KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102107142
Entry
102107142         CDS       T02921                                 
Symbol
PNKP
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:phi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102107142 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:phi01009]
    102107142 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phi03400]
    102107142 (PNKP)
Enzymes [BR:phi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     102107142 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     102107142 (PNKP)
Protein phosphatases and associated proteins [BR:phi01009]
 HAD phosphatases
  Other HAD phosphatases
   102107142 (PNKP)
DNA repair and recombination proteins [BR:phi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102107142 (PNKP)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase_6 HAD
Other DBs
NCBI-GeneID: 102107142
NCBI-ProteinID: XP_014117575
LinkDB
Position
Unknown
AA seq 514 aa
MRAELRGLAGPVPLPDGQPVLLGRGPLTGVTDRKCSRQQVEIVADYAEGTARVTQRGVNP
SSVGGSVLGRGGCGTLGPGQTLLLVNGRYPLVLHFEGSPLPKKRPASPPREPPPARRAPP
GPPRGGWQKRGPLLIFTPAGLRPSTKIAGFDLDGTLITTRSGKVFPTSPDDWRILYPEIP
KKLKQLQNEGYKLVVFTNQLGISRGRLRPEIFQAKVEAVTQQLGVALQVLVATGPGIYRK
PVLGMWDHLCEEANGDVTVSVPDSFYVGDAAGRPPNWAPGRKKKDFSCSDRLFALNAGLR
FLTPEEKFLGWAPAPFDLPAFDPRVLDPEAPPEPPKAELVSDRPEVLLTVGFPGAGKSTF
VKRQLIPAGYDLAQSEPRDTPGNPQDTLGSWQRCVSACSAALARGRPVVVDNTNPDPESR
QRFVSCAREAAVPCRCLQFTASLEQARHNCRFRDMTQSGHVPVTDAVLFSYKKHFVAPDL
SEGFSQILQIPFVPHFGDPPDPQRKRLFFQFSDG
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgcgggccgagctgcggggcctggccgggcccgtgccgctgcccgacgggcagcccgtg
ctgctgggccgcgggccgctcaccggcgtcaccgaccgcaagtgctcccggcagcaggtg
gagatcgtggccgactacgccgagggcacggcgcgggtcacgcagcgcggggtgaacccc
agctcggtgggggggtcggtgctgggccgggggggctgcgggaccctcggccccgggcag
acgctgctgctggtgaacgggaggtaccccctggtgctgcacttcgaggggtcccccctc
cccaaaaaacgcccggccagccccccccgggagccccccccggcccgcagagcccccccc
ggccccccccggggggggtggcagaagcggggacccctcctcatcttcacccccgcgggg
ctccggcccagcaccaagatcgcggggttcgacctggacgggaccctcatcaccacccgc
tcggggaaggtgtttcccaccagccccgacgactggaggattttgtaccctgagatcccc
aagaagctgaagcagctgcagaatgaggggtacaagctcgtggtgttcaccaaccagttg
gggatctcccgggggcggctgcgccccgagatcttccaggccaaggtggaggcggtgacg
cagcagctcggggtggccctgcaggtgctggtggccacggggccggggatctacaggaaa
cccgtgctggggatgtgggaccacctgtgcgaggaggcgaacggggacgtgacggtgtcg
gtgcccgacagtttctacgtgggggacgccgctggacgccccccgaactgggccccgggg
cggaagaaaaaggatttctcctgcagcgaccgattgttcgctctcaacgcggggctgcgg
ttcctgactcctgaggaaaagttcctgggctgggccccagcgccctttgacctcccggcc
ttcgacccccgtgtcctggaccccgaagcccccccggaaccccccaaggccgagctggtg
tcggacaggcctgaggtgctgctgaccgttggcttccctggggccggcaaatccactttc
gtgaagcggcagctgattcccgcaggatatgacctggcccagagcgagccccgagacaca
cctggtaaccctcaggacacgctgggctcgtggcagcgctgcgtctccgcctgctcggcc
gccctggctcggggccgccccgttgtcgtcgacaacaccaaccccgaccccgaatcgcgg
caaaggttcgtgtcctgtgcccgggaggccgcggtgccgtgtcggtgcctccagttcacg
gccagtctggagcaggcgcggcacaactgcaggttccgggatatgacacagagcggccac
gtccccgtcaccgacgctgttctgttcagttacaagaaacactttgtggcccctgacctc
tccgaaggcttctcccaaatcctccagatcccctttgtgccccattttggggacccccca
gacccccaacgaaagcgcctcttcttccagttcagcgatggatga

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