Pseudopodoces humilis (Tibetan ground-tit): 102107300
Help
Entry
102107300 CDS
T02921
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X2
KO
K10756
replication factor C subunit 3/5
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03030
DNA replication
phi03410
Base excision repair
phi03420
Nucleotide excision repair
phi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102107300 (RFC5)
03410 Base excision repair
102107300 (RFC5)
03420 Nucleotide excision repair
102107300 (RFC5)
03430 Mismatch repair
102107300 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phi03032
]
102107300 (RFC5)
03036 Chromosome and associated proteins [BR:
phi03036
]
102107300 (RFC5)
03400 DNA repair and recombination proteins [BR:
phi03400
]
102107300 (RFC5)
DNA replication proteins [BR:
phi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102107300 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
102107300 (RFC5)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102107300 (RFC5)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102107300 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
102107300 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_24
AAA_22
AAA_11
AAA_assoc_2
DEAD
AAA_14
ResIII
RuvB_N
DUF815
AAA_5
AAA_30
AAA_19
PhoH
DNAX_ATPase_lid
AAA_7
TniB
TIP49
ATPase_2
nSTAND3
AAA_25
Gp44_lid
Mg_chelatase
Thioredoxin_6
bpMoxR
AAA_28
NPHP3_N
Hydantoinase_B
AAA_3
Motif
Other DBs
NCBI-GeneID:
102107300
NCBI-ProteinID:
XP_005524560
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MAPAGSANLPWVEKYRPQALSELVSHRDILSTVQRFISEDRLPHLLLYGPPGTGKTSTIL
ACARQLYREREFGSMVLELNASDDRGINIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIQ
EEGVDVTEDGMKALVTLSSGDMRRALNILQSTSMAFGKVTEENVYTCTGHPLKSDIANIL
DWMLNQDFSSAYRKIMELKTLKGLALQDILTEIHLFVHRVDFPPSIRIQLLIKLADIEYR
LAAGTSEKIQLSSLIAAFQVTRDLVAAEA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggcgggcagcgcgaacctgccgtgggtggagaagtaccgtccgcaggcgctg
tccgagctggtgtcccaccgggacatcctcagcaccgtgcagcgcttcatcagcgaggac
cggctcccccatctgctcctctatgggccgcccggcaccgggaagacatccaccatcctg
gcctgtgccaggcagctctaccgggagcgggagttcggctccatggtgctggagctcaac
gcctccgatgaccgaggcatcaacatcgtccgagggcccatcctgagctttgccagcacc
aggaccatctttaagaaaggcttcaagctcgtcatcctggatgaagccgatgccatgacc
caggatgctcagaacgccctgaggagagtgatcgagaagttcacagaaaacacccggttt
tgcctcatctgcaactacctctccaagatcattcccgccctgcaatcccgctgcacccgc
ttccgcttcggccccctgaccccggagctgatggtgccgcggctccagcacgtcatccag
gaggagggggtggatgtgaccgaggatgggatgaaggctctggtgaccctctcaagcggg
gacatgcgcagggccctcaatattttgcagagcacctccatggcctttgggaaggtgaca
gaggaaaacgtttacacctgcacggggcatcccctcaagtctgacatcgccaacatcctc
gactggatgctgaaccaggatttttccagtgcctaccgcaaaatcatggagctgaagacg
ctgaagggcctggccctgcaggacatcctcaccgagatccatctcttcgtgcacagagtc
gacttccccccctccatccgcatccagctgctgatcaagctggcagacatcgagtaccgc
ttggctgctggcaccagcgagaagatccagctgagctccctcatcgccgccttccaggtc
accagggacctggtggcggctgaagcctga
DBGET
integrated database retrieval system
