Pseudopodoces humilis (Tibetan ground-tit): 102107124
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Entry
102107124 CDS
T02921
Symbol
CACNA1B
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04010
MAPK signaling pathway
phi04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102107124 (CACNA1B)
04020 Calcium signaling pathway
102107124 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phi04040
]
102107124 (CACNA1B)
Ion channels [BR:
phi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102107124 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102107124
NCBI-ProteinID:
XP_005527380
LinkDB
All DBs
Position
Unknown
AA seq
2326 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAAIKKSKNDLI
HAEEGEDHFTDICSVGSPFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWVVL
CVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCF
DFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSI
ISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQILTGEDWNAVM
YHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEAT
NQKLALQKAKEVAEVSPMSAANISIAAKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYN
ELDPEERVRYATTLHIRPDMKTHLDRPLVVEPRSEGRNNITKLSPVDVQEVVEHPKSTSA
DGAEAPRKHHRHREKEKLGEQEKGDVTKDESGETGPANKEERHRQHRSRSKEVEGGSKEG
KSDRSRGQEGGKRHHRRGSVEEGAEKEHRRHRSHRHSSDRPGKEGNGTANGGRGERRSRH
RGGSRSGNRDGEPSAKGENGEEPHRRHRLRNRALSTYESVEKDSGEKEGEAGEKEHRNHQ
PKENQCELEASGSGSGPGSVPVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTV
NIPVTITAPPGETTVIPMNNVEFESKTEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIR
RLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVI
KMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLK
TIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEK
DCRGQYLDYEKNEVEAQPREWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYE
EQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACI
DFAISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYE
EMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAVSTD
NFINLSFLRLFRAARLIKLLRQGYPIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ
VFGNIALDDETSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNRACDPLSGLTKK
ECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYD
PAACGRISYTDMYEMLRHMSPPLGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMA
LIRTALEIKLASGGVKQHQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAA
LMIFDFYKQNKNSREQVQPPGGLCQPGPVSLFHPLKATLEQTQPAAFNNAKAFLRQKSSA
SLNNGGALPPPEGGIKESSSWGTQRTQDVFYETRSPAFERGHSEEIPIERVSKXAVVVEM
KEISPTVANGEPQPGLESQGRAASMPRLAAETQPIPDTSPMKRSVSTLTPQRPHAMHLYE
YSLERMPPEQGHHHHHHRCHRRKEKKQKSLDRAAHHLADGQAVAQSGESSKDKKQERGRS
QERKQHSSSSSEKQRFYSCDRYGSRDRAQPKSADQSRPTSPNGGPEHGPHRQGSGSVNGS
PLLSTSGASTPCRGRRQLPQTPLTPRPSITYKTANSSPVHFTTFQTPTFSPGRLSRGLSE
HNALLRGEQQPPPPAVARIGSDPYLGHRDASDSPQRAVPEDTLTFEEAVATNSGRSSRTS
YVSSLTSQSHQIRRVPNGYHYTLGLNSGPGARGRNYYHEADEDDWC
NT seq
6981 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctttggggatgatctgccaacccgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaagccggccaaaggatgtataaacagtcg
atggctcagagagccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagcgaataacagagtggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggaacaacatttgccggatggagacaagacaccgatgtcagag
agattggacgacaccgagccgtactttattggaatattttgttttgaagctggtatcaaa
atcatcgctctgggctttgtttttcacaaaggctcttacctgcgcaacggctggaacgtg
atggatttcgtcgtggtcctcacagggattctggcgactgctgggacagattttgacctg
