Pseudopodoces humilis (Tibetan ground-tit): 102109288
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Entry
102109288 CDS
T02921
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_5
Motif
Other DBs
NCBI-GeneID:
102109288
NCBI-ProteinID:
XP_005520790
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSNLGKEKDCKEKDPKVQSSKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHLLPSAIK
ELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaacctaggaaaagaaaaggactgcaaagagaaggatccaaaagtccagtca
tcaaaagaaagggagaaggaggctaaggcctcaggaggatttgggaaagagagcaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaagaaggactccagtagcacg
cagcctggggtagctttttcagtggacaatacaataaaaagacctaatcctgccacaggt
actcgcaaaaaatccagcaacgctgaagtgatcaaagagctaaataaatgccgggaagag
aattctatgcgcttggacttgtccaagaggtctatacacttgcttccatcagctatcaaa
gagctaacgcagttaacagaactttatttgtacagtaacaaactgcagtgcctaccggca
gaggtgggctgtcttgtgaacctggtgacgctggctctgagtgaaaactcactcaccagt
ttgcctgactctcttgataacttgaagaaactgcgcatgcttgacctgcggcataacaaa
ctgagagaaatcccctcggtggtgtacaggctaagctccctcgccactctgtacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgagagaacaaaatcaagcaactacctgctgaaattggtgagttgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacatcttccagaagagattggaagctgc
atgcagatcaccaaccttgacttgcagcacaatgagctcctggacctgccagaaaccata
ggaaatctgtccagtctaagtcggcttggcctgaggtacaataggctgtcagcaattccc
aagtctttagcaaaatgcagtgaacttgatgagctgaacttggagaacaacaacatttct
actttaccagagggtcttttatccagccttgtcaaactgactagtttaacattggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aatatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacgtctctccccctggactttgggact
tggacaagtatggtagaactgaacttagcgactaaccagctcacaaaaatccctgaggat
gtatctgggcttgtttctcttgaggttcttatcttgtcaaacaatctcctaaagaaactt
ccccatggaattggaaatctgcggaaactccgagagttagatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaac
aatcagctgaccacccttcccagaggaatcggtcaccttaccaatctgacgcaccttggg
cttggagagaaccttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccgctcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcattcagttcctaaaaatgcagggaccatatcgtgcc
atggtctga
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