Pseudopodoces humilis (Tibetan ground-tit): 102109214
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Entry
102109214 CDS
T02921
Name
(RefSeq) uncharacterized protein LOC102109214
KO
K16494
protocadherin beta
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phi04515
]
102109214
Cell adhesion molecules [BR:
phi04515
]
Cadherins
Protocadherins
102109214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Gly_rich_2
Motif
Other DBs
NCBI-GeneID:
102109214
NCBI-ProteinID:
XP_014118332
LinkDB
All DBs
Position
Unknown
AA seq
1760 aa
AA seq
DB search
MAIARQVLCLSAFLWLPPARAEPIRYSVAEEAESGSLVGELAEDAGLTPAQLSARRARLV
SEDGRQHFALERGSGRLLVAGRLDREELCGQSATCMLPFELLLSNPLQFFRVEVALEDIN
DHSPIFPEEEVSFDIPETSEPGSHFPLEVARDLDIGSNTVQTYSISPENKYFSVSYGIQF
AGKKYLELVLEKPLDREEQAEMGFRVIAVDAGSPPRTGTTEVEIVILDVNDNAPVFTQAV
YIGKVLENMPEGSVVLIVLATDQDAGVNGEISYQLRQDVGQNDSLFLIDPITGEIKITKP
LDFEAAQSHELSVRARDGGGLSAICKVLVEVVDVNDNAPEVVVSSFSSPLPENTAPGTVV
ALFTVRDRDSGANGKISCGLEDQLFFSLRPAYKNYYELVTVSALDREETARYILRVTAAD
AGSPPLTSTQTFTVDISDVNDNAPVFNQTSYTMYVRENNVPTVFVGAVSAADADVGLNGK
VSYSLAAVQAAEGPWCSCVSVNSENGHVFVLRPLDYERLRQTEVTVSASDAGSPPLRANV
SVRLVVLDENDNAPLVLYPGQDSSPASSELVPVSAEAGYLITKVVAVDADSGQNSWLSYH
LLRASEPGLFTVGVHSGEVRLRRPVTERDSVRQKLLVLVRDNGKPPLSATAAVSALLLKD
LSDVRLPGHGSPAPEDQAGSLTTYLIIALVCVSLLFLVSTALFVARKVCKRKELKAGHVL
YGADNLQSGLADGAAAGSLPRAYCYEISLTTGSGNSEFKFLKPILPSVPAQHCAVGHGPE
DEQHFPCVPVSTDDTAPDNPGTLSAGHFNSLSFTAARAAGGGGRSCSAHRWVVPSAKAAP
SGCGSGGGRARPGPAQRSSAQRSAAEPERAEISAAQPAGGGSGCVGERCPVSAAAGTPRL
CQAPLSAESEAAREGARPALGRFRRGITGDSRHTDPGRRRRRRRRAMAIARQVLCLSAFL
WLPPARAEPIRYSVAEEAESGSLVGELAEDAGLTPAQLSARRARLVSEDGRQHFALERGS
GRLLVAGRLDREELCGQSATCMLPFELLLSNPLQFFRVEVALEDINDHSPVFPENRVTFD
IPETSNPDSRFPLEAARDLDIGSNTVQTYSISPENEFFSISSGTRITGKKFLELVLEKPL
DREEQADMSFSLIAVDGGSPPRTGTTEVKIIILDANDNAPIFAQEEYIGEVLENMPEGSV
VLTVLATDQDAGVYGEITYQLSEAADESDSIFVIDPLSGEIKLTKPLDYEAAQTHELSVR
ARDGGGLSAICKVLVEVVDLNDNAPEVVVSSFSSPLPENTAPGTVVALFTVRDRDSGANG
KISCGLEDQLFFSLRPAYKNYYELVTVSALDREETARYILRVTAADAGSPPLTSTQTFTV
DISDVNDNAPVFNQTSYTMYVRENNVPTVFVGAVSAADADVGLNGKVSYSLAAVQAAEGP
WCSCVSVNSENGHVFVLRPLDYERLRQTEVTVSASDAGSPPLRANVSVRLVVLDENDNAP
LVLYPGQDSSPASSELVPVSAEAGYLITKVVAVDADSGQNSWLSYHLLRASEPGLFTVGV
HSGEVRLRRPVTERDSVRQKLLVLVRDNGKPPLSATAAVSALLLKDLSDVRLPGHGSPAP
EDQAGSLTTYLIIALVCVSLLFLVSTALFVARKVCKRKELKAGHVLYGADNLQSGLADGA
AAGSLPRAYCYEISLTTGSGNSEFKFLKPILPSVPAQHCAVGHGPEDEQHFPCVPVSTED
TAPDNPGTLSAGHFNSLSFN
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctgtctgctttcctgtggctgccgcccgctcgc
gccgagcccatccgctactccgtagccgaggaggcggaaagcggctccctggtaggcgag
ctggcggaggacgcggggctgacgccggcgcagctctcggctcgccgcgcccgcctggtg
tcggaggacggccggcagcattttgccttagagcgcggctccggccgcctgctcgtggcg