cggaccctgcgagctgtgcgggtgctgcggccgctgaaactcgtgtcgggaatcccaagc
ctgcaggttgtcctcaagtccatcatgaaggccatggtgcccctgctgcagattgggctg
ctcctcttcttcgccatcgtgatgtttgccatcatcgggctggagttttacatgggcaaa
ttccataaaacctgcttttccaacgagacaggtgaggaggtgggggactttccctgtgga
gaggagcctcctgccaggcagtgtgagagcgggaccacgtgcagggagtactggcagggc
cccaactacggcatcaccaactttgacaacatcctcttcgctgtgctcaccgtcttccag
tgcatcaccatggagggctggaccgacatcctctacaacacaaacgacgctgcaggaaat
acctggaactggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcttatcaggtgaatttgccaaggagcgggagcgggtggagaaccgc
cgggcgttcctgaagctccgcaggcagcagcaaatcgagcgggagctcaacggatacctg
gagtggatcttcaaagcagaggaggtgatgctggccgaggaggacaagaacgcggaggag
aagtcccctctggacgtgttgaaaagagccgcaataaagaagagcaaaaacgacctgatt
catgcagaagaaggtgaggaccatttcacagacatttgctccgttgggtctccctttgcc
cgtgccagtttgaagagcggcaagaacgagagctcgtcctacttcaggaggaaagagaag
atgttccgcttcttcatccggcgcatggtgaaggctcagagcttctactgggtcgtgctc
tgcgtggtggccctcaacaccctctgtgtggccatggtgcactatgaccagcccgagaag
ctgaccactgctctctattttgcagagtttgttttcctggggctgttcctcactgagatg
tccttgaagatgtatgggctggggccaaggaattacttccactcttcgttcaactgcttt
gactttggggtgatcgtgggcagcatttttgaggtcatttgggccgcagtgaagccggga
acctcctttggcatcagcgtcctgcgagccctgaggctgctgaggatcttcaaagtgaca
aagtactggaattccctgaggaatctggtggtgtccttgctgaattccatgaagtccatc
atcagtttgcttttcctgctgttcctgttcatcgtggtctttgctctgctggggatgcag
ctcttcggaggacagttcaatttccaagatgaaactccaaccaccaatttcgacaccttc
cctgctgccatcctcacagtcttccagatcctgacaggggaggactggaatgctgtgatg
taccacgggatagagtcacagggcggcgtccactcgggaatgttctcctccatctacttc
atcgtcctcaccctgttcggtaactacaccctcctgaacgtcttcctggccatcgccgtg
gacaacctggccaacgcccaggagctgaccaaggacgaggaggagatggaggaagccacc
aaccagaagctggccctgcagaaggccaaggaggtggccgaagtcagccccatgtccgcg
gccaacatctccatagctgccaagcagcagaattcctccaaatccaagtcggtttgggag
cagaggacgagccagatccggatgcacaacttccgagccagctgcgaggccctgtacaac
gagctggaccccgaggagcgggtgcgctacgccaccaccctgcacatccgaccggacatg
aaaacacacctggaccggccgctggtcgtggagccccgcagcgaaggcaggaacaacatc
accaagctgagccccgtggatgtccaggaggtggtggagcaccccaaatccacctctgct
gatggggcagaagcgccacggaagcaccaccggcatcgggagaaggagaagctgggagag
caggagaagggagacgtgaccaaggatgagagcggtgaaaccgggccggccaacaaggag
gagcggcacaggcagcaccgcagccgcagcaaggaggtggaagggggcagcaaggaaggg
aaaagcgaccgtagcagggggcaggaaggggggaagaggcaccaccggcggggctcggtg
gaggaaggggccgagaaggagcatcgcaggcaccgcagccaccggcactcctcagaccgg
ccgggcaaggagggcaacggcaccgccaacggcggccggggcgagcggcgctcccggcac
cgcggagggtcccgctccgggaacagggatggagaaccctcggccaagggggagaacgga
gaggagccccaccggcggcaccggctcaggaacagggcgctgtccacctacgagtccgtg
gagaaggacagcggggagaaggaaggggaggctggcgagaaggagcaccggaatcaccag
cccaaggagaaccagtgtgagctggaggccagtggcagtggcagcggccctggcagtgtc
cctgtgcacaccctgcccagcacttacctgcagaaggtgcctgagcagcccgaggatgcc
gacaaccagaagaacgtgacgaggatgattcagccccccctggacaaaaccaccactgtg
aacatccctgtcaccatcactgcccctccaggggaaaccactgtcattccaatgaacaac
gtggagtttgaaagcaaaacagaggagaagaaagacgtcgatgacctgacgaaaaatggg
cctaaaccaatcctgccttacagctccatgttcatcctcagccccacaaatccgatccgg
cgcctgttccactacatcgtcaacctgcgctactttgagatggtgatcctgatcgtcatc
gccctcagcagcatcgccctggctgcagaggaccctgtccaggctgagtctcccaggaat
gatgctctgaaatacctggattatatatttacaggagtcttcacctttgagatggtgatc
aagatgattgacttggggctgctgctccaccctggctcctacttccgtgacctgtggaat
atcctggacttcattgtggtcagtggggccttggtggcttttgccttctcaggaaccaag
ggcaaggacatcaacaccatcaagtccctgcgagtcctgcgtgtgctcaggcccctgaag
