Pseudopodoces humilis (Tibetan ground-tit): 102107005
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Entry
102107005 CDS
T02921
Symbol
USB1
Name
(RefSeq) U6 snRNA phosphodiesterase
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phi03041
]
102107005 (USB1)
Spliceosome [BR:
phi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
102107005 (USB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
102107005
NCBI-ProteinID:
XP_014112584
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MKKQPAQFRAVKPPKGPIAALSARGVPSSYRAHLDEGRARSDGTCIRARRDTKLQPSPGA
TFPRTPREPWQDEPTGDATRPNGEGRLCPSQGRAIPTLAYRGLCAGTRVAASSSLTHPSV
GGGKRQPFRERGRERRGTFKLARRPTRHGPARSRRARAASGPRGAGAAGELAGHQQPPPP
QPAARPGPPLAAPHRAAPLTARGLRPEAFTAAAPGGPAVGSGAGGRCPPGAAPAPARRTQ
RAAAAAGPLTCGGRRPRRRQGRGLRAAPEPRAGVEVGAGMEQGREGRERAAGGSAAEGAE
RAGPGRPRRRRRRRGGRGGCCPLPGRAGNCAAAGSERGVPAGAAAMSAALVGYSSSEEEE
EQEQEEKGGRARGRRERAAFLLLFLVLTPLRSRSAGRPRLPAPAGLPGDLDPEEAVSDDS
SRHGGRVRGFPHERGNWATHVYLPYIAQEEFLELLELLVSRARTYVPSLAAMEEFHLSLS
QCVVLRYHWIEPFVRSLRERLAAFHRFFCVADQVKVYTNQNKTRTFIGLEVSAGHFQLLE
LVSEVDGVLEEFDLPTFYKDPSFHISLAWCVGDLSGRLEGQCLRELQDIVDGFEESAFLL
RIQWEQIRCKSGNKYFSFPLSVSAVFVASSRATSSLSCWLKKTVFVADSILAAGCAAVST
GGSSHHTVTNFADFFKRKKKINLQKP
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcaaccagcacagtttcgggcagtaaagccccccaaaggccccatcgcagcc
ctgtcggcacgcggggtgccctcctcctacagagctcaccttgacgaagggagggctcgc
agtgacggtacctgcatccgagctcggcgggacaccaaacttcagcccagcccgggcgcc
accttcccccgcacaccccgcgaaccgtggcaggatgaacccaccggcgacgcaacccgg
cctaacggggaggggagattgtgcccctcgcagggaagagcgataccaaccttggcttac
cgagggctctgcgcggggacccgcgtcgccgccagttccagcctaactcatccctccgtg
ggaggtgggaagcgacaaccatttagggagcgcggtcgggagcgcagaggtactttcaaa
ctggcgaggcggcctactcggcatggcccggcccgctcccgccgggcccgggccgcctca
gggccgcggggcgcgggggcggccggggagctcgcaggccaccagcagccgccgccgccg
cagcccgcggccaggcccggcccgccgctcgccgctccccatcgggcggccccgctgaca
gcgcggggactgcgccccgaggccttcaccgccgccgcgccgggaggccccgcggtgggc
tcgggtgcagggggacgctgcccgcccggggccgcccccgccccggcgaggcgcacacaa
agggcggcggcggcggccgggccgctcacctgcggcgggaggaggcctcgccggcggcag
ggccgcggcctgcgcgctgcgcccgagccccgcgctggcgtggaggtgggagccgggatg
gagcaagggagggagggaagggagcgagcggcgggcgggagcgcagcggagggagcggag
cgggccgggccggggcggccgcgccggcggcggaggaggcggggcgggcgcggcgggtgc
tgccccctgccgggccgcgccggcaactgcgcggccgcggggagcgagcggggtgtcccg
gcgggagcggcggccatgagcgccgcgctggtggggtacagcagctccgaggaggaggag
gagcaggagcaggaggagaaaggggggagagcgcgcgggaggcgggagcgcgcggccttc
ctcctcctcttcctcgttctcaccccgctccggtcccgcagcgccggccgcccccgcctg
cccgcgcccgccggcctgccgggagacctagacccggaggaggccgtgagcgatgacagc
tcccggcacggcggccgcgtgcgcggcttcccccacgaacggggcaactgggccacgcac
gtctacctgccctacattgcccaggaggaattcctggagctgctggagctgctggtgtcc
cgcgcccgcacctacgtcccgtcgctggctgccatggaggagttccacctgagcctctcg
cagtgcgtggtgctgcgctaccactggattgagcccttcgttcgctccctcagggagcgc
ctggccgccttccacaggttcttctgtgtggctgaccaagtgaaggtttacaccaaccag
aacaaaaccaggactttcattggcttggaggtctctgctgggcatttccagctgctggag
ctggtgtcggaggtggatggagttctagaggaatttgaccttcccacattctacaaggac
ccatcattccacatcagcttggcctggtgcgtcggggacctgtctggcaggctggaaggg
cagtgtctgcgggaactccaggacattgtggatgggtttgaggagtcagcattcctgctg
cgtatccaatgggagcaaatccgctgcaagtcagggaacaagtacttctccttccctttg
agcgtctctgcggtgtttgtggcctcaagtcgggctacttccagtttgagctgctggctg
aagaaaactgtgtttgtagcagattccatcctcgctgctggatgtgctgcagtcagcacc
ggtggttccagtcatcacacagtcactaattttgctgatttttttaaaagaaagaaaaaa
ataaatcttcaaaagccatag
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