KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102106323
Entry
102106323         CDS       T02921                                 
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04382  Cornified envelope formation
phi04510  Focal adhesion
phi04512  ECM-receptor interaction
phi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:phi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102106323 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102106323 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102106323 (COL4A5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    102106323 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phi04147]
    102106323 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:phi00536]
    102106323 (COL4A5)
Exosome [BR:phi04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   102106323 (COL4A5)
Glycosaminoglycan binding proteins [BR:phi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102106323 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 102106323
NCBI-ProteinID: XP_014114235
LinkDB
Position
Unknown
AA seq 1662 aa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NT seq 4989 nt   +upstreamnt  +downstreamnt
atgtctttaaaggcttgccatggatgtacatctttatccaaatgtgattgcagtggtgtg
aaaggtgaaaagggcgaaaggggatttccaggcttggaaggacaaccaggtttgcctgga
tttccaggagcagaaggaccaccaggtccaagaggctcaaagggtgatgatggtcttcca
gggcctattggacccaaaggaatcaggggaccaccagggcttcccgggtttccaggaaca
ccaggacttcctggattgccaggacaagatgggccaccaggaccccagggtatcccagga
tgcaatggaacaaagggagaacgtggattcccaggcagtccaggttttcctggtttacaa
gggcctcctggaccccctggtctgccaggtatgaagggtgaagcaggtgaaataattaca
tccttgctgccaggacagaaaggtgacccaggatttccaggtcttccaggcatacctggc
ccaccaggctccatgggaataccaggtccaattggccctccagggcccccaggtttgacg
ggatctcctggtccaccagggctgccaggacccaagggtaatatgggtttgaatttccaa
ggacccaagggtgaaaaaggtgaacaaggtcttcagggacctccagggccaccaggacaa
attggagaacagaaaagaccaaatgacattgagtttcagaaaggagatcagggtattcca
ggtgatccaggcccaccaggacttcctgggccaccaggtcctcctggtcttcctggtggt
gtaaaaggtgaaaaaggtgagcaaggagaaccaggcaaaagaggaaagcctggcaaagat
ggagaacctggtcagcctggtagggatggtttacctggtgggcctggcataaatggtgct
ccaggaagagatggagaaaagggtgaaaaaggtgacatgggtccccctggtcctcctgga
attgttattccaaggccaggcattggtgcaacagtgggaccaaaaggtagcaaaggattg
ccaggacttccaggagccaaaggagagcgtggattctctggtaggccaggcccacctggc
ttcccaggatctccagggatcactactgttggacctcccggcccacctggcttacctggt
gagagaggacagaagggagatccaggtttacctggtgtttctattcctgggcaaccagga
gttgagggaccacaaggacctccaggaccaccaggtcccccagggccacctgcaccatct
gttgctcctggtaaagagttatgtgagcaagggccaccaggtcctccaggaattcaagga
caacaaggttttacaggggaacgaggccaaaaaggtgatcgaggagacacatgcttcaac
tgcataggaactggagtaactggtcctcctggggagagaggaccaccaggacctccgggt
agtccaggttctcctggctttcctggaccaaaaggtgaaaagggtcttcctggattaact
ggccttgtagggccaccaggctttccaggcatcccaggtgctcctggtagacctggtcct
aaaggagacccaggggatgtcttgacttctccaagaatgaaaggtgacaaaggagaccct
ggcctcccaggacctccaggcctccctggcatagatggcactcctggacgagatggactg
ccaggtttgcctggccctaagggggaacctggtagtattgcattcaaaggagaaatgggt
attccaggtaaaccagggataccaggccttcctggagaaaaaggccttcctggacctcct
ggttttggtccacaaggctcacctggtgaaaagggcatccaaggtgtatccggccgtcca
gggcctcctggtgttccgggtccaaaaggtgaccctggccagactattacagaaccagga
