Pseudopodoces humilis (Tibetan ground-tit): 102107278
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Entry
102107278 CDS
T02921
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03030
DNA replication
phi03410
Base excision repair
phi03420
Nucleotide excision repair
phi03430
Mismatch repair
phi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102107278 (POLD1)
03410 Base excision repair
102107278 (POLD1)
03420 Nucleotide excision repair
102107278 (POLD1)
03430 Mismatch repair
102107278 (POLD1)
03440 Homologous recombination
102107278 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phi03032
]
102107278 (POLD1)
03400 DNA repair and recombination proteins [BR:
phi03400
]
102107278 (POLD1)
Enzymes [BR:
phi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102107278 (POLD1)
DNA replication proteins [BR:
phi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
102107278 (POLD1)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
102107278 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
102107278 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
T3SS_needle_E
DNA_pol_B_exo2
RNase_H_2
DNA_pol_B_2
DUF3239
Motif
Other DBs
NCBI-GeneID:
102107278
NCBI-ProteinID:
XP_014118403
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
SLGLPPLRVLSLDIECAGRKGVFPEAQQDPVIAIAAVALRQGAREPFLRVVFTLLECAPL
RGATVRSFPCERELLQSWAEFVRIVDPDVVTGYNIHNFDLPYLIQRAQVLQVPSFPYLGR
VRGVPSQVKDSAFQSRQLGRREGKVVSTPGRVTLDMLQVLLREHKLRSYSLNAVSAHFLH
EQKEDVPHGIITELQNGDAQTRRRLALYCLKDALLPLRLLERLMTLVTLVEMARVTAVPL
SYLLTRGQQVKVVAQLLRQAMQEDFLLPVVKSEGGEDFEGATVIEPIKGYYDAPIATLDF
SSLYPSIMIAHNLCYSTLLSPGTAQRLGLGPEDFIRTPTGQLFVTPRVRSGVLPRVLQGL
LAARSRVKAALAQEQDPERRQVLDGRQLALKVSANSVYGFTGAQAGKLPCLEISQSVTGF
GRQMIERTKQLVENKYPDVQVYLPYLLISKKRYAGLCFAGSAEPRLDCKGLEAVRRDNCP
LAANLVTACLRRILLHRDPAGAVAHAQEVISDLLCNRIDISQLVITKELTRAASAYSAPQ
AHVALAERLRRRDPGSAPSLGDRVPYVIVSGARGQAAYTRSEDPVFALEQNLPIDTRYYL
EQQLSRPLLRIFEPILGEGRAQAVLLQGEHTRCKTLLTSKSGGLSAFTSKRSSCVGCRAL
LPHHGAVCDFCRRRESELYQKEVSQVWHLERSFSRLWSQCQRCQGSLLQDVLCTSRDCPI
FYMRRKVQKDLEAQQELLKRFGVPDW
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
tcactggggctgccccccctgagggtgctgagcctggacatcgagtgcgccggcaggaaa
ggggtgttccccgaggcgcagcaggacccggtgatcgccatcgcggccgtggcgctgcgg
cagggcgcgcgggagccgttcctcagggtggtcttcaccctcctggagtgcgccccgctg
cgaggagccaccgtcaggagcttcccctgcgagagggagctgctccagtcgtgggcggag
tttgttcggatcgtggatcccgacgtggtgaccgggtacaacatccacaacttcgacctg
ccctacctgatccagagagcccaggtgctgcaggtgccgtcgttcccgtacctgggccgt
gttcggggggtcccgtcgcaggtgaaggattcggcgttccagtcccgccagctcggccgc
agggaggggaaggtggtgagcacacctgggagagtcaccctggacatgctgcaggtgctg
ctgagggagcacaaactgcgctcgtactccctgaacgccgtcagcgctcacttcctgcat
gagcagaaggaggacgtcccccacggcatcatcaccgagctgcagaacggggacgcgcag
acgcggcgccgcctggccctgtactgcctgaaggacgcgctgctgccgctgcggctgctc
gagcgcctgatgacgctggtgacgctggtggagatggcgcgggtgacggccgtgcccctc
agttacctgctcacacggggacagcaggtcaaggtggtggcgcagctcctgcggcaggcc
atgcaggaggattttttgctgccggtggtgaagtcggaggggggagaggattttgagggg
gccacggtgatcgagcccatcaaggggtactacgacgctcccatcgccacgctggatttc
tcctcgctgtacccgtccatcatgatcgcccacaacctctgctacagcaccctgctgagc
cccggcaccgcccagcgcctcgggctgggccccgaggatttcatccggacgccgacgggg
cagctcttcgtgacgccgagggtgcggagcggggtcctgccccgcgtgctgcaggggctg
ctggctgcgcgcagcagggtgaaggcggcgctggcgcaggagcaggaccccgagcggcgg
caggtgctggacgggcggcagctcgcgctcaaggtcagcgcgaattccgtctacggattc
accggagcgcaggcgggaaaactgccctgcctggagatatcgcagagcgtgaccggcttc
gggcgccagatgatcgagaggacgaagcagctggtggagaacaaatacccggatgtgcag
gtgtacctgccctacctcctgatcagcaagaagcgctacgccgggctctgcttcgccggc
agcgccgagccccggctggactgcaaggggctggaggccgtcaggagggacaactgtccc
ctggctgccaacctggtgacggcctgtctgcgcaggatcctgctgcacagggaccccgcg
ggcgccgtggctcacgcgcaggaggtgatctcagacctgctctgtaaccgcatcgacatc
tcccagctcgtcatcaccaaggagctgacgcgcgccgccagcgcctacagcgccccgcag
gctcacgtggccctggccgagaggctgcggcgcagggaccccggcagcgccccctcgctc
ggggaccgcgtcccgtacgtcatcgtcagcggcgcccgcggccaggccgcctacacccgc
tcagaggacccggtgttcgccctggagcagaacctgcccatcgacacccgctactacctg
gagcagcagctgagccggcccctgctgaggatcttcgagcccatcctgggcgagggcagg
gcccaggcggtgctgctccagggggaacacacgcgctgcaaaaccctcctgacctccaaa
tccggggggctctcggccttcacctccaaacgcagcagctgcgtcggctgccgggcgctc
ctgccccaccacggagctgtttgtgatttctgccgccgcagggagtccgagctctaccag
aaggaggtgtcccaggtgtggcacctggagcgcagcttctcccgcctctggagccagtgc
cagcgctgccagggctctctgctccaggacgttctgtgcaccagccgggactgccccatt
ttctacatgcgccgcaaagtgcagaaggacctggaggcgcagcaggagctcctcaaacgc
ttcggggtgcccgactggtga
DBGET
integrated database retrieval system
