| Entry |
|
|---|
| Symbol |
SKIV2L2
|
|---|
| Name |
(RefSeq) superkiller viralicidic activity 2-like 2
|
|---|
| KO |
|
|---|
| Organism |
phi Pseudopodoces humilis (Tibetan ground-tit)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:phi00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102107384 (SKIV2L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:phi03019]
102107384 (SKIV2L2)
03041 Spliceosome [BR:phi03041]
102107384 (SKIV2L2)
03009 Ribosome biogenesis [BR:phi03009]
102107384 (SKIV2L2)
03016 Transfer RNA biogenesis [BR:phi03016]
102107384 (SKIV2L2)
Enzymes [BR:phi01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102107384 (SKIV2L2)
Messenger RNA biogenesis [BR:phi03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
102107384 (SKIV2L2)
Spliceosome [BR:phi03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
102107384 (SKIV2L2)
Complex C
U4/U6.U5 tri-SnRNP related factors
102107384 (SKIV2L2)
Ribosome biogenesis [BR:phi03009]
Eukaryotic type
Pre-60S particles
Helicases
102107384 (SKIV2L2)
Transfer RNA biogenesis [BR:phi03016]
Eukaryotic type
tRNA degradation factors
TRAMP complex
102107384 (SKIV2L2)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
1034 aa
MAEAFGDELFSVFEEDAAAAASVAKKNKTGPAEGARRPGKRLEEKPSVPAIVKPKRELEI
DSTENVILGKKPKLEDVLSEDVNLTDLMPQVKVQSVETVEGCTHEVALPANEEFTGLKPR
TGKAAKEYPFILDAFQREAILCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFT
SPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAW
VIFDEIHYMRDTERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIY
TDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGDQKGRKGGT
KGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAI
DCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMG
INMPARTVLFTSASKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIG
KQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRTIPEIVERVNNL
EAQYNKIVIPNEENVVIYYRIRQQLAKLGKDIEEYIHKPKYCLPFLQPGRLVKVKNEGDD
YGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLHCTKDSLKNSATESAKPARPDERGEMQV
VPVLVHLVSAISSVRLYIPKDLRPIDNRQSVLKSVQEVQKRFPDGVPLLDPIDDMGIKDQ
GLKKVIQKIEAFEHRMYSHPLHNDPNLETIYKLCEKKAQIAMDIKVAKRELKKARTVLQM
DELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATAL
LSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLETDEENYLNSFKPNLMD
VVYTWANGANFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGIT
KIKRDIVFAASLYL |
|---|
| NT seq |
3105 nt +upstreamnt +downstreamnt
atggcggaggcctttggggatgagctcttcagcgtgtttgaagaggacgcggccgccgct
gcttctgtcgccaagaagaacaaaacgggccccgccgagggtgccagaaggccaggaaaa
cgattggaagaaaaaccttcagtaccagcaatagtcaagccaaaaagggaacttgagatt
gatagtactgaaaatgtcattttggggaaaaaaccaaaattggaagatgttttatcagaa
gatgttaatctgacagatctgatgcctcaagtaaaggtgcagtctgtcgaaactgttgaa
ggttgtacacatgaggttgcgcttccagcaaatgaagaattcacaggtctgaagccaaga