gttcctggtccccctggtcctccaggaagaaatggtgatccaggtcttccaggagatcct
ggtcagccaggtcagcgtggtttacccggcatcccaggtgcaaagggagagccaggtatt
cctggtattggacttccaggtccaccaggcccaaagggtttcccagggactccaggccca
cctggagctccaggaactccaggtcaccctggtctggatggacctcctggaccacctggt
ctcccaggacagaagggagatcgtggatttggagttccaggaccacctgggcccccagga
cccccaggcataaaaggagttcaaggacctaaaggtgatcctggcttcccaggaaaccct
ggtctccctggccgagcaggctttgatggaacccctgggcccaaaggtgaccctggacca
agtggaccaccaggacttccaggcccaccaggcatccctggcattggtggtcaaggtcct
cctggatctccaggacctccaggtcctgttggccccccagggttgcaaggcattccaggg
gagaaaggggatccaggtcctccaggcttcgatattcctggccctccaggtgaccaagga
gctccgggatatccaggaccccctggaataccagggcctaagggttcacctgggccacct
ggcagggatggaatacctggatttccaggtgccaaaggtgagatgggcgtcatgggagct
cctggtcttccagggcctccaggaactcctggaagaaatggcctgcctggcttgaaaggt
aatagtggattacctggtccaccagggcctcctggaccaatggggcagaaaggcgtcaaa
ggtgaagcaggtctgccaggtccacccggaacaattgatcccaaacagctgggagcaaaa
ggagaaaaaggcgagccaggtgttccaggtattcctggtttatcaggccagaaaggttat
caaggtctcccaggtgacccaggcccaccaggacttcagggcccaccaggtgtgccagga
ttgccaggtaccaagggagatacggggcttcctgggcagccaggaccaacaggacctcca
ggattaaaaggagctatgggagagatgggccttccgggtgcgcctgggcttaaaggcagc
caaggagtagcaggacgtccggggcagcctgggcctgtgggatttcctggactgaaaggg
gagaaaggtgatcctggtctttcaagcattggtatccatggtccccctggaccaaaggga
gatcgtggcttgcctggatacccaggtagtccaggctctaaaggtatagctggaaatcct
ggtttgcctggattttcaggcagtccaggtgcaaaaggagaaccaggccttcctggattc
ccaggaacaccaggaattccaggaccaaaaggtattgagggccctccaggcactcctggc
ctgcctggaccacctggaccagtaggtgatattggtcatcctggtcctcctggtccttca
ggagaaaagggacaacctggtcgagatggtatccctggaccagcgggtcagaagggtgaa
ccaggtctaccaggttttgggcatccaggacccccaggactcccaggattgtcagggcaa
aaaggagaactggggttacctggcccaccaggaccccctggacttccaggtctgaaggga
gaaccaggtttccagggattccctggtctgcagggtccaccaggtccaccaggaatacca
gggccacctctggaaggtcctaagggtagccctggcccaccaggtgttccaggaaggcca
ggtccaccaggcccagaaggtccacgagggccaccaggcagtggaggacttaaaggagaa
aaagggaacccaggtccacctggtccagctggcctgattggtccaaagggagatcaagga
ccacctggacgccagggggatcctggtcgtccaggtctgaatggaatgaagggtgacccc
ggggttccaggcgttccaggattcccaggtatgaagggtcccactggacctgcaggacct
gctggcctcacaggcagccagggactgccgggcccaccaggtccaccaggtttaccaggt
accattggacgaagcattgttgtcaaaggtgatcctggttccccaggtcctccaggacag
cctgggtccaaagggccacctggattgccagggccacagggattgccaggtccaattggt
cttcctggtgacccagggagagatgggcttcctggttttgatggtccagcaggacgaaaa
ggagagagaggtcttccaggccaaccaggttcacgaggaatacaaggacctcctggtcct
gatggcttacaaggcccacctggtcctcctggcacaccttctcttgctcatggattcctt
ataactcggcacagccagaccagcgatacaccactatgcccacaggggacatcaagaatt
tatgatggattctctcttctatatgtgcaaggaaatgagagagcacacggccaggatttg
ggtactgctgggagctgtcttagacgtttcagcaccatgcccttcatgttctgcaacatc
aacaatgtttgtaactttgcatcaaggaatgactattcctactggctgtcaaccccggag
tcgatgccaatgagcatggagccactgactgggcaaagcatccagccattcattagccga
tgtgttgtgtgtgaagctcctgctatggtgatagctgtccacagtcagaccattcagatc
ccttcatgtcctccaggctgggactccctctggattggctactctttcatgatgcacacg
agtgctggagcagagggctctggacaggccttggcatcgcctggatcctgtttggaagaa
ttccgctcagcaccgttcatcgaatgccatggtcggggcacctgtaattattatgccaat
tcatacagtttctggctggcaactgttgaggtctcagaaatgttcagcaaacctcagtca
gagacactgaaagctggagacttgaggacacgtattagtcgttgtcaagtttgcatgaag
aagacgtaa

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