Pseudopodoces humilis (Tibetan ground-tit): 102107948
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Entry
102107948 CDS
T02921
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phi03036
]
102107948 (HFM1)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102107948 (HFM1)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Meiosis-specific proteins
Others
102107948 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ResIII
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
102107948
NCBI-ProteinID:
XP_014106062
LinkDB
All DBs
Position
Unknown
AA seq
1433 aa
AA seq
DB search
MFNSADMVFSLDSLFYEKPDMRQRCLENEEHKAWFIAPAPAIAEIPAVEELQKELEKNSD
STHMGERKHEFIQQCKSNTKEVEDKSSAPVHFGIAPQKEVLQLSLGERDKISFQHENLKV
VSSFLSFDENKSKRVIDFSQQPENKALSENSDDESVHSTLRKSLFRKSGNVHKNTAFKAG
SFDVKEIGTYLNTSENMKEVTEEGFLRKNHHAPITEDSDFTLHRVNNAAIVSENGIKIQS
FSNASEILDMTGTTGRKLEILRAVTEIPTQFRSIFKEFPYFNYAQSKALDDLLYTDRNFV
ICAPTGSGKTVMFELAITRLLMEAPLPWLNIKVVYMAPIKALCSQRFDDWKEKFGPIGLT
CKELTGDTLMDDLFEIHHADIIITTPEKWDSMTRRWRDNSIVQLVRLFLIDEVHVIKDES
RGATLEVVVSRMKTIQSSLWRFLEKHDTVPPLRFVAVSATIPNTQDIAEWLSDSKMPAVC
LKIDEDQRPVKLRKIVLGFPCSDNQTEFKFDLTLNYKIASIIQTYSEQKPALVFCATRKG
VQQAASVLAKDAKFLLSVEQKQRLQGFANSLKDSKLRDLLTYGVAYHHAGMELSDRKIIE
GAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYVGGVFQEYSETDILQMIGRAGRPQ
FDTTATAVIMTRCSTRERYIQMLNGADIIESSLHRHLVEHLNAEIVLHTVTDVSVALEWI
RSTFLYIRALKNPTHYGFSSGLDKVGIEAKLQELCLKNLNDLSSFDLIRMDEANNFKPTE
TGRLMAWYYIALDTVKQFFTIKGTETLKELITMISNCTEFVDVKLRTSEKKILNTLNKDK
DKITIRFPMEGKIKTREMKVNCLIQAQLGCIPIQDFTLTQDTGRIFRNGLRVTRWLSDFL
ASSKNNFAALLNSLILAKCFRCRLWENSLHVSKQLEKIGVSLSNAMVNAGLTSFKKIEDI
NARELELILNRHPPFGNQIKESVLHLPKYELEIEQLPKYSDTLAEILVTVKLTNYEHLQT
KRTAPDFHYVTLVIGDADNQVIFNQKIMDSVLLKTGNWMKKIEVKRALKSEDISINLISS
DYVGLDIQQAYTAFYLTPKTEGCKVVTNQKLKAESTLDICYGSRQSLPAAKVDTGGRSKQ
EIAFRKYGNRECNHRCKNKDVCGHDCCKTGVPPRSQMNGDTQFSLYLADLRSRNSISSIP
PVKRLKMQMLNQAENVDLKQFVFTPKSLLPALPRSGNKLPSSSPSVDQTDNINTLEVSKK
QLQSWNCGKNNALNVDFELRDDIWDDIDDEKLVLASNFVSRELDECEPLCQYTTSKATNN
ISKDSCTVQDETNIQKSDACVVNSTSKVNLPVQNRNRTLFSFQGKKHSSLSQEQKNVQCS
SNPEIISDTSKFTRKEDFFIFTKQQEKEADPRYLLDDESNDVKPFLGIFDGIL
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactctgcagacatggtcttttcactggatagtttattttatgaaaaaccagat
atgagacaaaggtgtctggaaaatgaagagcataaggcttggtttattgcacctgctcca
gctattgctgaaattccagctgtggaggagttacagaaggaactggaaaaaaactcagac
agcactcatatgggagagagaaagcatgagtttatacaacagtgtaagagtaacacaaag
gaagtagaagataaatcatcagcacctgttcattttggcatagcccctcaaaaagaagtc
ctacaattaagtctaggagaaagagataaaattagttttcagcatgaaaatctgaaagtg
gtttcatctttcctctctttcgatgaaaataaatctaaaagagtaatagatttttctcag
caaccagaaaataaagcattaagtgaaaacagtgatgatgagagtgtccattcaacatta
agaaaaagcttatttagaaagtctggcaatgtgcataaaaatacagcatttaaagccggt
tcttttgatgtgaaagaaattggtacttacttaaatacaagtgaaaacatgaaagaagtg
acagaagaaggttttttgagaaaaaatcatcatgctccaataactgaagactcagatttt
actttgcatagggtaaataatgcggcaattgtgtctgaaaatggaattaaaattcaatca
ttttctaatgcttcagagattctggatatgacaggaactacaggaagaaaactggaaatt
ttgagggctgttacagaaataccaacccaatttaggagtatttttaaggagttcccatat
tttaactatgcacaatcaaaagctttggatgatcttttatatacagacaggaactttgtg
atttgtgctccgactggctctggaaagactgtaatgttcgagctagctattaccagatta
ctcatggaagccccactgccttggttaaatattaaagttgtttacatggctccaatcaaa
gctctgtgcagtcagcgttttgatgattggaaagaaaaatttggtcctataggactcacc
tgcaaggaactgacaggagatacactgatggatgatttatttgaaatacatcatgctgac
