Pseudopodoces humilis (Tibetan ground-tit): 102107871
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Entry
102107871 CDS
T02921
Symbol
PAN3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102107871 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102107871 (PAN3)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102107871 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
102107871 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
102107871
NCBI-ProteinID:
XP_014105030
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MDGGGLADANLTDSYFSTSFIGVNGFGSPAETKYPMMQRMTNSSSSPSLLNDSAKQYAGH
DPLTSPNSSLFNDFAALSVSQRRKLAKPAFPSFISDLEDRYNTVLPRKYRLGMLDERIVP
VGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTENNLQTPNPSASEFIPKGGSTSRLSN
VSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP
NPANYMVPTSASASVANAVSQPPSTGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIY
HPAAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADIPAVPAEVDSYHSLFP
LEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQ
HSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSADSYFTKRKWGQHDGPL
PRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILVTGKTRLRVNCVGIFDV
LTFDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSGIQRENLQKAMELVTINYSSDL
KNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLA
KLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKDIKG
IEAKSKRKHVDIQVGIEMPS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggatggtggtgggttagctgacgctaatctaacggattcatactttagcaccagcttc
attggcgttaatggatttggaagtcctgctgaaacgaagtatcccatgatgcagaggatg
acaaatagcagcagctcccctagccttctcaatgacagtgccaagcagtatgcaggccat
gatccactaacttcaccaaattcatccttgtttaatgactttgctgccctcagcgtttct
caaaggaggaagctggcaaaaccagcatttccttcgtttatctctgacttggaggacaga
tataatacagtcttgcccaggaagtatcgactggggatgctggatgagaggatagttccg
gtgggatcaaaagcaagaaaatcaaagaaccctatcggctgtctggctgacaggtgtaaa
acaggagtacccatcaatatggtttggtggaacagagtcacagaaaacaatttacagaca
ccaaatccttctgcaagtgagtttattcctaaaggaggatcaacctccaggctgagtaat
gtatcccagtcaagtatgtctgccttctctcaagccttgttctctcacccctccatggga
agtcctgctactgctgggttagcaccaggaatgtcactgtcagcaggatcttctcctctt
cattctcccaaaataactcctcatacatctcctgctcctcgaagaagaagtcatactcct
aacccagcaaactatatggtgcctactagtgcctctgcgtctgtcgctaacgctgtgtct
cagcctccatctactggccaggtgatccagaaggaaacagtgggtggaacaacatacttc
tacactgatacaactccagcacctctcacaggaatggtttttccaaactaccacatctac
catccagctgcacctcatgttgcttacatgcagccaaaagcaaatgcaccttccttcttc
atggcagatgagctcagacaggaactcatcaacagacacttaataactatggcccagatt
gatcaggctgatattcctgcagttcctgctgaagtggacagctaccacagtctctttcct
ttggaaccactgccaccgcccaatcggatacagaaaacgagcaactttgggtacattaca
tcatgctataaagctgtaaatagtaaagacgacctgccatattgccttcggaggatacat
ggttttcgtctagttaacacaaagtgcatggtattggttgacatgtggaaaaagattcag
cactcaaatattgtaactttgcgtgaagtgtttaccactaaagcttttggagagcattct
ctagtgtttgcatatgatttccatgctggaggagagaccatgatgagcagacacttcaat
gaccctagtgctgattcctatttcacaaaacggaaatggggtcagcatgatggacctctg
ccacggcagcatgcagggttgcttccagagtctttgatatgggcatatattgtgcagctc
agctctgccttacggaccattcacacagcaggactggcctgcagagttatggatccaaca
aagattctggtaacaggcaaaacaaggttacgagtcaattgtgttggaatctttgatgtt
ttgacatttgacaacagtcaaaataatccactggcattaatggctcagtttcagcaagca
gatctgatctccctggggaaagttgtgttggctttggcttgcaattctttatcaggaatt
cagagagagaatttgcagaaagcaatggaactggtgacaatcaactattcctctgatctg
aagaatctgattttgtatttgctgaccgaccaaaacaggcttcgcagtgtaaacgatatc
atgcctatgattggtgcacgattctatactcagttggatgctgctcagatgcgaaatgat
gtgatagaagaagacctagcaaaggaggtgcaaaatggaaggctgtttaggcttctagca
aaattgggaacaatcaatgagaggccagagtttcagaaggacccaacatggtcagaaact
ggagacaggtatttactaaagctctttcgagatcaccttttccatcaggtgacagaagcg
ggtactccttggattgacctcagtcacattatctcatgtcttaacaaggacattaaaggg
attgaggctaaatcaaaaagaaagcatgttgacattcaagtaggcattgaaatgccatca
tga
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