Pseudopodoces humilis (Tibetan ground-tit): 102108238
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Entry
102108238 CDS
T02921
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03013
Nucleocytoplasmic transport
phi03015
mRNA surveillance pathway
phi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102108238 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
102108238 (NCBP1)
03015 mRNA surveillance pathway
102108238 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102108238 (NCBP1)
03041 Spliceosome [BR:
phi03041
]
102108238 (NCBP1)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
102108238 (NCBP1)
Spliceosome [BR:
phi03041
]
Common components
Common spliceosomal components
Cap binding complex
102108238 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
102108238
NCBI-ProteinID:
XP_005530017
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSRRRHSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSLPWVG
KELYEKKDAEMDRLLSQTESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQKLKK
DRWQERHILRPYLAFDSVLCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDGEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKELEE
TKARLARQHKRRDSDDDDDDDDRSTDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgatgacagcgatgggcagccccacaagaggcggaggacg
tccgagccatcggagatagaggagaggctggagtcgctcatctgcagggtgggagagaag
agtaattcatctttggagagcaacttggagggcctagctggtgttttagaagctgatctt
ccaaattacaaaagcaagatactgagaatactctgtactgtcgcacgtctgctaccagaa
aagcttactgtttacacgacattggtggggctactgaatgccaggaactacaattttggc
ggggaatttgtagaagccatgattcgtcagctcaaggaatgtttgaaagtcaacatgtat
aatgaagctgtgcatttagtacgttttctgtccgatctcgtgaattgtcatgtaatagca
gcaccatcaatggtagctatgtttgagaactttgtgagtgtgacacaggaggaggatgta
ccccaagtgcgatgtgactggtatatgtttgcatttctgtcatctttgccttgggttgga
aaggagttatatgagaaaaaggatgctgaaatggatcgtctcttgtctcagacagaaagt
tatctgaaacgccgccagaagattcatgtgccaatgctgcaagtgtggactgctgacaaa
ccacatccacaagaagagtatttagactgcctttggtctcagattcagaaattgaaaaaa
gaccgttggcaagagcggcacatcctgaggccctacttggcttttgacagcgttctctgt
gaggcactgcaacacaatctgcctcccttcacacccccacctcacactgaggattctgta
tacccgatgccaagggttatttttaggatgtttgactacacagatgatcccgagggtcct
gtcatgcctggcagccactccgttgagagatttgtaatagaggagaacctccactgcatc
atcaaatcccactggaaagagagaaagacttgtgctgcacagctgttgagctatccagga
aataacaagatccctttgaactaccatatagttgaggtaatatttgcagagttgtttcag
ctgccatctccaccacatattgaagttatgtacacaacactcctcattgagctgtgcaaa
cttcagcctggctctttaccacaagttcttgcacaagccacagaaatgctctacatgcgt
ttggacacaatgaatacaacatgtgtggacagatttattaactggttttctcaccacttg
agcaactttcaattccgttggagctgggaagactggtcagattgtcttactcaggacctt
gaaaaacccaaacccaaatttgtgagagaggttttggaaaagtgcatgcgactctcctac
catcagcgaataatagacattgttcctgcaagtttttctgtcctcagtcctgctaatcca
gtgtgcatttacaaatacggagacgagagcaataggtctcttcctggctatactgtggca
ctctgtttaacaattgcaattaaaaataaggccagcaatgatgaaatcttcagcatttta
aaggatgtgcctaatccaaaccaggatgatgatgatggtgaaggatttactttcaaccct
ctgaaaatagaagtctttgttcagaccctgctccatctagctgcaaagtcttttagccat
tccttcagcgccctggcaaagtttcatgaagtcttcaaaacacttgctgaaagtgatgag
gggaaacttcatgttctgagggttgtgtatgaggtttggaagaatcatccacagatgatt
gctgtgcttgtggacaagatgattcggacacaaattgttgactgtgctgcagtagcaaac
tggatcttttcttcagagctggcacatgattttactaggttttatatctgggagatctta
cattccacaatccgtaagatgaataagcatgtcctgaagattcacaaagagctggaggag
actaaagcgagattggccaggcagcacaaaagacgagacagtgatgatgacgatgatgat
gacgaccggagtactgatcgggaagatggaccactggaagagcagatagagcgcttgcag
gaaaaagtagagtcagcccagagtgagcagaagaatctctttcttgttatattccagcgt
ttcattatgttgttaacggagcacttagtgcgctgcgagactggtggaattgatgtattt
acaccttggtacaagagctgtatagagaggttgcagcagatcttcctgcagcaccaccag
ataatccagcagtacatggtgacactagagaacctcctgtttacagctgaactggaccac
cacattctggctgtgtttcagcagttctgtgctctgcaggcctga
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