Pseudopodoces humilis (Tibetan ground-tit): 102109281
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Entry
102109281 CDS
T02921
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102109281 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phi03009
]
102109281 (POP1)
03016 Transfer RNA biogenesis [BR:
phi03016
]
102109281 (POP1)
03029 Mitochondrial biogenesis [BR:
phi03029
]
102109281 (POP1)
Enzymes [BR:
phi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
102109281 (POP1)
Ribosome biogenesis [BR:
phi03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
102109281 (POP1)
Transfer RNA biogenesis [BR:
phi03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
102109281 (POP1)
Mitochondrial biogenesis [BR:
phi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
102109281 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
102109281
NCBI-ProteinID:
XP_005517056
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MSGAREKKRAKKMRNQPASVTLPAEPGPFAGGGSRACPPPGDVHSEQQQKFSNQSSGPAY
RKDQYFSKGQSKGERGRGAWHGGHQSVSEEMPKYITVSTFAQARAAEINAMLKAVSQKSS
NSLVFQTLPRHMRRRAMSHNVKRLPRRLQEMARKEAEKAVHQKKEQSKTKCRKARRRHIN
LVAEFNHRQRKNIWLETHIWHAKRFHMVKKWGYCLGNSPTEKSYRACYRAMTKHCLLQDL
SYYCCLELKGKENELLKQLARICSIDTGLTFQEACCLSGTFEGSLNLYRADRYPEDMLGP
VTFIWKPRDGSENRQLWIWVHPALKQDILRELKAIFQCSEPEEICITEPVTTSIQEEKQV
EVVTSLGNKRKKEDKEGEKAVPVKKIIGDGTRDPFQSYSWIARTTGIAISDRSMEILRYR
LIGPLSHSVLTETLKAASVQTEMADSETELNNWWVENCKDSEKVSLHQCQSGIFELLEGM
SSPSDMPPGTILGLTVGDPRVNLPKKKTKAMPDFEKYRDNDKVRQLYLKGVPADCAHSFI
WDHDICKNVTENKISEQDLNHMRAQLLVPGSHLDLGPCESKIPILLVQQPGKIAGEDRPG
WGSGWDIYLPKGWGMAFWIPFIYRGVRVGGLQEALKHSEYQRTPHTPNDFPDCQAGMQFA
KELETSLLEKFKRRPPAKRANYVKLGTLSPFICPWGQLTKNWEERMKASGGLLCPSSPRT
YCCTTEGQTLCDPKAEAVRKASPKTGEEEETMEITSSESALKTEDVTSTQDFGERDETKT
SDFIVLRSEKLLMQLSAWCYPTAGKDRRIRLISRLGQKEMTEDVFLPILMSYPRALVWVN
LSLLRKGNPELHAMICIPTEDDLLHLSKDKLFCGPQEPKHRDIFKDKVRKQKEEKRKKKD
NVKSLESDPAGIPDEEATEDHEDLILGLWSDALPDVTSHCSRTVLGYVTRGDFSLAAGCG
EALGFVSLTGLIYMLHNQPADKKGLVLLRTPASLQYRFARLNIEV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggcgcgggagaagaagcgagccaagaagatgaggaatcagccggccagcgtc
acgctgcccgcagagccggggcccttcgccggtggcgggagcagagcctgcccgccccca
ggagatgttcattctgagcagcagcagaaattttcaaatcagtcatctgggcctgcttac
aggaaggaccagtatttttcaaaggggcaaagtaaaggagagagaggcagaggagcatgg
catggaggacaccaaagtgtatctgaggaaatgccgaaatacataacagtgtctaccttt
gctcaagctcgtgctgctgagatcaatgccatgttgaaagcagtttcgcagaagtcttcc
aactctctggttttccagaccctccccaggcacatgcgaaggcgagcaatgagtcacaat
gttaaacgcctacccaggcggctccaagagatggccaggaaagaggcagagaaagctgta
catcagaaaaaagaacagtcaaagactaaatgccgcaaagctagaagacgacacataaat