gggaggctggaccgggaggagctgtgcggccagtccgccacctgcatgctccccttcgag
ctgctgctctccaaccccctgcagttctttcgggtcgaggtggctctggaggatatcaat
gaccattcgcctattttccctgaggaagaggtgtcttttgacatacctgagacgagcgag
ccaggctctcatttcccgttggaggtggctcgggatctcgatattggcagcaacacagtc
cagacatacagcatttctcctgagaacaagtattttagtgtatcttacgggattcagttc
gcaggcaagaagtatctggaactggtcttagaaaagcctctagacagagaagagcaggca
gagatgggtttccgtgtcattgcagtagatgcgggctctcctcccagaactgggacgact
gaagtggaaattgtcatactagatgtaaatgacaatgctcccgtcttcacacaggcggtg
tacattgggaaagttttggagaatatgccagaaggctctgtggttctgattgtactagca
acggatcaggatgcaggagtaaatggggaaatttcctatcaactgaggcaagacgtggga
cagaacgactcactatttctgattgatcccataactggtgaaattaaaatcacaaaacct
ctggactttgaggcagcacagagtcacgaactgagtgtgagagccagagatggtggggga
ctctcagcaatctgcaaagtgctggtggaggtggtggatgtgaatgacaatgccccagag
gtggtggtcagctccttcagcagtcccctccccgagaacacagcgcccggcacggtggtt
gccctgtttacggtcagggaccgggattctggggccaacgggaagatctcgtgtggcctc
gaggatcagctcttcttctcgctgcggccagcctataagaattactatgagctggtgaca
gtgagcgcgctggaccgcgaggagacggctcgctacatcctcagggtgacggcagcagac
gcggggtcgcctcctctgacgagcacgcagaccttcaccgtggacatctcggatgtcaat
gacaacgcccccgtcttcaaccagacgtcgtacaccatgtacgtgcgtgagaacaatgtg
cccacggtgtttgttggagccgtcagcgctgccgacgctgacgtggggctcaatggcaag
gtgagctattccctggcagcggtgcaagcggcagaggggccttggtgctcgtgcgtgtct
gtgaactctgagaacgggcacgtgtttgtgctgcggcccctggactacgagcgcttgagg
cagacggaggtgacggtcagtgcctctgacgcgggctctcctcccctcagagccaacgtc
agcgtccgcctcgtggtgctggacgagaacgacaacgccccgctcgtgctgtacccaggc
caggacagcagcccagcgtccagtgagctggtgcccgtgtcggccgaggcgggctacctc
atcaccaaagtggtggccgtggatgccgactccgggcagaactcgtggctctcgtaccac
ctgctgagggccagcgagccagggctgttcacggtgggtgtccacagcggggaggtgcgt
ctgaggaggccggtgacggagagagacagcgtgaggcagaagctccttgtcctggtcaga
gacaacggcaagccgcccctgtcggccacggcagctgtgagcgcgctcctgctcaaggac
ttgtcagacgtgcgcctccccgggcacggcagcccggccccagaggatcaggctggctcc
ctgaccacctatttaatcattgccctggtgtgtgtctccctgctcttcctcgtctccacg
gcactctttgtggctcgcaaggtgtgcaagagaaaggagctgaaggctggccatgtgctt
tatggtgccgacaacttgcagagcggcctggccgatggggccgctgcagggagcctgccc
cgcgcttattgctacgagatcagcctcacaacgggctcgggcaacagcgagttcaaattc
ctcaagcccatcctccccagcgtgccagcacagcactgcgccgtgggccacggcccggag
gatgaacagcatttcccctgtgtccctgtcagcaccgacgacacagcaccagacaatcct
ggcactctctctgcaggacacttcaattctctttccttcacggcagcgcgggctgcgggc
ggcggcgggcgcagttgcagcgcgcaccgctgggtggtgccctcggccaaggcggcgccg
agcggctgcggcagcggaggcggccgagcccggcccggcccagcccagcgcagctcggct
cagcgcagcgcagctgagcccgagcgagctgagatcagcgcagcgcagccggccggaggt
ggcagcggctgcgttggcgagcgctgccccgtgtcagccgctgccggcaccccccggctg
tgtcaggcgccgctttcggcggaatcggaggcagcgagagaaggagcccggcccgcgctt
