Pseudopodoces humilis (Tibetan ground-tit): 102107196
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Entry
102107196 CDS
T02921
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102107196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102107196
Enzymes [BR:
phi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102107196
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
HECT type E3
102107196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
102107196
NCBI-ProteinID:
XP_005530353
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT
MEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILLE
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYISLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVKHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQQ
LLDYPGEDVEETFCLNFTICRESYGVTEQKNLIEDGDKILVQKDNREEFVEAYVNYIFNL
SIQEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAVYKGDYTATHP
TVRMFWETFHAFPLEKKKKFLLFLTGSDRIPIYGMSSLRIIIQSTPSGEQYLPVAHTCYN
LLDLPKYSSKEILSARLMQAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggctactcgtcttatggacagcctgggataggtagcaacctccaggtc
atcattcctgagccacaggtatatgggttcatccacgatagaaatgtcaaggaggtggcg
tgtggaggaaaccactctgtgttcctgttggaagatggagaggtgtatacctgtggcttg
aacaccaaaggtcaactggggcatgactgtgaaggaagcaagccagagcaaatcggggct
ctggccgggcagcacattgtgcatgtggcctgtggggagtcgcacagcgtggccctcagc
gaccagggccagctcttctcctggggcgccggcagcgacggacagctggggctcaccact
atggaagatgcagtgacagtaccaaggttgataaagaaattgaaccaacagacgatactg
caggtttcctgtggaaattggcattgcctggctctggcagcagatggccagttcttcaca
tgggggcagaacagctatggtcagctgggcttgggcaaagaatgtccctcccaagccagt
ccacagcgtgtcaagtctcttgatgggatccctttggctcaggttgctgcaggtggagcc
cacagttttgccctgtctctctcaggggctgtgtttggctggggaaagaacagctcagga
cagctgggactaagtgatgaacgagacagagagtccccctgtcacgtgaagctgctgcgg
tctcagaaggttgtttacatcagctgtggagaggaacacacagcagtcctgacaaagagt
ggaggggtgttcaccttcggtgcaggttcctgtgggcagctgggccatgactccatgaat
gatgaggtgaacccccgaagagttcttgagctcatgggcagtgaggtatcccagattgct
tgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctgggaacagggcacacttgcaatgtaaagtgtccctctcct
gtcaagggtcactgggcagctcataatgggcaactctcagggaaacctgatgcctgtaaa
taccacattgttaaacatatcttctctggaggagaccaaacatttgtgctttgctccaaa
tacgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttacacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaataatgttgttcagatactgtcctcagctgcctgctggaatggaagcttc
ttggagaagaaaattgatgaacattttaaaaccagtccaaagatcccagggattgatctg
aactccacgagagtgctgtttgagaagctgatgaactctcagcactccattctcctggag
cagatactgaagagctttgaaagctttttgattcctcagctgtccagctctccaccagat
gttgaggcaatgagaatctatctgattctcccagaattcccaccattccaagactccaag
tattacatctctctgacacttcctttagcaatggctattttgcgcttggataccaatccc
agcaaagttcttgataactggtggtcgcaggtgtgcccaagatacttcctcaggcttgtg
gacctctataaaggtgcggtggtttacctcctcagtggaaggaagacgctgctgatccca
gtcctgttcagcagctacattacagctgctctcaggcttctggagaaactccacaaggtg
aatcagaaggttaaacatgtggaatatgataagttttatatccctgagatttccagtttg
gtggacattcaggaggattatctcatgtggtttttgcaccaggctggaatgaaagtaagg
ccatccatcatgcaggacgctgtgactctttgctcttaccctttcatcttcgatgctcaa
gctaagaccaagatgttacagacagatgcagaattacagatgcaggttgcaataaacggt
gcaaatttgcagaatgtcttcatgcttctcaccctggagcctctgctggccagaagccct
ttcctggtacttcatgttcgcaggagtaatttagttggtgatgctttaagggagttgagc
atccattcagatattgatttgaaaaaacctctcaaagtcatctttgatggtgaagaagct
gttgatgctggaggagtgacaaaggaatttttcctcctgttgttaaaagagctacttaac
cctatttatggcatgttcacttactacccagagtcaaacctgctgtggttttcagacacg
tgttttgtagaacacaactggtttcatttgattggcatcatatgtggtcttgcaatctac
aatttcacagtggtagaccttcactttcccttggctctgtacaaaaaactcttgaatgtg
aagccctgcctagaggatttgaaggagctgtcccctacagaaggaaggagtctccagcaa
cttttagattaccctggggaagatgtggaggagacattctgtttgaattttacaatctgc
agggaaagctatggtgtaacagagcagaagaacctgatcgaagatggagataaaatcctt
gtgcagaaggacaacagggaagaatttgttgaagcctacgtaaattacatcttcaacctc
tccatccaagagtggtacacggccttttctactggcttcctgaaagtgtgtggtgggaag
gtcctggaactcttccagcccactgagctcagggccatgatagttggaaacagtaactac
aactgggaggaactggaggagagcgctgtctataagggagactacactgccacacaccca
actgtgagaatgttctgggagaccttccatgcatttcccttggaaaagaagaagaaattt
ctcttgttcctgacgggcagcgaccgcattcccatctacggcatgtccagcctgcgcatc
atcatccagtcgacgcccagtggggagcagtacctgcccgtggctcacacctgctacaac
ctgctggacctgcccaagtacagcagcaaggagatcctcagcgcccgcctcatgcaggcc
attgaccactatgagggcttcagcttggcctga
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integrated database retrieval system
