Pseudopodoces humilis (Tibetan ground-tit): 102106846
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Entry
102106846 CDS
T02921
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03030
DNA replication
phi03410
Base excision repair
phi03420
Nucleotide excision repair
phi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102106846 (RFC1)
03410 Base excision repair
102106846 (RFC1)
03420 Nucleotide excision repair
102106846 (RFC1)
03430 Mismatch repair
102106846 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phi03032
]
102106846 (RFC1)
03400 DNA repair and recombination proteins [BR:
phi03400
]
102106846 (RFC1)
DNA replication proteins [BR:
phi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102106846 (RFC1)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102106846 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
BRCT_2
Rad17
AAA_30
AAA_5
AAA_16
AAA_17
RuvB_N
RNA_helicase
AAA_33
nSTAND3
AAA_18
AAA_7
TIP49
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
102106846
NCBI-ProteinID:
XP_014117552
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MDIRKFFGVVPPAKRQECETVKKSEKIKNGEGPSNGKKREKETKVNNSPSEDDSKQKRMK
KKRRIIYDSDSEEEVQSVKKSKKSPEKKAATSKLGKVLKQDPVVYISETDEDDDFANKRI
SLKPKENGMSATGRPGTNTVKKEEVKPQAKSKPLSPVKQTPTSALDFFGTRSVQRSEKKL
VASKRKEPSQSSDSTLDDEAIARQLQLEEDSELERQLHEDEEFARTLAMLDETPQKKKSR
KDTEGEQTVLSINSSPNTTAAGYKQSERVKATDSAGAAKNYSVKPQAKPEQLKGSHLSPQ
SSDGKKEVMAEKERGAQNSLSREKAASGKEEKTTPKKEKVSPKKTESVSPEDSEKKRNNY
QAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLECIERDEAKSLIERYGGKVTG
NVSKKTNYLVVGRDCGQSKCEKASTLGTKVIDEDGLFDLIRTMPGKKSKYELAAETEAKK
GESKPKKTPQKAEAGKRNFSPFKREADNKKYKSTPEKGDTFRSVKKETTAVQKLTNFRHQ
TVEEKGAPKPMGNLVSEVNEDGAERLLWVDKYKPVSLKAIIGQQGEQSCANKLLRWLRNW
HKNTFEDGQAKPSKTGSKDDGTGFKAALLSGPPGVGKTTTAALVCKELGYSYVELNASDT
RSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGKHVLIMDEVDGMAGNEDRGGIQELIGLI
RHTKIPIICMCNDRNHPKMRSLVHYCLDLRFQRPRLEQIKGAMMSIAFKEGLKIPPPAMQ
EIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTDASRAKKDIKLGPFDVVRKVFAAGEE
AARMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGNLKKHLVLLSRAADSICDGDIV
DRQIRSKQNWNLLPTQAIYASVLPGELMRGYMSQFPVFPSWLGKFSSTGKHDRIIQELAM
HMSLRTRTCKRTVNMEYLSYLRDALVQPLKDFGADGVQQAITFMDSYCLMKEDVENIMEI
SMWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLSSVKASKRQSGSAATLDLSEDLNV
EEIQSDEDEQDTVDSDAMIKQKKVKSSKLPKREKNEETTKKEGKRKQKTRHLE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaagttctttggtgttgtacctcctgcaaagcgacaagaatgtgagact
gtgaaaaagagtgaaaaaattaaaaatggtgaaggaccctcaaatgggaagaaaagggaa
aaagagactaaggtgaataattcacccagtgaagatgattccaaacaaaagcggatgaaa
aagaagagaagaataatctatgattcagattcagaagaggaggtgcagtcagtgaaaaaa
tccaagaagtcacctgagaaaaaagcagctacttcaaaacttggtaaagttctaaagcag
gatcctgttgtttatatttcagagacagatgaggatgatgattttgccaataaaagaatt
tccctgaagccgaaggagaatgggatgtcagcgactggtcgtccaggaacaaatactgtg
aaaaaagaagaggtaaaaccacaagctaaaagcaaacccctgtctccagtgaaacagact
cccacctctgcacttgatttctttgggacaaggagtgttcaacgctcagaaaagaaactg