actggaaaagctgcaaaagaatatccatttattcttgatgccttccagagagaagctatt
ctttgtgtagataataaccagtctgtgttagtgtcagctcacacatcagcgggcaaaact
gtttgtgctgagtatgcaattgccctggctttgagggaaaagcagcgtgtgatatttaca
agtccaattaaagctttaagtaatcagaagtaccgtgagatgtatgaagagtttcaggat
gttggtttgatgactggggatgtcaccattaatcctacagcttcttgtttggtaatgaca
actgagatcttgagaagtatgctttacagaggttctgaagttatgcgtgaagttgcttgg
gttatatttgatgaaattcactacatgagagatacagagcgtggtgtggtttgggaagag
actattattttgcttcctgataacgtacattacgtgttcctttctgcaactattccaaat
gctcgtcaatttgctgaatggatctgccatcttcacaaacagccttgccacgtgatttac
actgactatcgacccactccactgcagcattatatatttccagcaggaggagatggactc
catctggttgttgatgaaaatggagatttcagagaagataattttaatacagcaatgcaa
gtgcttagagatgcaggagatttagcaaaaggggatcagaaaggcaggaaaggaggaaca
aaaggtccttcaaatgtttttaagattgtgaagatgatcatggaaaggaatttccaacct
gtgattattttcagcttcagtaagaaagactgtgaagcctatgcacttcagatgacaaaa
ttagatttcaatacagatgaagaaaaaaaaatggttgaagaagtcttcaataatgcaatt
gactgtctctcagatgaagacaaaaagcttcctcaggttgaacacgtgcttccccttctg
aagcgaggaattggtattcatcatggtggtttgcttcctatcttaaaagaaaccatagaa
atacttttctcagagggactaataaaggccttatttgcaacagagactttcgctatggga
attaatatgccagccagaactgtgctgtttacaagtgccagtaaatttgatgggaaagat
ttccgatggatatcctcaggtgaatacattcaaatgtcaggccgcgcgggacgccgaggt
atggatgacagaggaatagtaattcttatggtggatgaaaaaatgagtccaacaattggc
aagcagcttttgaagggttcagctgatcccttaaatagtgcattccacctgacatacaac
atggtattgaacttacttcgagtagaagaaattaatcctgaatacatgttagaaaaatca
ttttatcaattccagcattacagaactattccagaaatagtggaaagagtcaacaatttg
gaagcacagtacaacaaaatcgtaattcccaatgaagaaaatgtggtgatatactacaga
atccgccagcagcttgcaaaactgggtaaagatattgaagagtatattcacaaaccaaag
tactgcttgccctttctacagccaggaagactggtaaaggtgaagaatgaaggtgatgac
tatggatggggagtggttgttaatttctctaagaaatcaaatgttaagccaaattctggt
gaactggacccattgtatgtagttgaagtgctcctgcactgcaccaaagacagtttgaaa
aattctgctacagagtctgcaaagccagccagacctgatgagagaggagagatgcaggtt
gttcctgttttggtgcatcttgtctcagctatcagcagtgtccgcctctacataccgaaa
gacctgaggccgattgataacaggcaaagtgtgttaaaatctgtacaagaagtacagaaa
cgatttcctgatggagtacccttactagaccctattgatgacatgggcatcaaagaccaa
gggttgaaaaaagtaatccaaaaaatagaggcatttgagcataggatgtattcacatcct
cttcacaatgatccaaatttggaaaccatatacaaactttgtgaaaaaaaagcacagatt
gctatggatattaaagtagcaaagcgagaattgaagaaagccagaactgtcctgcaaatg
gatgaactcaaatgccgcaagcgtgttttgagaagactgggctttgccacgtcttcagat
gttattgagatgaaaggacgggttgcttgtgaaatcagcagtgctgatgaactactcctg
acagaaatgatgttcaatggcctcttcaatgacttgtctgcagagcaggcaactgcacta
ctcagctgttttgtgtttcaagagaattccagtgaaatgccaaagttgactgagcagttg
gcaggaccacttcggcaaatgcaggagtgtgcaaaaagaatcgccaaggtgtcagcggaa
gcaaaactggaaactgatgaagaaaattacttgaattctttcaaacccaacctaatggat
gttgtgtatacatgggcaaatggagctaactttgcacacatctgcaaaatgactgatgtc
tttgaaggtagcataattcggtgcatgaggcgtctagaggaactgcttcggcagatgtgc
caggctgcaaaagccattgggaacacagaactggaaaataagtttgcagaggggattaca
aaaatcaagagagatattgtgtttgctgcaagcctttatctgtaa |
|---|
