Pseudopodoces humilis (Tibetan ground-tit): 102106458
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Entry
102106458 CDS
T02921
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03022
Basal transcription factors
phi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102106458
09124 Replication and repair
03420 Nucleotide excision repair
102106458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102106458
03400 DNA repair and recombination proteins [BR:
phi03400
]
102106458
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102106458
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102106458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
102106458
NCBI-ProteinID:
XP_014114207
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNSKKHVTALKKAVDMNCSGEPSLYNSLNLAMQTLKHMPGHTSREVLVVLSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDEGHYKELLMHHVSPPP
ASSTSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSDPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYKGERYCQGCQGEIKDQNVYIC
KVCQNAFCVECDLFVHDSLHCCPGCIHEHPAPVSV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaacccgagcggaccaagcgctgggaaggaggctacgaaagaacatgggaa
attcttaaggaagacgaatccgggtcgttgaaagcaaccatcgaggacattctcttcaaa
gcaaagaggaaaagactctatgaacaccatggacaagtccggcttggaatgatgcgtcac
ctttacgtggttgttgatggatcaagaacaatggaggaccaagacttaaaaccgaacaga
cttacttgcactctgaagttactggaatattttgttgaggagtactttgaccagaatcct
attagtcagattggattaattgtaaccaagagtaaaagagcggaaaaaatgacagaactc
tcaggaaactcaaaaaagcatgtaactgctctgaagaaagcagtggatatgaactgcagt
ggagagccttctctatataattccctaaatttggccatgcaaactttaaagcacatgcca
ggacatacaagccgagaggttttggtagtcctcagcagtctgacaacatgtgatcctgcc
aacatctatgatctaattaagtgtttaaaagcagtaaagatcagagtgtccgtcatcggc
ttaagtgctgaagttcgagtttgtacagtacttgcccgagaaactggtggaacttaccac
gttattttagatgaaggtcattataaggaactgctgatgcaccatgttagtcctccacct
gccagttcaacttctgagtgctcccttattcgaatgggttttcctcagcatactattgct
tctctatctgatcaagatgcaaagccctcctttagcatggcgcagttggaaaataacagt
gacccaggtcttacactgggtggatatttttgtcctcagtgcagagccaaatactgtgag
cttcctgtggaatgcaaaatctgtggtcttacattagtgtctgcacctcatctggctcgg
tcttaccatcacttgtttcctttagatgcctttcaggaagttccactggaagaatacaag
ggggaacggtattgtcaaggctgccagggagaaataaaagatcaaaatgtgtacatatgc
aaagtgtgtcagaatgcattttgtgtggaatgcgatctgtttgttcatgattcactgcac
tgctgtcctggctgtattcatgagcaccctgctcctgtatctgtatga
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integrated database retrieval system
