Pseudopodoces humilis (Tibetan ground-tit): 102107563
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Entry
102107563 CDS
T02921
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03020
RNA polymerase
phi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102107563 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
102107563 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102107563 (POLR2B)
03400 DNA repair and recombination proteins [BR:
phi03400
]
102107563 (POLR2B)
Enzymes [BR:
phi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102107563 (POLR2B)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102107563 (POLR2B)
DNA repair and recombination proteins [BR:
phi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102107563 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
102107563
NCBI-ProteinID:
XP_005530355
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcagtatgacgaagacgatgacgaaatcacccccgac
ctgtggcaagaagcctgctggattgttattagctcgtattttgatgaaaagggtttagtc
aggcaacagttggattcctttgatgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttacaagctgaagcccagcatgcctcaggagaagtggaagag
ccaccccggtatctgttgaagtttgaacaaatctatctctccaaacctacgcattgggaa
agagatggagcaccctcacctatgatgccaaatgaagccagactgagaaaccttacgtat
tctgcccccttgtatgtggatataaccaaaacagttattaaagaaggggaggaccagttg
cagacccagcatcagaaaacctttataggaaaaattcctatcatgttgcgttccacatac
tgtttgctgaatggcttaactgaccgtgatctttgtgagctgaacgagtgtccacttgat
cctggtggctacttcatcattaatggatcagaaaaagttctgattgcccaggagaaaatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcgaaatatgcctacacaggagag
tgtagatcttgtctggaaaattcctctcgaccaacaagtactatatgggtcagcatgctg
gccaggggtggacagggtgcaaagaagagtgccattggtcagcgcattgtagcaactctg
ccttatatcaaacaagaggtccccatcatcattgtcttccgtgcacttggctttgtgtct
gacagggacattctagagcacatcatatatgattttgaagacccagaaatgatggaaatg
gtcaaaccttctctggatgaagcctttgtcattcaggagcaaaatgttgccctaaacttc
attggctcaagaggtgccaagccaggtgtcaccaaagaaaagagaatcaagtatgccaaa
gaagtcttgcagaaggaaatgctcccacacgttggtgtcagtgacttctgtgaaaccaaa
aaggcctattttctagggtatatggttcatagactgttgctggcagcactgggaagaaga
gagctggatgacagagatcattatggcaacaaaagactggatcttgctgggccactctta
gctttcctgttccgaggaatgttcaagaatttgctgaaggaagtgagaatatatgcacaa
aagttcattgacagagggaaagatttcaacttggagttggcaattaaaacaagaattatt
tcagatggtttgaaatattcattggcaactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtatctcaggtgttgaaccgcctgacttttgcatccactctttcc
cacctgaggcgcctgaattctccgattgggagagacggaaaactggccaagccgcggcag
ctgcacaacaccctgtggggaatggtttgccctgctgagacccctgagggtcatgcagta
ggacttgtgaagaacttagccctgatggcttacatttctgtggggtctcagccatcccca
attctggaattcttggaagagtggagtatggaaaacctagaagaaatatctccagcagca
atagctgatgctaccaagatatttgtcaatggctgctgggtaggaatacacaaagatcca
gagcagctgatgaataccctaaggaagcttcgtcgtcagatggacatcattgtgtcagag
gtctcaatgattagagatattcgcgagcgagaaatccgcatctacactgatgcaggcaga
atttgtcggccccttttaattgtagagaaacagaagttgctgctgaagaaaaggcacatt
gaccaactgaaggaacgagagtataacaattacagttggcaggatcttgtggccagtggt
gtagtagagtacattgacaccctggaagaagagactgtgatgctggcaatgactccagat
gacttgcaagagaaaggtgtggcatactgttcgacatacacacactgtgagattcaccca
tccatgatcctgggagtgtgtgcatctattatccctttccctgatcacaaccagtctccc
aggaacacataccagtctgctatgggtaagcaggctatgggagtctacatcaccaacttc
catgtccgtatggatacgctggcacacgtgttgtattatccccagaagcccctggtaaca
acgcgctccatggagtacttgaggttcagagagttaccagcaggtatcaactcgattgta
gccattgcatcatacacaggctataaccaggaagactctgtcattatgaaccgttctgct
gttgacagaggctttttcaggtctgtgttctatcgctcatacaaagagcaggagtctaag
aaagggtatgaccaagaggaagtttttgaaaagcctacacgtgaaacttgccaaggtatg
agacacgcaatctatgacaaacttgacgatgatggtttgatagcccctggggtacgtgtg
tctggggatgatgtcatcattggcaaaacagtcacactgccagaaaatgaagatgagctg
gaaagcaccaacagacgcttcaccaagagagactgcagcaccttcctgcggaccagtgag
actgggattgtagatcaggtcatggtaaccctgaaccaggaaggatacaaattctgcaag
atcagggtacgttctgtaagaattccacaaattggagataaattcgctagcagacacggt
cagaaaggaacctgtggtatccagtacaggcaagaggatatgcccttcacgtgtgaaggc
atcacacctgatatcattatcaacccccacgctatcccttcccgcatgaccattggtcac
ttgattgagtgtcttcagggcaaggtgtctgcaaacaagggagaaattggtgatgctaca
ccttttaacgatgctgtcaatgtgcaaaagatttcgaaccttctgtcagattatggctat
catctaagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacctcccag
atcttcattggtcctacctattaccagcgcttgaagcacatggtggatgacaaaatccat
tcccgtgcacgagggccaatccagatccttaacagacagcccatggaaggcagatctcgt
gatggtggccttcgctttggagaaatggaacgagattgccagattgctcatggagcagcc
cagttcttgagagaaagattgtttgaagcttcagacccataccaggtccatgtgtgtaac
ctctgtggaatcatggcaattgcaaacacgaggactcacacctacgaatgccgcggatgc
cgtaataaaactcagatatctttggttcgaatgccctatgcctgcaaactcctcttccaa
gaactgatgtctatgagtattgcgcctcgtatgatgagtgtttag
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integrated database retrieval system