attattatcactacacctgaaaagtgggatagcatgactagaaggtggagagacaactct
atagtccagcttgtacgactgtttctcattgatgaggtacatgttataaaggatgaaagc
cgcggcgcaactttggaagttgtagtcagtcggatgaaaactattcagtcttctctttgg
cgtttcttagagaagcatgacactgttcctcccttgagatttgtagctgtttctgcaaca
atcccaaatactcaagatattgcagaatggctttcagatagtaagatgcctgctgtatgc
ctgaaaatagatgaggatcaacggccagtgaagctacgcaaaattgttcttggttttcct
tgcagtgacaatcagacagaattcaaatttgacttaactcttaactacaagatagctagc
attatacaaacatactcagagcaaaaaccagcacttgtgttttgtgccacaagaaaagga
gtacaacaggctgcttctgttcttgcaaaagatgctaaatttctactgagtgtagaacag
aaacaaagattacaggggtttgcaaattcattgaaagactccaaactgagagaccttttg
acgtatggtgtggcttatcatcatgcgggtatggagctatcggacagaaaaataattgaa
ggagcttttactgtaggagacttgccagtactttttactactagcaccttagctatggga
gtcaatctacctgcacacctggtggttataaaatccacaatgcattatgttggaggagta
tttcaagagtacagtgagactgatattctgcaaatgattgggagagctggaaggcctcag
tttgacactacagctacagcagttattatgactcgttgcagtaccagggagagatatata
cagatgttaaatggtgctgatataatagagagcagcttgcacaggcaccttgttgaacac
ttaaatgcagaaatagtgctgcatactgtcactgatgtcagtgtagctttggaatggata
cgatcaacattcttgtacattagagccttaaaaaatccaacgcattatggtttttcatct
ggattagataaagttggaattgaagcaaaattacaagaactgtgtctgaagaacttaaat
gatttatcatcttttgatttgatcaggatggatgaagcaaataatttcaaaccaacagag
acaggaagattaatggcgtggtattacattgcacttgatacagtgaagcagtttttcaca
attaagggaactgagactctaaaagaattgattacaatgatctccaactgcacagaattt
gtggatgtgaagttaagaacaagtgaaaagaaaatactgaataccttgaataaagacaaa
gacaaaataactatcaggtttccaatggaggggaagataaaaacaagagaaatgaaagta
aactgtctcattcaggctcagctgggatgtattcctattcaagactttactttgacacaa
gatactggcagaatatttagaaatggcttgagagttactagatggttatctgactttctg
gcatcatctaagaacaactttgctgctttattaaactctttgattttagccaagtgtttc
aggtgcagactttgggaaaattcacttcatgtgtctaaacaattggaaaaaattggtgta
tcactgtcaaatgctatggtaaatgctgggctgacatcgtttaaaaaaattgaagatata
aatgcaagggagcttgaattgattttaaacagacatcctccttttggaaaccagattaaa
gagtctgttttgcaccttccaaaatatgaacttgaaattgaacagctgcccaaatacagt
gacacattggccgaaattttagtaaccgtcaagttaacaaactatgagcatctacagaca
aagagaacagcgccagactttcactatgttacgttggtcataggagatgctgacaaccaa
gtcatttttaatcagaaaattatggattctgtgctgctgaaaactggaaattggatgaag
aaaattgaagttaaaagagctcttaaatcagaagacattagtataaatttaattagttct
gattatgttggccttgatatacagcaagcatatacagccttctacttaacaccaaaaaca
gagggatgtaaggtggttacaaatcaaaaattgaaagctgaatctacacttgatatatgt
tatggctcacgccaaagcctgccagcagcaaaagtagatacaggaggcagatctaaacag
gagattgctttcaggaaatatggaaacagagaatgcaaccaccgctgtaaaaataaagat
gtgtgtgggcatgactgctgtaaaactggagtacctccgaggtcacagatgaatggagac
acacagttttccttgtacctagctgatttaaggagcaggaactcaatttcatctataccc
ccagtaaaacggctaaagatgcagatgttaaatcaagctgaaaatgtggatctcaaacaa
tttgtttttacaccgaagtctttattgccagccttgccaaggtctggcaataaactgcca
tcttcatcaccttcagtggaccagacagataatattaataccttagaagtatctaagaaa
cagctgcaatcctggaattgtggaaagaataatgctttgaatgtggactttgaactgaga
gatgatatttgggatgatattgatgatgagaaattggtacttgctagtaattttgtcagt
agagaattagatgaatgtgaacccctctgccagtatacaacaagcaaagccacaaataac
atttcaaaagattcatgcacagtacaagatgagaccaatattcagaaatcagatgcctgt
gtggtcaatagcacatcaaaagtgaatttacctgtacagaatagaaatagaactttgttc
agttttcaagggaaaaagcattcaagtctttctcaagagcaaaaaaatgtacagtgttct
tccaacccagaaataatctcagacacttctaaattcactaggaaagaagatttttttatt
ttcacaaaacagcaagaaaaagaagcagatcctagatatcttcttgatgatgaatccaat
gatgtcaagccctttcttggaatatttgatggtattttgtaa
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integrated database retrieval system
