttttatgaa
ggtcagatcacagccttccttggtcacaatggagcaggaaagacaactaccatgtcgata
ctgacaggcctcttcccacccacatctggaactgtgctggttggtggcctggacatccaa
actcacatggactccattcggcacagattagggatgtgccctcagcacaacatcttattc
aatcaccttactgtagcagagcacatcttgttttattctcaactgaaaggaagatccagg
gaagaagctgagcaagagctggaaacaatgctggaagacatgggtctcacccataaaaga
aatgaagaagctcagaatttgtcaggtggaatgcaaaggaaactgtctgttgccattgct
tttgtgggtgaagcaaaagtggtagtcttggatgaacccacttctggagttgatccatat
tccaggcgatctatctgggatcttctgctgaaatatcgcccaggcagaactattatccta
tcaacccatcatatggatgaggcagacatccttggagacagagtagccatcatatcccaa
gggaaactcttctgctcgggctctcctgtattcctaaagaactgttttggctctggcttt
tatctcacccttgttcgcaagatgagaactacaaaaatgggaagggctacatcattttgt
agctgtggatctcagtgctcctgctcctgctccagctgtgtgcacaggggtgaagaagga
gctccagagctggaactggatggagatctaaatgagctagcagaagtaatccaccatcat
atcccagaagcaaaattgattgaaagcattggtcaggaactcatttatcttttgcccaat
aaaaactttaaacagcgatcttatgccagtctcttcagagaactggaggaaacattggat
gacttgggactcagcagttttggagtttcagacactccacttgaagaggttttcctaaag
gtcacagcagaagctgaccctgaaatgcaaaaaacaggagatactcaagaaaatggttct
gctcttgacaaaactcctattgagaacaaaccagctgaacaaaccaccctgaaaactaat
gacatttctcgaatgccagtaggcagagcaggagatcaaaatgaaggcaaagggtcccga
cagtataaaggctttcagcttgtacatcagcagatcaaagcactgctcatcaaacgcttc
caccacgcctcccgcagctacaaggacttcctagcacaggttgttcttcctgctagtttt
gtgttgctgtctctagtacttacagtcattattcctccatttggagaatatcctgcctta
acattacatccttggatctatggacaacagtttactttcttcagcaatgaacgtcctggc
aatgagcatatggtctcccttactcatgctttcttgaataaaccaggatttggaattcgc
tgcatgaagaatcagcctcttttgagcttcccatgcaatcatatgccaactgcctggaac
actcctgctgttcatcctaacctaagcagcctcctggggagccaggagtggagccctgag
aatccatcaccttcctgcaagtgcagcactcacaagaaactcactatgctgccagattgc
cctgctggtgcaggaggcctcccaccaccacagagagtgcaacgcagcacagaaattctt
caagacctgacccacagaaacatttcagattttctggtgaaaacatatcccactttgata
aaaggaagcttgaagagtaaatactgggtcaatgagcagagatatggaggaatttctata
ggaggaaggcttccagtccttcatgtttctggagatcaaattgtcaattttttcagtgat
cttggccgaatgatgaatgtgacaggagggcaagcttcactggctgctgctaaagaaatc
cctgatttccttaaatacatggaaactgaagataatattaaggtgtggtttaacaataaa
ggctggcatgctatagttagtttcctcaatgtagccaataatgcaatcctcagagctaat
ctgaggactggccaagaccctgaggaacatgggatcactgctataaaccatcctctgaac
ctcaccaaggagcaactctctgaagtcactgtactgaccacttcagtggatgctgttgtt
gccatctgtgtgatttttgccatgtcctttatcccagccagttttgttttatacctgatc
caagaacgtgtaacaaaagccaaacatctccagtttgtcagtggtgtgagccctgttacc
tattggctaactaacttcatgtgggacatagtgaattatgcactgagtgctgggatggtt
gtggctatttttgttggattcaacaagaaagcatacgcctcccccaccaatctccctgtg
ctcgttgccttgctgctcctgtatggatgggcagtaattcccatgatgtaccctgcttct
tctttcttcagtgtccccagcactgcttatgttgcgttgtcttgtattaatctctttgtg
ggaatcaacagcagtgccattacattcatcctggaattatttgaaaataagtctttgctg
aaatttaataaaacattgaaaaatgtgctgcttgtcctgccacatttttgcttaggccgt
ggactcatcgacttggccatgaaccaagctgtgactgaagtatatgcgaggtttggtgag
gagcatgtttctgatccctttcagtggaacttcgttggaaagaacctagttgccatggct
cttcaaggagttgtgttcttctttctgaatctctttatgcagcaccgtttgtgctccaca
agatggtttgctgagactgacatgtcacctattattaatgaagatgaagatgttgcagaa
gaaagaaaaagaattatgaatggaggaaacaaaacagatatcttacaattacaagaactg
accaagatttatgcaggtcgacacaagcctgcagtggacagactctgtgttggcatccgt
cccggagagtgctttggccttttgggagtgaatggcgctggcaaaacaacaacattcaaa
atgctgactggagatactgatgtgacatctggagatgctgtagtggctggcaatagtata
ttgacccacatttctaatgtccatcaaaacatgggatactgccctcagtttgatgccatt
gatgacctgctcacgggacgagaacacctctatttgtatgcacgcttgcggggggttcca
gcagaagaaatcaagagggttgctgaatggggcatccagaagctgggacttcctatgtac
gcagaccagctggcagggacctacagtggtggcaacaagcgcaagctctccactgccatt
gccttgataggctgcccaccactcatcttgctggatgaaccgactactgggatggaccct
cagtcccggcgcctcctgtgggactctatcgttggtgtgctcagagatgggcgagcggtg
gttctaacctcacacagcatggaagaatgtgaagccctctgtactcgtttagccatcatg
gtacaaggtaccttcaaatgcctaggcacaattcaggagctgaaatacaagtttggagat
ggctacattgtcactctgaaaatcaaagctccaaagtctgggctgcctccagatcctgct
cctgctgagaaattcatacgcatcaacttcccagggagtttacagcgagagaaacactac
aacatgctgcagtatcagatttgttcttcctctctggctaagatttttcgattaataatc
tccaataaggaaaatttgcatattgaagaatattctgtgtctcaaacaacattagatcag
gtttttgtgaactttgctaaacagcagatggaggatgaggaaatgcctttgcatccgcgt
gcagctggagccagccgagaagccagggtgtccccagttgcagtcgcatag
DBGET
integrated database retrieval system
