Pseudopodoces humilis (Tibetan ground-tit): 102109246
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Entry
102109246 CDS
T02921
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X3
KO
K13174
THO complex subunit 5
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03013
Nucleocytoplasmic transport
phi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102109246 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
102109246 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102109246 (THOC5)
03041 Spliceosome [BR:
phi03041
]
102109246 (THOC5)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102109246 (THOC5)
Spliceosome [BR:
phi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102109246 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
102109246
NCBI-ProteinID:
XP_005524573
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRTDGVPAEGKRGKGDTDQDVRYYSEESEVDLRDPIKDYELYRETCQ
ELQRLMAEIQELKSRGIKENASEIDERRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYKEAPPEISRPAITL
TEPHQQTLARLDWELEQRKRLAEKYKECLTSKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKAL
YKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTLDLKCKDENVL
HLTFHYLMNLNIMTVKAKVTTAMEMTTAISAGDLLSPDSLLNCLYPGDHGRKTPNPANQF
QFDKVGILTLSDYMTELGHPYVWVQKLGGLHFPKDQPQHTVAADNSLSASHMELTVKLLR
SRLQSRLALHKQFASLEHGVVPVSSECQQLFPTKIVSRLVKWTAIPYEDYAELPYTKDVI
EAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSTLPPVFSLCLNWKGERNSSNDDNIRA
MEREVNVYYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDPSVEGPKEFPQEKMCLR
LVRGPLRLKPFKFNYPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgagtccagcaagaagaggaagcccaaggtgatccgcacagacggggtccca
gccgagggcaagcggggcaagggcgacacagaccaggatgtcaggtactacagcgaggag
agcgaggtggatctgcgcgaccccatcaaggactacgagctctacagggagacctgccag
gagctccagaggctcatggcagagatccaggagctgaagagccggggcatcaaggaaaat
gcctccgagatcgatgagcggcgcgtccagagctgcgtccacttcatgaccctgaagaag
ctgaaccgcctggctcacatccggctgaagaagggcagggaccagacccatgaggcgaag
cagaaggtcgatgcctatcacctgcagctccagaacctgctctacgaggtgatgcacctg
cagaaagagatcaccaagtgcctggagttcaaatccaaacatgaggagatcgagctggtg
agcctggaggagttctacaaagaggccccccctgaaatcagccgccctgccatcaccctg
accgagccccaccagcagaccctggcccgcctggactgggagctggagcagcgcaagagg
ctggcagagaagtacaaggagtgtctgaccagcaaggagaagatcctgaaggagatcgag
gtgaagaaggaatatctgagcagcctccagcctcgactcaacagcatcatgcaggcctcc
ctgcctgtccaggagtacctgttcatgccctttgaccaggctcacaagcagtacgagacc
gcccggcacctcccgccgcctctctatgtcctcttcgtccaagccagcgcctacggacag
gcctgtgataagaagttggtggtggccattgaagggagtgtggaggaagccaaggccctt
tataagccacctgaagactcgcaggatgatgagagcgattccgacgcagaggaggagcaa
accacgaagcggcgcaggcccaccctgggcgtgcagctggatgacaaacgcaaggagatg
ctgaagagacaccccttgtcagtcaccctcgacctgaagtgcaaagatgagaacgtgctt
cacctgaccttccactacctgatgaacctcaatatcatgacagtgaaagccaaggtgacc
actgccatggagatgaccacagccatcagtgctggggacctgctctccccagactccctc
ctcaactgcctctatccaggggaccacgggaggaaaacgcccaacccggccaaccagttc
cagttcgataaagtgggcatcctgaccctgagtgactacatgacagagctgggacacccc
tacgtgtgggtgcagaagctgggtggcctgcatttccccaaggatcagcctcagcacacg
gtggctgctgacaattccctgagtgccagccacatggagctgacggtgaagctgctccgg
agccgcctgcagtcccgcctggccctgcacaagcagtttgcatccctggagcacggtgtt
gtgccggtgtccagcgagtgccagcagctcttcccgaccaaaatcgtctcgcgcctggtg
aagtggactgccattccctacgaggattatgctgagctgccctacactaaggatgtgata
gaggccggcttggctgaagacactcacctctattacatggccctgatagagaggggaaca
gccaagctccaggcggccgtggtgctgaatcccggttactccacgctgcctcccgtcttc
agcctgtgcctgaactggaagggagagcggaacagcagcaacgacgacaacattcgggcc
atggaaagggaggtcaatgtctactacaaggagctgtgggggcccaaacctggctaccag
ctcctcaccaaccagctgcagcgcctgtgcatggtgctggacgtgtacctggagacagag
ccccacgatcccagcgtggagggacccaaggaattcccccaggagaagatgtgtctgcgc
ctggtcaggggtcccctgcgcctgaaacccttcaagttcaactacccccaggggttcttc
agccatcgctga
DBGET
integrated database retrieval system