gtggcaagtaaaaggaaagagccttcacagagcagtgacagcacactagatgatgaggcc
attgctaggcaactgcagcttgaagaagactcagagctggagagacagctgcatgaagat
gaagaatttgctagaactctggccatgttggatgaaacaccacagaagaaaaagtctcgg
aaagatacagaaggagagcaaacagtactgagcatcaacagcagccctaatacaacagca
gccggatataagcagtcagaaagagtgaaagcaacagactcagctggtgcagccaagaat
tactctgtaaagccacaagctaaacctgaacagttgaaaggttctcatttatccccacaa
tcatctgatggtaaaaaagaagtgatggctgaaaaggaaagaggtgctcaaaattcacta
tcaagggaaaaagcagcttcggggaaagaagagaagacaacaccaaagaaggagaaagtt
tctcccaagaagactgagtctgtaagtcctgaggactctgaaaagaagcgaaacaactac
caagcgtaccgaagcttccttaatcgtgagggtccaaaagcactgggttctaaagagata
cctcagggagctgaaaactgcttggagggtctgacatttgtaattacgggtgttctggag
tgtattgagagagatgaggccaagtctctgattgaacgctatggaggaaaagtaactggc
aatgtcagcaagaagacaaattacctggtggtggggcgagactgcggccagtccaaatgt
gagaaggcatcaactttaggtacaaaagttattgatgaggatggtctgtttgatcttatt
cgaactatgccaggtaaaaagtccaaatatgagctggcagctgaaacagaggcaaagaaa
ggggagtcaaaacccaaaaagacaccacagaaagctgaagctggaaaaaggaattttagc
cccttcaaaagggaagctgataataaaaaatacaagtctactcctgaaaaaggagatacc
ttcagatctgtcaagaaagaaaccactgctgttcaaaaacttacgaactttagacatcag
actgtagaggagaaaggagcccccaaacctatgggaaacttggtttctgaggttaatgaa
gatggcgcagagagattgctgtgggtagataaatataagcctgtatctcttaaagcaatt
attggacagcagggtgagcaaagctgtgccaataaacttctccgatggctcagaaattgg
cacaagaacacctttgaagatggacaagcaaaacccagtaaaactggaagcaaagatgat
gggacaggctttaaagcagcattactttctggtccacctggagttggtaaaactactaca
gctgctttggtttgtaaggagctggggtatagctacgtggagctgaatgccagcgacact
cgcagcaagaacagtctaaaggaagtagttgctgaatcacttaacaacaccagcatcaaa
gacttctgttctggtacatcttcatcagttagtgggaaacatgtattgatcatggatgaa
gtggatggtatggcaggcaatgaagacagaggagggattcaggagttgataggtttgatc
cgacacacgaagataccaatcatttgtatgtgcaatgatcgcaaccatcctaaaatgcgc
tccttggtccactactgtttggatcttcgttttcaaagacctcgtctagaacagatcaaa
ggtgccatgatgtctattgcatttaaagaaggtttaaaaattcccccacctgctatgcaa
gagataatcctggcagcaaatcaggacatcagacaggttttacataatcttaatatgtgg
tgtgcaaaagacaaatcactgacttatgatgaggctaaaactgatgccagcagagccaaa
aaggacatcaaactgggtccttttgatgttgtccggaaggtttttgctgctggagaggag
gctgctcgtatgtctcttatagacaaatcagatcttttcttccatgattattcgctagca
cctctctttgtccaggagaattatgtgcatgtgaaaccagctgctgctggaggtaattta
aaaaagcacttggtgctcttgagtagagcagctgatagtatatgtgatggtgatatagtg
gacaggcagattcgtagcaagcagaattggaatcttcttccaacacaggctatttatgca
agtgttctcccaggggagctgatgaggggttacatgtcccagtttcctgtctttcccagc
tggctggggaaattttcatctacaggcaaacatgatcgtatcattcaagaactggcaatg
cacatgagtctcagaactcggacatgcaagaggacagtaaatatggaatatttgtcatat
ttgagagatgcacttgtccagcccttgaaagactttggagcagatggtgtacaacaagct
ataacatttatggattcttactgcttgatgaaagaagatgttgaaaatatcatggaaata
agcatgtggggaggcaaacccagtcctttttcaaagctggatcccaaggtcaaagcagct
tttactcgtgcctacaacaaagaggcacatctgactccgtattcacttagttctgtcaag
gcatctaaaaggcagtcaggatctgcagcgaccttagatctgagtgaagacttgaatgtg
gaagagatccaatctgatgaggatgagcaggatactgttgacagtgatgcaatgattaag
caaaaaaaggtgaagtcttccaagctgccaaaaagagagaaaaatgaagaaacaacaaaa
aaagaaggaaaaagaaaacagaaaactagacatttagaataa
DBGET
integrated database retrieval system
