Pseudopodoces humilis (Tibetan ground-tit): 102107615
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Entry
102107615 CDS
T02921
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102107615 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102107615 (TRIP12)
Enzymes [BR:
phi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102107615 (TRIP12)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
HECT type E3
102107615 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
102107615
NCBI-ProteinID:
XP_014111615
LinkDB
All DBs
Position
Unknown
AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQQEDPERVNTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSPETNKPHTKSKRRHSDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSCIKSGSSVESTGTEEKSAKVSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEPSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEPPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKV
CTNGSGTLGTTTTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVEHYFSSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRL
KRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQY
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVLNPLEIYLISTPPENITFEDPSLDVILLLRVLHAISRYWY
YLYDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCS
VEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFE
SVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSF
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttttaataccacaacaagaagatccagagagagtcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacatactgaa
acttccccagaaactaacaagccacatactaaatctaagagaagacactcagaccaagag
cagcccaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtataaagagt
gggtcatcagttgaatcaactggcactgaagaaaagtcagcaaaagtctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcaccgattcttcttcttca
gcttccacctcctcctcctcttctgctgttgcctctgcttcttctactgttcctcagggt
gccagagtgaaacagggaaaggaccagagtaaggctagacgttcccgttctgcatccagc
cccagtccaagaaggagtagcagggacaaagaaccaagtaaaacaggtggctcttcaaaa
tttgactgggctgctcgattcagcccaaaagtcagtctccctaaaacaaaactgtctcta
ccaggctcctccaagtcagagacatcaaaacctggaccttcaggactacaggctaagcta
gcaagtctaagaaaatctacaaagaagcgcagtgaatcaccacctgctgagctccccagt
ttacggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcct
gacaacaaccaggatggagttaactcttcagctgcacggacagatgagcctccccaggga
gctgcagcttccagttctgttgctggggctgtaggtatgacaacttctggagaaagtgag
tcagatgattctgagatgggaagactacaagctctattagaggctaggggtcttcctcct
cacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagt
ggagctagttctaaagctcaacagcttttacaaggtctccaagccactgatgaaagtcag
caattgcaggcagtgattgagatgtgccagctgttggttatgggaaatgaagaaacatta
ggaggatttccagtcaagagtgttgtaccagctttgataactctgctgcagatggagcac
aactttgacattatgaatcatgcatgtcgggccttaacatacatgatggaagcacttccc
agatcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagttatc
cagtgcattgatgtggcagagcaggcgcttacagccctggagatgttgtcacgcaggcac
agtaaagccattttgcaggcaggtgggttggcagactgtttgctgtatctggaattcttc
agtataaatgcacaaaggaatgcactagctattgctgccaactgctgccagagtataacg
cctgatgagtttcactttgtggcagactctttgccactgctaacacaaaggttaacccat
caggacaaaaagtctgttgaaagcacttgtctgtgttttgcacggctagtggacaacttc
cagcatgaagagaacttgctgcagcaggttgcttccaaggacttgttaacaaatatccag
cagcttttggtcgtgacacctcctatcctgagctcaggaatgttcatcatggtggtgcgc
atgttctccctgatgtgctccaactgccccacacttgcagtccagcttatgaagcaaaat
attgcagaaacacttcacttcctcctttgtggagcctcaaatgggagttgtcaagaacaa
attgaccttgttccaagaagtcctcaagaactttatgaacttacttctcttatctgtgaa
ctgatgccttgcctgccaaaagagggaatctttgctgttgatactatgctaaagaaagga
aatgcacaaaacacagatggtgcaatatggcaatggcgagatgacaggggtctctggcat
ccctataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggatgag
ataagtctgtctacacttgggcgtgtctatactattgattttaactctatgcagcaaata
aatgaggatactggaacagctcgtgccattcagcgaaaaccaaaccctttagccaataca
