Pseudopodoces humilis (Tibetan ground-tit): 102107096
Help
Entry
102107096 CDS
T02921
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X2
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102107096 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phi01009
]
102107096 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102107096 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
phi03029
]
102107096 (RB1CC1)
Protein phosphatases and associated proteins [BR:
phi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102107096 (RB1CC1)
Membrane trafficking [BR:
phi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
102107096 (RB1CC1)
Mitochondrial biogenesis [BR:
phi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102107096 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
102107096
NCBI-ProteinID:
XP_005517224
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLESSPEYGGTESEETEDGKSA
ELVLYPDVSKVNSKSMLASFCKSVEHSALEGTDPVNVKDDKESGQSATVQDNEMSVELKD
DQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQNM
KAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQ
LMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTEL
LERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESFG
KLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLRV
PILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMEST
TGTAIATSSKTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALKQ
GSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSRR
MQDTSSCVKDVSVENASLSVCVEKCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSNS
LKCTSLEIVNTIEKVKLSLEKTLNDKHQNELQSLKSEYETKINKLLEDGEENKKKIKKLK
GDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMKTQNSEIKELRQSRE
IVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLDK
LKKENQHRLEQMQESHEVVMQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMKL
LLEESRNQQQETLKSQIDKETESLRKEIDKLNNKIQISSDEYQVGLSELRTLMTIEKDRC
ISELVNIHEAESNLLRTELNKVTLLHQKTAEAEKRLSEQITELQSKLELEMSALEKEKTE
KLSLSEQQEKYEAIIHKLKEEKELLVSNQEQDRQLLIQKLNCEKEDAVQTACKEFELQRE
AAEKGLLEKIQQLEMQVNRSPPAESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNEE
MQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDRA
RLLEEKKKLEEEVNKLRSSNFSPSTYLAAASEVCGACAADVPTDTDRLVADFGAEGRMDS
TMETSMMAVHENLHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIA
IRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPASGASRRPWVLGKVM
EKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttgttcaacaaagaaatgatcttg
tgtgagcgtccaccagctatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgccgtgtttcatacagtagcatcacgaacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgcgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acatactcttaccaaaaactgcttttcaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gagtcttcacctgaatatggaggaacagaaagtgaagaaactgaggatgggaaatctgct
gaattggtgctttatcctgatgtatctaaagtgaacagtaaatcaatgttagcatcattt
tgcaagtcagttgaacattcagctttggaaggcacagatcctgtaaatgtaaaagatgat
aaggaatctggtcaaagtgctactgtccaggacaatgaaatgtcagtagaattgaaagat
gatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagacctaat
gatgttgaatccctggtcagaaaatgctttgattccatgagcaggcttgatccaaggatc
atccaaccctttctggcagaatgtcgccaaactatcgccaaactagataatcagaatatg
aaggctattaaaggtcttgaggatagactctatgcattggaccagatgatagcaagctgc
agcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaagaga
gctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaatcag
ctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtaccact
gccaaacaggagcttgcaaataatctgcaagtcagactgaagtggtgttgttttgtgatg
cttcatgctgatcaagatggagagaaactacaagcactgcttcgtcttgtaacagagctc