accataaaacggctgccaaaactaaaggccgtctttgactgcgtggtgaactccctgaag
aacgtccttaacatcctcatcgtttacatgctcttcatgttcatcttcgccgtcatcgcc
gtgcagctcttcaagggccgcttcttctactgcacggacgagtccaaggagctggagaag
gactgcaggggtcagtacctcgattatgaaaaaaatgaggtggaggcacagcccagggaa
tggaaaaaatacgagttccactacgacaacgtgctctgggctctgctcacgctcttcacc
gtgtccacaggggaagggtggccaactgtgctgaagcactcggtggatgccacctacgag
gaacaggggcccagccctggctaccggatggaaatgtccatcttttatgtggtgtatttt
gttgtcttcccttttttctttgtcaacatctttgtggcgttaatcatcatcaccttccag
gagcaaggagataaagtgatgtcagagtgcagcctcgagaaaaacgagagggcctgcata
gactttgccataagtgccaagcccctgacccgctacatgcctcagaacaagcaatccttc
cagtacaagatgtggaaattcgtggtgtcccctccctttgagtattttatcatggtcatg
attgctctcaacaccattgtcctcatgatgaagttctatgacgctccagaagcttatgaa
gaaatgctaaaatgcctgaatattgtgtttacatccatgttttccatggaatgtgtgctg
aagatcattgcctttggtgtgctgaattatttccgagatgcctggaatgtctttgatttt
gtaacagtgttgggaagtattactgatattttagtaacagagattgcggtaagtacagac
aacttcatcaacctcagcttcctgcggctcttccgggcagccaggctcatcaaactgctc
cgccagggctaccccatccgcatcctgctctggaccttcgtgcagtccttcaaggccttg
ccttatgtgtgtctcctcattgcaatgctcttcttcatctatgccattattggcatgcag
gtatttgggaacattgccttagatgatgaaacctccattaatcggcacaacaacttccgg
accttcctccaagccctgatgctcctgttcaggagcgctacaggggaagcctggcacgag
atcatgttgtcctgcttgagcaacagagcctgtgaccccctctctggcctcaccaaaaag
gaatgtggcagtgattttgcctatttctactttgtgtcgttcattttcctctgctccttc
ctgatgctgaacctgtttgtggctgtcatcatggacaatttcgagtacctgacccgggac
tcctccatcctggggccgcatcacctggacgagtttgtccgggtgtgggctgagtacgac
cccgcagcctgcgggcgcatcagttacacagacatgtatgagatgctgagacacatgtcc
ccacctctaggccttgggaagaaatgcccagctcgtgttgcctataagcgcctggtgagg
atgaacatgcccatctctcccgaggatttaaccgtgcacttcacctccacgctgatggcc
ctgatccgcacggccctggagatcaaactggcctcaggaggtgtgaagcagcaccagtgc
gatgctgagctgaggaaggagatctcgctggtctggcccaacctgtcccagaagactctg
gatttgctggtgcctcctcacaaacctgatgaaatgactgtggggaaggtctacgcagcc
ctgatgatatttgacttctacaagcagaataagaacagcagggagcaagtccagccccct
gggggcctgtgccagcccgggcctgtgtccctcttccaccccttgaaggccaccctggag
cagacgcagcccgcggccttcaacaacgccaaggccttcctgcgccagaagagctcggcc
tccctcaacaacgggggagccctgccaccccctgagggaggaatcaaagagtccagttcc
tgggggacccagcgcacccaggacgtgttttatgaaaccaggagcccagcttttgagcga
ggccactccgaggagatccccattgagagggtgagcaaatgagccgtggtggtagaaatg
aaggagatcagccccacagttgccaacggagagccccagccaggcctggagagccagggc
cgggcggcctccatgccacgcctggctgctgaaacccagcccatcccagacacgagcccc
atgaagcgctcggtctccacgctgaccccgcagcgccctcacgccatgcacctctacgag
tattccttggagcggatgcctccggagcagggccaccaccaccaccaccaccgctgccac
cggcggaaagagaagaagcagaagtccttggacagggccgcccatcacctggctgatggc
caagctgtagcccagtctggagagtcttccaaggacaagaagcaggagcgtggccgctcc
caggagaggaagcagcactcctcctcctcctctgaaaagcagcgcttctactcctgcgac
cgctacggcagccgggaccgtgcccagcccaaatctgctgaccagagcaggcccacctcc
cccaacgggggcccagagcacggcccgcacagacagggcagtggttcagttaatgggagc
cccttgctgtcgacatctggtgctagtaccccctgccggggtcggaggcagctcccacag
actccactgaccccacgccccagcatcacttacaagaccgctaactcctcgcccgtgcac
ttcaccactttccaaacccccacgttctccccgggccgcctgagccgcgggctgtccgag
cacaacgcgctgctgcggggggagcagcagccgcccccgcccgccgtggcccgcatcggt
tccgacccctacctgggccaccgcgacgccagcgacagcccgcagcgcgccgtgcccgag
gacacgctcaccttcgaggaggccgtggccaccaactcgggccgttcctcgaggacttcc
tacgtctcctccctgacctcgcagtcgcaccaaatccgccgggtgcccaatgggtaccac
tacacgctggggctcaactcgggccccggcgcccgaggacgcaattactaccacgaagcc
gatgaggatgactggtgctag
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integrated database retrieval system
