Pseudopodoces humilis (Tibetan ground-tit): 102108196
Help
Entry
102108196 CDS
T02921
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04140
Autophagy - animal
phi04148
Efferocytosis
phi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102108196 (VPS16)
04148 Efferocytosis
102108196 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102108196 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phi04131
]
102108196 (VPS16)
Membrane trafficking [BR:
phi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102108196 (VPS16)
Hops complex
102108196 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
PAS
Motif
Other DBs
NCBI-GeneID:
102108196
NCBI-ProteinID:
XP_005518015
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MDCYTANWNPLGEETFYRKLELYSMEWGLREDLRDCVVAAAPYGGPIALLRNSRRDKTPG
ARPLLEIYTSSGLLLASVPWKSGRLVQLGWTAGEDLLCIQEDGTVLVYSLLGEFRRHFSM
GNEVLQNHVLEAQVFHTEFGTGVAILTGALRFSLATNIEDLKLRRLPEVPGLQKPPSCWS
VLSQDRVTVVLLALGQELFLLDSTSCSVLAPPGLSPSAGPFLHMAVSFTHRHLALFSDSG
TVWMGPASLKEKFSDFNTGIRSPPKQMVWCTRPRSRHRAVVLAWERQLMVVGNSSESIRY
KQLTIEVLLDRLVLRRLYPLAIRICDFLRLPAMQGVSRILAHWACYKVQQKDKSDEEVAQ
AINLKLGDAAGISYSDIATRAHDCGRAELAIKLLEYEPRSGEQVPLLLKMKRSKLALGKA
IESGDTDLVYTVVLHLKNELNRGTFFMTLQNQPVALSLYRQFCRHQERETLKDLYNQDDN
HQELGNFHVHSAYCERRIEGRVAALQNALDEFYKAKNDFAAKATEEQIKLLRLQRHLQEE
LDKPYLELSLHDTVSTLILDGHHKRAEQLCRDFRIPDKRYWWLKINALATRGDWEEVEKF
SKSKKSPIGYLPFVEVAVKHHNRYEARKYAPRVPPEQRVKAFVLVGDLEQAAEAAIERRN
EAEMSLVLARCSAATDGAVAEKLNRARAQLLKK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggattgttacacggccaactggaacccgctgggcgaggagaccttctaccggaagctg
gagctctactccatggaatgggggctgcgggaggacctgcgtgactgcgtggtggcagct
gccccctatgggggtcccatagctctgctgaggaattcccggcgggacaagacccctggc
gcccgcccgctcctggagatctacacgtcctcggggctgctcctggccagtgtcccgtgg
aagagcgggcggctggtgcagctgggctggacggcaggagaggacctgctgtgcatccag
gaggacgggacggtgctggtgtacagcctgctgggcgagttccgacggcacttcagcatg
ggaaacgaggtgctccagaaccacgtgctggaggctcaggtgttccacacggagttcggg
acgggcgtggccatcctgaccggggccctgcgcttctccctggccaccaacatcgaggac
ctcaaactgcgccgcctgcccgaggtccctgggctgcagaagcccccgtcctgctggtcc
gtgctgtcccaggacagggtgaccgtggtgctgctggccctgggacaggagctcttcctg
ctggacagcacctcctgctccgtgctggctccccccgggctgagcccctcggcggggccg
ttcctgcacatggccgtgtccttcacccaccggcacctcgcgctcttctccgactccggc
accgtctggatgggaccagcctcgctcaaggagaaattctctgacttcaacaccggcatc
cgctcccctcccaagcagatggtttggtgcacacggccccggagccggcaccgtgccgtg
gtgctggcctgggagcggcagctgatggtggtgggaaattcctcggagagcatccgatac
aagcagctcaccatcgaggtgctgctggacaggctggtcctgcgccgcctgtacccgctg
gccatccgcatctgtgacttcctgcggctcccggccatgcagggcgtcagccgcatcctg
gcacactgggcctgctacaaggtgcagcagaaggacaagtcggacgaggaggtggcccag
gccatcaacctcaagctgggggacgcggccgggatctcctactcggacatcgccacacgc
gcccacgactgcggccgcgcagagctggccatcaagctgctggagtacgagccccgctcc
ggggagcaggtgccgctgctgctgaaaatgaaacgcagcaaactggccctgggcaaagcc
atcgagagcggggacaccgacctggtttacaccgtggtgctgcacctcaagaacgagctc
aaccgcggcactttcttcatgaccctgcagaaccagcccgtggccctcagcctgtaccgc
cagttctgccggcaccaggagcgggagacgctgaaggatttgtacaaccaggacgacaac
caccaggagctgggcaacttccacgtgcactccgcctactgcgagaggcggatcgagggc
cgcgtggccgctctgcagaacgccctggacgagttctacaaggccaagaacgacttcgct
gccaaggccaccgaggagcagatcaagctgctgcggctgcagcggcacctgcaggaggag
ctggacaagccgtacctggagctgtccctgcacgacaccgtgtccaccctcatcctggac
gggcaccacaagcgcgccgagcagctctgccgcgacttcaggatcccggacaagaggtac
tggtggctgaagatcaacgccctggccacacgcggggactgggaggaggtggagaagttc
tccaagagcaagaagtcgcccatcgggtacctgcccttcgtggaggtggcggtgaagcac
cacaaccgctacgaggccaggaaatacgcgccccgcgtgccccccgagcagcgcgtcaag
gccttcgtcctcgtgggggacctggagcaggcggccgaggcggccatcgagcgcaggaac
gaggccgagatgagcctggtgctggcgcggtgctcggccgcaaccgacggcgccgtggcc
gagaaactcaaccgggcacgggcacagctcctcaaaaagtga
DBGET
integrated database retrieval system