ctagaaagggtcaaagttgtagaggctctcagcactgttcctcagatgtactgtttagct
gttgttgaggttgtgaggagaaaaatgtttataaaacactacagggagtgggcaggtgct
ttaataaaagatgggaaacatctgtatgaagctgaaaaggcaaaaagggaatcttttggt
aaactctttaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctggcct
ccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctcgttg
agtgacttgcagtttttgcagtctttctgtccttcagaagtacagccattactcagggtt
cccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctggtc
aaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaacaa
aaggcctccaatagtcaagcatcgccacaatctgctaccacaccaaggatggaaagtact
acaggaaccgcaattgctacctcttcaaaaactcctccatcactcagtcttcagggtccc
ctgtgtcctcctgtgtgtcccccagctccattagaagaattgtctccagacagcattgat
gctcacacatttgattttgaaactattgcccatccgaacttggagcaagctcttaagcaa
ggatcattagacttggattcactagctgagagtccagaatctgactttatgtcagcagta
aatgaatttgtaatagaagaaaatccagtgtctcctaatgtaataagtgacccacaaagc
ccggagatgatggtggagtctctttattcttcagttatcaatgcaatagacagtagacgt
atgcaagatacaagttcttgtgtaaaggatgtttcagtagaaaatgcttctctcagtgtt
tgcgtggagaagtgtagggttattgctcaagactcaaaggtacatttaagaggtataaag
gaagatctttgccatttcagaacacttgtacaaagagaacagtgtgacttttctaattcc
ttaaaatgtacttccttagaaatagtaaatacaattgaaaaggtaaaactttcacttgaa
aaaacactgaatgataaacatcaaaatgaattgcagtctttgaaaagtgagtatgaaact
aaaattaataaattattggaggatggggaagaaaataaaaagaaaatcaaaaagttaaaa
ggtgacctgttaggccttgaggaagttcttcagaataagaatgatgaattcgcaatagta
aagaatgagaaagaagccgtagtttgccttcagaatgaaaaagaccagaaattacttgaa
ttggaatgccaaatgaagacacaaaattctgaaatcaaggagctgaggcagtcacgtgaa
atagtacttgaagacttgaaaaagcttcatgttgaaaacaacgagaaactacaactcctg
agagcagaacttgagagtttggagcaaagccatttaaaagaactggaaagcaacctacaa
gccaggcatttacaggaatttgagaaggtcctagctgagcacaaggactgtttggataaa
ttaaaaaaagagaaccagcatagacttgaacaaatgcaggaatctcatgaagtagttatg
caagagaaacaacaacaagtagaagagttacagctcaaggtttcagatctgtctgatttg
aggtgcaaactagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaagctt
cttttggaagaaagcagaaaccagcaacaagagaccttaaagtctcagattgacaaggaa
actgagagcttaagaaaggagattgataaattaaacaataaaatacaaatcagcagtgat
gaatatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcggtgt
atttctgagctagtaaatatacatgaagcagaatcaaatttgcttagaactgaattaaat
aaagtaactcttcttcatcaaaaaactgctgaggcagaaaaaaggctgtcagagcaaata
acagaactgcaaagtaagttagagttggaaatgagtgccctagagaaggaaaaaacagaa
aaattgtctctctctgagcagcaggaaaaatatgaagctattatccataagctaaaggaa
gagaaagaactgttagtatctaaccaagaacaagacaggcagttgctcattcagaagctt
aattgtgaaaaagaggatgcagtacaaactgcttgtaaagagtttgaattgcagagggaa
gctgctgaaaaagggcttttggaaaaaatacagcaacttgagatgcaagtgaatcggagt
cctcctgctgaatcatctgctgagtcaaacttagttgctgaacttcaggagaagcttcag
gaagaaaaaatgaagttcttagagcaacttgaagaacaagagaaaagaaagaatgaagaa
atgcagaacatcagaacatctctcactgcagagcagcagaccaactttaacactgttctg
gcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaagtg
cttacacagcagcaagaaaaagataaggatttgattgaaacactttctgaagatcgagct
cgcttacttgaagagaagaagaagcttgaagaagaagtgaataaactaagaagtagtaat
ttttctccatcaacctacttagcagcagcatcagaagtttgtggagcctgtgcagctgat
gtgcccactgacacagacagattagttgctgactttggggctgaggggagaatggactcc
acgatggaaaccagtatgatggctgtgcatgaaaatcttcatatgtctgaagaaaagcag
aggataatgttgttagaaagaactttgcagttgaaagaagaggaaaataagagattaaat
cagagattgatgtcccaaagcatgtcgtcagtatcgtcaagacattctgaaaaaatagca
attagagattttcaggttggcgatttggttctcattatcttggatgaaaggcacgacaac
tatgtgttgtttactgtcagtccaaccttatatttcttgcactcagagtcccttgctgca
ttggatctcaaaccagcgtcgggtgcatctaggcgaccttgggtgctaggaaaagtgatg
gaaaaggaatattgccaggcaaaaaaggcacaaaacagattcaaagttcctttgggtaca
aaattctacagagtaaaagcagtaccatggaacaagaaagtataa
DBGET
integrated database retrieval system