ttggtagcagagtttaatcacaggcaaagaaagaatatttggctggaaacccatatttgg
catgcaaagagatttcatatggtaaagaaatggggatactgtttaggaaacagccctaca
gagaagagctacagggcttgttaccgagccatgacaaagcactgccttcttcaggactta
tcatattattgttgcctggagttgaagggtaaagagaatgagcttctgaagcaacttgct
cgaatatgtagcattgacacaggattgacatttcaagaggcttgttgtctgtctggaaca
tttgagggttccctgaatctttacagagcagatcgctatcctgaggatatgcttggtcca
gttacatttatttggaaacccagggatgggtctgaaaacagacagttgtggatttgggtg
catccagctcttaagcaggatatacttagggagttaaaagcaatttttcagtgttcagag
cctgaagaaatctgtattactgagcctgttacaacatcaattcaagaggaaaaacaagtg
gaagttgttacaagccttggcaataaaagaaagaaggaggataaagaaggagaaaaagct
gtgccagtgaaaaaaataattggtgatggcactagagatccattccagtcctactcttgg
atcgcacggactactggcattgcaatcagtgacagaagcatggagattctcagataccgg
ctgatcggcccattatcacactccgtccttacagagaccctgaaagcagcttctgtccaa
acagagatggcagattcagagacagaactgaataactggtgggtagaaaactgcaaggac
tctgaaaaagtatctcttcatcaatgtcagagtggtatctttgagctattggaagggatg
agctcaccatcagatatgccaccaggtacaatacttggcctcactgttggagatcctcga
gtcaatttgccaaaaaagaagacaaaagccatgccagactttgaaaaataccgagataat
gataaagttaggcagctgtacctgaagggtgtacctgcagactgtgctcacagctttatc
tgggaccatgacatctgtaagaacgtcactgaaaataaaatctcagagcaggatttaaac
catatgagagctcagttactggtacctggatcacaccttgatttgggtccttgtgaatct
aagattcccatactgttggtgcagcagccaggaaaaatagctggagaagatcgaccagga
tgggggagtggctgggacatctatctcccaaagggctggggcatggctttctggattcct
tttatatatcgaggtgtacgagtcggtggcttgcaagaggcattaaagcattctgaatac
caaagaacgcctcacactccaaatgatttcccagactgccaggcaggaatgcagtttgct
aaagaactggaaaccagtcttcttgaaaaattcaaacgacgtccacctgcaaaaagggca
aattatgtcaagctgggcactctgtctcctttcatctgtccttgggggcagctgaccaag
aactgggaagaaagaatgaaagcttcaggaggacttttatgtccttcctccccacgtact
tactgctgcacaactgaagggcagaccctttgtgaccccaaagcagaagcagtcagaaaa
gcttcccctaagactggtgaggaggaggagaccatggaaataacaagttctgaaagtgcc
ctaaagacagaggatgttacaagcacccaagattttggtgagagagatgaaactaagaca
agtgactttattgttctcaggagtgagaaactactaatgcagttatcagcctggtgttac
cccactgctgggaaagatcggcgaatccgccttatttctcgtctgggacagaaggaaatg
actgaagatgtttttttgccaatcttgatgagctacccaagggctcttgtctgggtcaac
ttgtcgctcttgagaaaggggaaccctgaattacatgccatgatttgcatcccaacagaa
gatgacttgctgcatctaagcaaagacaagctcttctgtggtccacaagagcccaaacat
cgtgacatattcaaggacaaggtacggaagcaaaaagaggagaagaggaagaaaaaggac
aacgtgaagtctctagagagtgaccctgcaggcattccagatgaagaggcaactgaggac
catgaagatctcattcttggtctttggtcagatgctctcccagatgttacttcccactgc
tccaggactgtcttggggtatgtcactcgaggggatttttcattggctgcaggctgtgga
gaagcactgggttttgtcagcttgactgggttaatttatatgttacacaaccagccagca
gataaaaaagggcttgttttgttaaggactccagcatctttacagtacagatttgcaaga
cttaatattgaggtgtaa
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