Pseudopodoces humilis (Tibetan ground-tit): 102107576
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Entry
102107576 CDS
T02921
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04136
Autophagy - other
phi04140
Autophagy - animal
phi04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
102107576
04140 Autophagy - animal
102107576
04136 Autophagy - other
102107576
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phi01002
]
102107576
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102107576
03029 Mitochondrial biogenesis [BR:
phi03029
]
102107576
Peptidases and inhibitors [BR:
phi01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
102107576
Membrane trafficking [BR:
phi04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102107576
Mitochondrial biogenesis [BR:
phi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102107576
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
102107576
NCBI-ProteinID:
XP_014118485
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
GPAPGPAPAPGTSPGSERGGQRVRGRVLAAWNCVKYGWTLRPRPHFHPRDPLYLLGRVYT
PGNGEDLARFRRDFCSRLWLTYRSGFPALPGSPRTTDCGWGCTLRSAQMLLGQGLLLHLL
GRDWVWPEALLEPKAGRSRGSREPPGWTRDLRDGPRDPRDGPRDPRDGPRDPRDGPRDPR
DGQRDPLGCSRDPPGWTRPPQNGEGPPRMDTESPGGERGPPGKLRDPSGRARDPPGELRD
PSGKLRDPSGGAGDPSGQLRDPPGHLRDPLGELRDPSGWARNPPGKLRDSPGKLRDSLGK
LRDPREQPRDPSGRERDPPGKLRDPPEQPRDPSGRERDPLGQLRDPPGKLRDPPVKLRDP
SGQPRDPPGHLRDPPEKLRDPSGRSRPLPDAPRAPREAEQRHRAIVSWFSDHPRAPFGIH
RLVELGREFGKSAGDWFGPAIAAHLLRGAVESCTETPGLAVYVAQDCTVYKGDVARLVRA
PEPERHRGLVLLVPARLGGESLNPVYVECVKELLQLRSCLGIIGGKPRHSLYFLGFQGDS
LLYLDPHLCQPCVDTTRENFPLQSFHCRFPRKIPFGKIDPSCTFGFYAAAAELEQLWGEL
GRVLSSRAPERYPIFTLAEGLAQDQTLEPPPQPGPPPEAPRPKKPSSDEFVFL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
ggaccggcaccgggaccggcaccggcaccgggaaccagccccgggagcgagcgcggcggg
cagcgcgtgagggggcgcgtcctcgcggcctggaactgcgtcaaatacggctggacgctg
cggccgcggccccacttccacccgcgggaccccctgtacctgctggggagggtctacaca
ccggggaacggggaggacctggcgcggttccggcgggatttctgctcccgtttgtggctc
acctaccgcagcggattcccggcgcttcccggttccccccgcaccaccgactgcggctgg
ggctgcaccctgcgcagcgcccagatgctgctgggccaggggctgctgctgcacctgctg
ggccgggactgggtgtggccggaggcgctgctggaaccgaaagccgggaggtcccgaggg
agccgcgagcccccgggatggacacgggacctccgggatggtccgagggacccccgggat
gggccgagggacccccgggatggaccgagggacccccgggatgggccgagggacccccgg
gatggacagagggaccccctgggatgtagccgggaccccccaggatggacgcgacccccc
cagaatggagagggaccccccaggatggacacggagtcccccgggggggaacggggtcca
ccggggaagctccgggacccctcgggacgggcacgggatcccccgggggagctccgggac
ccctcggggaagcttcgggacccgtcgggaggggcaggggacccctcgggacagctccgg
gaccctccgggacacctccgggaccccctgggagagctccgggacccctcgggatgggca
cggaaccccccggggaagctccgggactccccggggaagctccgggactccctggggaag
ctccgggacccccgagaacagccccgggacccctcgggacgggaacgggaccccccgggg
aagctccgggaccccccagaacagccccgggacccctcgggacgggaacgggaccccttg
ggacagctccgggatcccccggggaagctccgggatcccccggtaaaactccgggacccc
tcgggacagccccgggaccctccgggacacctccgggatcccccggagaagctccgggac
ccctcgggacggtcacgacccctcccggacgccccccgagccccccgggaggcggagcag
cggcaccgagccatcgtgtcctggttctccgaccacccccgcgcccccttcgggatccac
cggctcgtggagctgggccgggagttcgggaaaagcgccggggactggttcggtcccgcc
atcgccgcccacctcctccggggggctgtggagtcctgcaccgagacccccgggctcgcc
gtctacgtggcccaggattgcaccgtttacaaaggggacgtggccaggctggtgagggca
ccggaaccggagcggcaccgcgggctcgtcctgctggtgccggcgcggttggggggcgag
agcctgaacccggtgtacgtggagtgtgtcaaggagctgctgcagctccgctcctgcctc
ggcatcatcgggggaaagccccggcactcgctttatttcctcggcttccaaggcgactcc
ctgctctacctggacccccacctctgccagccctgcgtggacacaacccgggagaacttc
cctctccagtcgttccactgccgcttcccgcggaaaattcccttcgggaagatcgacccc
agctgcaccttcggcttctacgcggccgcggccgagctggagcagctctggggggagctg
ggccgggtgctgagctcccgggctccggagcgttatcccattttcaccctggccgagggt
ctcgctcaggaccaaaccctggagccccctccccagcccggacccccccccgaagccccc
cgccccaaaaaacccagctcggacgagttcgtcttcctctga
DBGET
integrated database retrieval system
