Pseudopodoces humilis (Tibetan ground-tit): 102109061
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Entry
102109061 CDS
T02921
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phi03009
]
102109061 (DDX54)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102109061 (DDX54)
Ribosome biogenesis [BR:
phi03009
]
Eukaryotic type
Pre-60S particles
Helicases
102109061 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
102109061
NCBI-ProteinID:
XP_005524656
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MAPRARRQPRAAPVPVTPLPAFPTLTEEDDGAEAELDTQAMVRAQNQKKKKSGGFQSMGL
SYPVFKGIMKKGYKVPTPIQRKTIPAILRGRDVVAMARTGSGKTACFLIPMFERLKAPSQ
AGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATP
GRLVHVAVEMKLKLHTVEYVVFDEADRLFEMGFAEQLQEIIARLPDGHQTVLFSATLPKL
LVEFARAGLTEPMLIRLDVESKLSEQLKLVFFHVRGDNKPAVLLHLLRSVVKPQDQTVVF
VATKHHTEYLRELLTAQGIHCTHIYSSLDQTARKINIAKFSQGKCPVLLVTDVAARGLDI
PMLDNVINFSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEMPYVFDLHLFLGRPLVLA
GAQEMPADAGGVLGRVPQSLVDDEECLLLTDHEGSLELRSLRRIADNAHKQYLRSRPGPS
PESIKRAKDLDVSQLGMHPLFRARFEDTELQRLKLVDSIKTYKSKATIFEINATSRTPAS
SVMRSKRRHDRALIEKFQRGQQEKRAAALKGQGLCPAPPEPQDGEGEQEHLQDVFSNVGG
QKRKQSNGGEEGPRKKPQQPAQQDEDFYIPYRPKDFESERGLSVGGEGSAFEQQAAGAVL
DLMGDENHNLNKSKQLLKWDRKKKRFVGQTGQEDKKKVRTESGRYISSSYKNNLYEKWKQ
KYKVDERDEDEEGPRSREQFRGKHKRGHGPTQPPAQGRVRSELRNKQQILKQRKKAAKQR
FLQSGGLKRLKARNRQRVQELRQMAFGRRAGAAKKGKLRKRM
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcgcgcccgccgccagccccgggccgcgccggtccctgtgaccccactgcct
gccttccctaccctcaccgaggaggacgatggcgctgaagctgagctggacactcaggcc
atggtgcgggcccagaaccagaagaagaagaaatccgggggcttccagtccatgggcctc
agctaccctgtattcaagggcatcatgaagaagggctacaaggtgcccacgcccatccag
aggaagaccatccctgccatcctgcgtggccgggatgtggtggcgatggcacggacgggc
agtgggaagacagcctgcttcctcatccccatgttcgagcggctgaaggcacccagccag
gccggggcacgcgccctcatcctctcacccacccgggagctggccctgcagaccctcaag
ttcaccaaggagctgggcaagttcaccggtttgaagacagccctgatcctgggaggagac
aagatggaggaccagtttgctgccctgcatgagaaccccgacataatcatagccacccct
gggcgcctggtgcacgtggcagtggagatgaagctgaagctgcacaccgtggagtacgtg
gtgttcgacgaggccgacaggctctttgagatgggctttgctgagcagctccaggagatc
attgcccggctcccagatggccaccagaccgtgctgttctctgccacgctgcccaagctg
cttgtcgagtttgcccgggctggcctcactgagccgatgctgatccgcctggatgtggag
tccaagctgagtgagcaactcaagctggtgttcttccacgtgcgtggggacaacaaaccg
gctgtgctgctccacctgctgcgcagcgtggtgaagccccaggaccagacagttgtcttt
gtggccaccaagcaccacacagagtatctgagggagctgctgacagcacagggcatccac
tgcacccacatctacagctctctggaccagactgcccgcaagatcaacattgccaagttc
tcccagggcaagtgcccagtgctgctggtcaccgacgtggctgcgcgggggctggacatc
cccatgctggacaatgtcatcaacttcagcttccccgccaagggcaagctgttcctgcat
cgtgtcggccgtgtggcccgagctggccggagtggcactgcctactcgctggtggctcct
gacgagatgccctacgtgttcgacctccacctcttcctggggcgcccgctcgtcctcgct
ggagcacaggagatgcctgctgatgctggcggggtcctgggccgtgtcccccagagcctg
gtggatgatgaggaatgcctgctgctgacggaccacgagggctccctggagctgcgcagc
ctccgccgcatcgcggacaacgcccacaagcagtacctgcgctcccggcccggcccctca
ccagagtccatcaagagggccaaggacctggatgtgtcccagctgggcatgcaccccctc
ttcagagctcgcttcgaagacaccgagctgcagaggctgaagttggtggatagcattaaa
acctacaagtccaaggcaaccatctttgagatcaatgccacatcccggacaccggccagc
tctgtgatgcgatcgaagcggcgccacgaccgtgccctgatcgagaagttccagcgtggg
cagcaggagaagcgggcagcagcacttaaagggcaggggctgtgcccggcccctcctgag
ccccaggatggggaaggagagcaggagcacctccaggatgtgttctccaatgtggggggc
cagaagcgaaaacagagcaatggaggagaagagggtcctaggaagaagccacagcagcca
gcacagcaggatgaggacttctacatcccataccggcccaaggactttgagagtgagcgg
gggctgagcgtgggcggcgagggcagcgccttcgagcagcaggcggccggggccgtgctg
gatctcatgggcgacgagaaccacaacctcaacaagagcaagcagctgctcaagtgggac
cgcaagaagaagcggtttgtggggcagacgggccaggaggacaagaagaaagtgcggacg
gagagcgggcgctacatcagcagctcctacaagaacaacctctacgagaagtggaagcag
aagtacaaggttgacgagcgggacgaggatgaggaagggccacgcagcagggagcagttc
agagggaagcacaagcgtgggcacgggcccacgcagcccccggcgcagggaagggtgcgc
tcggagctgaggaacaagcagcagatcctgaagcagcgcaagaaggcggccaagcagcgc
ttcctgcagagcgggggcctgaagcgcctcaaggcacggaaccgacagcgggtgcaggag
ctgcggcaaatggccttcgggcgccgggcgggcgctgccaaaaagggcaagctgaggaag
aggatgtaa
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integrated database retrieval system
