Pseudopodoces humilis (Tibetan ground-tit): 102107294
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Entry
102107294 CDS
T02921
Name
(RefSeq) putative RNA exonuclease NEF-sp
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102107294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phi03009
]
102107294
Ribosome biogenesis [BR:
phi03009
]
Eukaryotic type
Pre-60S particles
RNases
102107294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
EzrA
TMF_DNA_bd
DUF3958
RRM_YTH1
Na_H_antiport_3
Motif
Other DBs
NCBI-GeneID:
102107294
NCBI-ProteinID:
XP_005522992
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MAKGLCLNGRKRPGEAAEGPRAARKRRKADGGGPGLGREEKSCHLSAALLGEDSEISQDH
LYELLKYAALGKCHSAAQPSWCRIYHQSHLAGVVVVVLHEMSQLHFYRFYLQFKHLRKVF
RHRFTLAPSANFPVSLYGERTNLKSQNTPQGLTSTSSECIVKSSDLQCDPIIQRYGEKKK
GLTSYTLTLEEQKKNDYPIEGSPGCKGYISTECDQQRTDSSPLFGLDCEMCLTAKGNEVI
RVSLVDAQGQCLLNELVKPESTVVNYRTRFSGITKKMLLPVKTRLSDIQTRLKKMLPHDA
VLVGHSLNSDLQALEMIHPSVIDTSLLFARSEGRRFKLKFLAKAVLGKEIQCEQKLGHDP
TEDARAALELAQFFIEQGPTKVAELNLEMLLTAEKLAEVSQNKAALQPQGCGFQKQLNEP
LPLSKPCFLDCLQETGQKPLLLGRQGLDSSGLCQSNLSTSNKQILQRALEDVPLSKFSII
GFSLGPEYLASHLHAGLYEKVRSKLTDMLTIYAGPFDENFCMKSVKKEFGRCGPIQSLTV
VTETFQPYVCIQYEVLEAAQLAVESLNGAEVAGSCIKVQRPVTAAMLDCNVLIKELELDV
ENEGVIYVAGLKKSLTETDLQEEFSQLKDLETLFLPKDLQSGKHRNCCFLKFQKTQSAVD
ALEAINGWTMKGSKLRSRNALAPGHLWRWIWQMNHSNGKQGKHIFYEKMEQLSDSEQDLR
KKVKKLDNHIKKLYRSLQSNTLCVVLFPGVNSTNGSQSGLGLMGIKDDEGRSAC
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggggctgtgcctcaacgggcgcaagcggcccggcgaagccgcggaggggccg
cgggcggcgcggaagaggcggaaggcagatggcggcggcccgggcctgggccgcgaggaa
aagtcgtgtcatttgtcagcagctctgcttggcgaggactccgaaatcagccaggaccac
ctgtatgagctgctgaaatatgcagctctggggaaatgccacagtgcagcacagcccagc
tggtgccgtatttatcaccaaagccacctggctggggttgtggttgttgttctacatgaa
atgagccaactccatttctacagattctatttacagttcaagcacctcaggaaagtgttc
cggcacagattcacactagcaccttccgctaacttcccagtcagcttgtatggagaaaga
acaaacctgaaatctcaaaacactccacaaggtttgacttccaccagcagtgaatgcatt
gttaaaagctcagacttgcaatgtgatcccatcattcagagatacggagaaaaaaaaaaa
ggccttacaagctatactctaactttagaagagcagaaaaaaaatgattatcccatagaa
ggttcccctggatgcaaaggctacatctccacagagtgtgatcagcagaggacagacagc
agccctctcttcggtctggattgtgaaatgtgcctgactgcaaaagggaatgaagtcatc
cgtgtgtctttggtggatgcacagggtcagtgcctcctgaatgagctggtcaaacctgag
agcacagtggtgaactaccgcaccagattctctggaatcacaaagaaaatgcttcttcca
gtgaagacaagactgtcagacatccaaaccaggctaaaaaaaatgcttccccatgatgca
gtgttggtgggtcattctttaaattctgatcttcaggctttggaaatgatccaccccagt
gttattgatacttcactgctttttgccagaagtgaaggtcgaagatttaagctgaaattt
ctagccaaagctgttttagggaaggaaatccagtgtgaacagaaacttgggcatgatcct
acagaagatgctagagctgcattggaattagctcaattcttcattgagcaaggaccaaca
aaggtagcagaactaaacttggagatgcttctgacagctgaaaaactggctgaggtatca
cagaacaaagctgctctacagccacaaggatgtgggttccagaaacagctgaatgagcct
ctaccattatccaaaccatgttttttagattgtctgcaggagactggccaaaaacccctc
cttttgggcagacagggattagactcttctggcctgtgtcagagtaacctgagcacttca
aacaaacagattcttcagagagccttggaagatgttcccctatccaaattcagtatcatt
gggttcagtttgggtccagagtatcttgcatctcaccttcatgctggactttatgaaaag
gtgagaagcaagctgactgacatgctgacaatttacgcaggtccttttgacgaaaacttt
tgcatgaagtctgtgaagaaggaatttgggaggtgtggaccaatccagtcccttacagtg
gtaactgaaacattccagccatacgtctgtatccagtatgaagtgctggaagctgcccag
cttgctgtggaaagcctgaatggagctgaggtagcaggatcctgcattaaggtccagaga
ccagtcactgcagcaatgctggactgcaatgttctgattaaggaattagaactggatgta
gaaaatgaaggtgtgatttatgtggctggtctaaagaagtcattaacagagacagacttg
caagaagaattcagccagttgaaagacttggaaacactgttcctgccaaaggatcttcag
agtggaaagcacaggaactgctgtttcctcaaattccagaaaacccagagtgctgtggat
gcccttgaagctataaatggatggaccatgaagggtagcaagctaagaagtaggaatgcc
cttgctccaggtcacctctggagatggatttggcaaatgaatcacagcaatgggaaacaa
ggaaaacacatcttctatgagaaaatggagcagctgtctgactccgagcaggatctaagg
aaaaaggtgaagaagttagacaaccatatcaaaaagctttatagaagcctgcaaagtaac
accctgtgtgttgttctctttcctggagtgaacagcacaaatggatcacaatccggcctt
ggtctgatgggaataaaagatgatgaagggaggagtgcttgttaa
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