ggccgctttcggcggggaatcaccggggacagccgccacaccgaccccggccgccgccgc
cgccgccgccgccgcgccatggcgatcgcaaggcaagtgctttgtctgtctgctttcctg
tggctgccgcccgctcgcgccgagcccatccgctactccgtagccgaggaggcggaaagc
ggctccctggtaggcgagctggcggaggacgcggggctgacgccggcgcagctctcggct
cgccgcgcccgcctggtgtcggaggacggccggcagcattttgccttagagcgcggctcc
ggccgcctgctcgtggcggggaggctggaccgggaggagctgtgcggccagtccgccacc
tgcatgctccccttcgagctgctgctctccaaccccctgcagttctttcgggtcgaggtg
gctctggaggatatcaatgatcattcacccgttttccccgagaatcgagtgacttttgac
atccccgaaacgagcaaccctgattcacgattcccactggaggctgctcgggatctcgat
attggcagcaacacagtccagacatacagcatctctcccgagaacgagttctttagtatc
tcatcgggtactcgaatcacgggaaagaagtttcttgagcttgttttggagaagccacta
gacagagaggagcaggcagacatgagttttagcctcattgctgtagatggtgggtctcct
cccaggactgggacaaccgaagtgaaaattatcattctagatgcaaatgacaatgctccc
atcttcgcacaggaagagtacattggtgaggttctggaaaacatgccagaaggctcagta
gttttaacagtgctggcaactgatcaggatgcaggtgtctatggggaaattacctatcaa
ctcagtgaagctgcagacgagagcgactcaatatttgtgattgaccctctaagtggagaa
attaaactcacaaaacctctggactatgaggcagcacaaactcacgaactgagtgtgaga
gccagagatggcgggggactctcagccatctgcaaagtgctggtggaagtggtggatttg
aatgacaatgccccagaggtggtggtcagctccttcagcagtcccctccccgagaacaca
gcgcccggcacggtggttgccctgtttacggtcagggaccgggattctggggccaacggg
aagatctcgtgtggcctcgaggatcagctcttcttctcgctgcggccagcctataagaat
tactatgagctggtgacagtgagcgcgctggaccgcgaggagacggctcgctacatcctc
agggtgacggcagcagacgcggggtcgcctcctctgacgagcacgcagaccttcaccgtg
gacatctcggatgtcaatgacaacgcccccgtcttcaaccagacgtcgtacaccatgtac
gtgcgtgagaacaatgtgcccacggtgtttgttggagccgtcagcgctgccgacgctgac
gtggggctcaatggcaaggtgagctattccctggcagcggtgcaagcggcagaggggcct
tggtgctcgtgcgtgtctgtgaactctgagaacgggcacgtgtttgtgctgcggcccctg
gactacgagcgcttgaggcagacggaggtgacggtcagtgcctctgacgcgggctctcct
cccctcagagccaacgtcagcgtccgcctcgtggtgctggacgagaacgacaacgccccg
ctcgtgctgtacccaggccaggacagcagcccagcgtccagtgagctggtgcccgtgtcg
gccgaggcgggctacctcatcaccaaagtggtggccgtggatgccgactccgggcagaac
tcgtggctctcgtaccacctgctgagggccagcgagccagggctgttcacggtgggtgtc
cacagcggggaggtgcgtctgaggaggccggtgacggagagagacagcgtgaggcagaag
ctccttgtcctggtcagagacaacggcaagccgcccctgtcggccacggcagctgtgagc
gcgctcctgctcaaggacttgtcagacgtgcgcctccccgggcacggcagcccggcccca
gaggatcaggctggctccctgaccacctatttaatcattgccctggtgtgtgtctccctg
ctcttcctcgtctccacggcactctttgtggctcgcaaggtgtgcaagagaaaggagctg
aaggctggccatgtgctttatggtgccgacaacttgcagagcggcctggccgatggggcc
gctgcagggagcctgccccgcgcttattgctacgagatcagcctcacaacgggctcgggc
aacagcgagttcaaattcctcaagcccatcctccccagcgtgccagcacagcactgcgcc
gtgggccacggcccggaggatgaacagcatttcccctgtgtccctgtcagcaccgaggac
acggcaccagacaatcctggcactctctctgcaggacacttcaattctctttccttcaac
tag
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