Pseudopodoces humilis (Tibetan ground-tit): 102107474
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Entry
102107474 CDS
T02921
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03013
Nucleocytoplasmic transport
phi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102107474 (PNN)
03015 mRNA surveillance pathway
102107474 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102107474 (PNN)
03041 Spliceosome [BR:
phi03041
]
102107474 (PNN)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102107474 (PNN)
Spliceosome [BR:
phi03041
]
Complex C
Other components
EJC/TREX
102107474 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
102107474
NCBI-ProteinID:
XP_005520334
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLALTGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGASSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVAIATERQKRRQEIEQKLE
VQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTK
PHLFYIPGRMCPATQKLMDESQKKMNALFESRRNEFAEQINKMEARPRRQSVKEKEHQEV
QNEEKKEEQNKEQEEGKVAQQVEEMETGNQHNDVEMEEVGEEKGKIGSGSGHSDAEKEQE
EDEQKHDIEMKVEEPTEVRENDKQQDDQHEEVTVVKEESGNVQPADNEQDVAEMNEADSV
EPVENENGKEIEPETECDAQPEKVCSVTSPKKEKGIKTENKAELEETQDKTPEAQTESVS
EALSQPQSVPLAQSPQLSQSTQDTEPQTDKDENAVVSVKVVEAQAEQNQTLSVEGKTKTR
SRSRGRAGNKTGHNRSSSSSSSSTSSSTTSASSSSTGSSTSRSSSTSSSTTSGSTSRDSS
SSSSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSS
RSDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgcgcgctgcaggagcagctggagaaagccaaggaaagcctcaag
cacgtagacgaaaatatccgcaagctcacgggccgggaccccaatgatgtgaggccccct
caaaacaggctgttagccctcacaggccccggtggaggtagagggcgtgggagcttattg
ctaaggcgtggattctcggatagtggaggaggacccccagccaaacagagggatcttgaa
ggtgcatccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgatgatattaaaaagccagcgttgccatcttctgttgttgctacctcc
aaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgttgatgggcactcttcaaaaatttaaacaggagtcc
acagttgctattgctactgagaggcaaaagagacgacaagaaattgaacaaaaacttgaa
gtgcaggcagaggaagagagaaagcaagttgaaaatgagaggcgagaactatttgaagaa
agacgtgctaaacagacagagctgcggttattggagcaaaaggttgagcttgctcagttg
caagaagaatggaatgaacataacgctaaaataattaaatacataagaacaaagacaaaa
cctcatttattctacatacctggcagaatgtgtcctgcgacgcagaagctgatggacgag
tcacagaaaaagatgaatgcactctttgaaagcaggagaaatgaatttgcagagcagatt
aacaaaatggaggccaggcccagaagacaatctgtgaaggaaaaagagcatcaggaggtg
cagaatgaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcag
caggtggaagagatggagacaggtaatcagcacaatgatgtagaaatggaggaggtaggg
gaggaaaagggaaaaataggttcaggttcagggcacagcgatgcagaaaaagaacaggaa
gaggatgagcagaagcatgacattgagatgaaagtagaagagcctactgaggtgagggag
aatgacaagcagcaggatgatcagcatgaggaggtcacagttgtaaaagaggaaagtgga
aatgttcagccagcagataatgagcaggatgtggctgaaatgaatgaggcagatagtgta
gaacctgtagaaaatgaaaatggcaaagaaatagaaccagaaacagagtgtgatgctcag
ccagaaaaagtgtgtagtgttacttctcccaagaaggagaaaggtatcaaaacagaaaat
aaagctgaacttgaagaaacacaggacaaaacacctgaagctcagacagaatctgtgtct
gaggctctgtctcagccacagtctgtgccactagcacaatcacctcagttgtctcagtcc
actcaggatacagagccccagacagacaaggatgaaaatgctgtggtgtctgtaaaggtg
gttgaagcccaggcagagcagaatcagacactgagtgtagaaggtaagactaagactagg
agtagaagcaggggtagggcagggaacaaaactggtcataaccgtagcagcagcagcagt
agcagtagcacttcaagcagtactaccagtgcaagtagttccagtactggcagcagtacc
agtcgcagcagttccaccagcagcagcactacaagtgggagtacaagcagggacagtagc
agcagtagctctagcagtagtgaaagtagaagtcgaagccgaggcagagggcataacaga
gatagaaaacgcagaaggagcacagacaggaagcggagggatgcttcaggagtagacaga
agtcacaagtcctcaaaaggtggtagtagagataccaaaagctcaaaggataaaagttcg
aggtctgacagaaagagatctatatcagaaagtagtcggtcaggcaagagaacttcacgg
agtgaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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