Pseudopodoces humilis (Tibetan ground-tit): 102108627
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Entry
102108627 CDS
T02921
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04010
MAPK signaling pathway
phi04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102108627 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102108627 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102108627 (NFKB2)
Transcription factors [BR:
phi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
102108627 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
102108627
NCBI-ProteinID:
XP_005520601
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MLGLDGLLRPASSSPAGGRPRADMDEQFQPCLDGIDYDDFSFGSHMMEQKEPLMETVEGP
YLVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYTGMARIEVDLVTH
SDPPRVHAHSLVGKQCNEAGNCVTIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQQK
MRNRNHLLTEVELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDPIH
DSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSP
TDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQFTYYPVVEDKEEVERK
RKKVLPQFPQHFGGGSHMGGAGGGAGGFGSGGGGNLSFPYSPGLTYNSIYSSGPHPVGSY
QGGVQMKGPEAEGPGSDRQAPAEESTYCKELQKHAQLCQLWMLALARRNAHALLDYSVTA
DPRMLLAVQRHLAASQDENGDTPLHLAIIHEQTAVIKQLIDIIVSIPSQQIINISNNLQQ
TPLHLAVITKQPQVVQLLLQARADPTLLDRYGNSLLHLALQAGDEEMLRTLLAHLGSATP
YLLRLPNFHGLLPVHLAVKAKSLACLDLLVRTGADVNAVERQSGRTPLHLAVEMENLNMA
THLVKKLGADINSRTFAGNTPLHLAAGLGSPTLTKLLLKAGADVLCENDEPMSLSSSEAS
SDTDTDPEEQELAMDLGEPALPAEHSTTSKLSTQGQWQAGQRQRRCHTSLDLTRSQKVRE
ILLQASQQGPEAKLPTAPQPGKVLSLDSEALQGLEQLLNQDCSGSDWIELAKRLGLCSLV
ETYKDTPSPSASLLRSYELAGGSLGGLLEALDSMGLHNAVRMLHKTEALEKLQTTELKED
SAYGSESVEEGQAPTLALKPGGELPPSQQPQVH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgctggggctggacgggttgctgagaccagcctcttcctccccggccggcggccggccc
cgcgccgacatggacgagcagttccaaccctgcctggatgggattgattatgatgacttc
agttttggctcccacatgatggagcagaaggagcccctgatggagacagtggaaggtccc
taccttgtcattattgagcagccaaagcagcggggtttccgatttcggtacggctgcgag
ggcccttcccatggggggctgccgggagcatccagtgagaaggggcgcaagacctatccc
actgtcaagatctgtaactacacagggatggcccggatcgaggtagacctggtgacacac
agtgaccctccccgtgtgcacgcccacagcctggtgggcaagcagtgcaacgaggctggc
aactgtgtcacaatcgtgggaccaaaggacatgaccgctcagttcagcaacctgggtgtg
ctccatgtcaccaagaagaatatgatggagatcatgaaggaaaagctgaagcagcagaag
atgcgcaacaggaaccatctgctgacagaagtggagctgcgtgagatcgagctggaggcg
aaggagctgaagaaggtgatggacctgagcattgtgcggttgcgcttcactgcctacctc
cgtgacagcagtgggaacttcacgctggccctccaacctgtcatctcagatcccatccat
gacagcaagtcccctggagcttccaacctgaagatctcacggatggataagacagcaggc
tccgtgcggggaggagacgaagtctacttactgtgtgacaaagttcagaaagatgacatt
gaggtgcgtttctatgaggatgatgagaatggctggcaggccttcggagacttttctcct
acagatgtgcacaagcagtatgccattgtcttccgcacacccccctaccacaagcccaag
atcgaccgtcctgtcaccgtcttcctgcagctgaagcggaagcggggaggggatgtgagt
gactccaagcagttcacctactacccagtggtggaagataaggaagaagtggaaaggaaa
cgcaagaaagtcctgcctcagtttcctcagcactttggtggtggctcacacatggggggg
gccggtgggggggccgggggctttggctctggaggaggtgggaacctcagcttcccatac
tcccctgggctgacctacaacagcatctactcatctggcccccacccagtggggagctac
caggggggtgtgcagatgaagggccccgaggcagaggggcctgggagcgacaggcaggca
cctgcagaagagagcacatactgcaaggagctgcagaagcacgcccagctgtgccagctg
tggatgctggcgctagcccgtcgcaatgcccatgccctgctcgactactcggtcaccgct
gacccccgcatgctgctggcagtccagaggcacctagccgcgtcacaggacgagaacgga
gacacgcctttgcacctcgctattatccatgaacagacagcggtgatcaagcagctgatt
gacatcattgttagcatccccagccagcagatcatcaacatctccaataatctgcaacag
acgccactgcatctggcagtcatcaccaagcagccccaagtggtccagctcctgctgcaa
gcccgcgctgacccaaccttgctggaccgctatggcaattccctgctgcacctggcactc
caggctggcgatgaagagatgctgaggacactgctggctcacctgggctcagctactcct
tatctgctccgcctgcccaatttccatggcctcctgcctgtgcatttggctgtgaaggca
aagagtttggcttgcctggacctgctggtcaggacaggagcagatgtgaatgcagtggag
aggcaaagtgggaggaccccactgcacctggctgtggagatggagaacctgaacatggcc
acccacctggtgaagaagctgggagcagacatcaacagccggacttttgctgggaacacc
cccctgcacttggctgctggcctgggctcccccaccctcaccaaactcctccttaaagct
ggggcagatgttttgtgtgagaacgacgagcccatgagcctatcctcgtcagaggccagt
agtgacacagacactgaccctgaggagcaggagctggccatggatctgggggagccagcc
ctgcctgcagagcacagcaccacctccaagctctccacgcagggacagtggcaggcaggg
cagaggcagcgccgctgccacacatccctggacctgactcggagccagaaggtgcgggag
atcctgctgcaggcttcccagcaggggcccgaggcaaaactgcctactgccccccagcca
gggaaggtcctgtcactggacagtgaggcactgcaggggctggagcagctgctgaaccag
gactgcagtgggtcagactggatcgagctggccaagcgcctggggctgtgcagcctcgtg
gagacctacaaggacacgccctcgcccagtgccagcctcctgcgcagttacgagctggca
ggtggcagcctggggggactgctggaggcactggactctatggggctccacaatgccgtg
aggatgctccacaaaaccgaggcactggagaagctgcaaaccacagagctgaaggaagac
agtgcctacggcagtgagtcggtggaggaggggcaggcgcctacattagccctgaagcca
gggggtgagctgccccccagccagcagccacaggtgcactga
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