aatactagtggacattcggaattgaagaaggatgatgctcgagcacagttaatgaaagag
gacccagaactggcaaaatcctttatcaaaacactgtttggtgttctttatgaagtatat
agttcttcagctggacctgctgttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaggatgtgctgaaaaaccatgctgtttcaagtcat
attgcctccatgctgtcgagtcaagaccttaagatagtagttggagccctgcagatggca
gagattttaatgcaaaagttacctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaagaacttggcagagtctgaggctttgctgacaagccccccaaaagta
tgcactaatggatcaggaacgctgggaaccactacgaccataagtactgggacagccact
gctgccagcaatgcagctgcagatttgggctctcccagtttacagcacagccgggaggat
tccttggatctgagcccacagggacgactgagtgatgttctaaagagaaaaagactgcca
aaacgagggccaaggagaccaaaatactcccctccaagagatgatgacaaagtagacaat
caagctaaaagccctacaactactcagtctcctaaatcttctttcttggcaagtttaaat
cctaaaacatggggaagattaagcacacagtccaacagtaataatattgaaccagcacga
acagcaggagtaagtggtcttgcaagggctgcttccaaggataccatttccaataacaga
gaaaaaattaagggctggattaaggagcaagcccataaatttgtagaacattactttagt
tctgaaaacatggacggaagcaatcctgcactaaatgtattacagagactttgcactgca
actgaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagc
attgtctcggaatctgacgtctcctcatttgaaatccagcatagtgggtttgttaaacaa
ctgctgctctatttgacatctaaaagtgaaaaagatgctgttagcagggatatcagattg
aaaagatttcttcatgtatttttttcttctccgcttcctggagaagagccccttggaaga
ttagagccattagaaaatgcacctttgttggcattagtccataaaatgaacaactgcctc
agtcagatggaacagtttcctgttaaagtgcatgacttccctagtggaaatggaacaggg
agcagtttttctcttaacagaggatcccaagctttaaaattcttcaatacacatcaatta
aaatgccaactgcaaagacatccagactgtgctaatgtgaaacagtggaaaggtggacct
gtgaagattgatcctctggctttggtacaagccattgaaagataccttgtagttagaggt
tatggaagagttagagaagatgatgaagatagtgatgatgatgggtcagatgaagaaata
gatgaatctttggctgctcagttcttaaattcagggaatgtgagacatagattgcagttc
tacattggagatcacttgctgccatacaatatgactgtgtatcaagcagtcaggcagtac
agtttacaggctgaggaagagagggagtctacagatgatgaaagcaacccactgggaaga
gctgggatttggacaaaaacgcacaccatttggtacaagcctgtgcgggaggatgaagat
ggtaataaggactgtgttgggggtaaaagaggaagagcacaaactgctcccacaaaaacc
tcccctagaaattctaaaaaacatgatgagttgtggcatgatggtgtatgcccttcggtg
ttaaatcctctggaaatttacctcatatctactccacctgaaaatataacatttgaagac
ccctcattagatgttattcttcttttgagagttttacatgccatcagtcgatactggtat
tacttgtatgataatgcagtctgcaaggagataattccaacctcggagttcatcaacagt
aaactgacagcaaaagcaaacaggcagcttcaggatcctttggtaattatgacaggaaac
atcccaacttggctgacagaacttggaaaaacatgcccatttttctttccatttgatacc
cgtcaaatgctgttttatgtaacggcctttgaccgtgatcgagccatgcaaaggctactg
gatactaatccagaaatcaatcagtcggattctcaggatagcagagtggcaccacggctg
gacaggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatg
caggatctcggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcaca
ggcctaggccctacactagagttctatgcacttgtatctcaggaactacagagagcagac
ttaggcctttggaggggagaagaagtgactttagccaatccaaaaggaagccaggaaggt
acaaagtacattcataaccttcaaggcctttttgcacttccttttggtagaacagccaag
ccagctcacattgcaaaagttaaaatgaagttccgctttctgggaaaactaatggccaag
gcaatcatggacttcagactggttgaccttcctcttggacttcctttttataagtggatg
ctacgacaagaaacttccttgacatcgcatgacttgttcagtattgatccagttgtagcc
aaatcaatatatcaccttgaagacattgtaagacaaaagaaaagacttgaacaggataaa
actcagaccaaagaaagtctacagtatgcattggaggctctgactatgaatggctgctca
gtggaagatctagggctggacttcacacttcctgggtttcccaatatagagctgaaaaaa
gggggaaaagatacaccggtcactatccacaatttagaggagtatctcagattggttata
ttctgggcactaaatgaaggtgttgccagacagtttgactccttcagagatggatttgag
tcagtgtttccccttagtcatcttcagtacttctatcctgaggagttggaacagctcttg
tgtgggagcaagacagacacttgggatgcaaagactttaatggaatgttgcaggcctgat
cacggttatacacatgacagtcgagcagtgaagtatctcttcgaaattctcagtagtttt
gatagtgagcagcaaagactgtttcttcagtttgtgacaggcagccccagactgcctgta
ggaggttttcgaagtttgaatcctcccttgacgattgtacggaagacatttgagtccaca
gagaatcccgatgatttcttaccctcagtaatgacttgtgtgaactatctcaaattgccg
gactattcaactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
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integrated database retrieval system
