Pseudopodoces humilis (Tibetan ground-tit): 102109315
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Entry
102109315 CDS
T02921
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102109315 (RC3H2)
04121 Ubiquitin system [BR:
phi04121
]
102109315 (RC3H2)
Transcription factors [BR:
phi03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102109315 (RC3H2)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102109315 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
102109315
NCBI-ProteinID:
XP_005529234
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIANLETGVPQLIPRCADTSLRALENTKKGGKTGANGQNASGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPAPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQPSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSA
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYPEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQEDQLLNGTTVENGHLLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFS
QPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaatgaa
tttgatgagaatgtgcacaaacccatcagcttaggctgctctcacaccgtgtgcaagacc
tgcctgaacaagctccatcgcaaggcatgtccttttgaccagactgccatcaacacagac
atcgatgtgcttcctgtgaactttgcactcctccagctggttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggcgagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtcccatgcagaggaagcttgtgacactggtaaattgt
cagctggtggaggaggagggtcgggtcagagccatgagggcagctcggtcgctgggagag
agaactgtcacagaactcatcctgcaacaccaaaatcctcagcagctttctgccaatctc
tgggctgctgtcagggcacgagggtgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctggaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagagatgaagat
tcttctctgatgcaacttaaagaagagttccggagttacgaggctttgcggagagagcat
gatgcccaaattgttcacattgccatggaagcaggacttagaatatcaccagaacagtgg
tcttctcttctttatggagacctggcacataaatcacacatgcaatccattattgacaag
cttcaatctccagaatcttttgctaagagtgtacaagaattgacaattgtcttgcagcgg
acgggggatcctgcaaacttaaacaggcttaggcctcatttagaactcctggcaaacata
gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggttgct
gtaaagactgtggtccatgggctggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgtgaccttcga
cagcaaggggggtgtccaagaggaacgaattgtacatttgctcattctcaggaagagctt
gaaaaatatcgcttgaggaacaaaaaaatcagcgcaacagtgagaacattcccccttcta
aataaagttggcgtaaacagcaccgtctcaaccacaacaggaaacgtgatctctgtcata
ggaagccctgaggcaacgggcaagatggtgccaagtactaatggaatagcaaatctagaa
actggggttccccagctgatcccccgctgtgcagacacctccctgagagctctggagaac
accaagaagggagggaagactggagccaatggacagaacgcttctgggtcccctacagaa
tcacttcctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccgtttgttcccagagtacctgtctaccctccacattctgataatgttcaatatttccaa
gatcccaggactcagctgtcatatgaagttccacagtacccacagacagggtattatcca
gcacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgcagatcattacagtaca
tttccccctcgagatcgactgaattctccctaccagcctcctcctccgcagccgtatgga
ccagtccctcctgtcccctctggaatgtacgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagccatcattacgggagaggtacaactctctggatggg
tattactctgtggcttgtcaacctccaaacgagcagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggttatgatgagcagctgagacggaagccagagcaatgg
gcacagtaccacacacagaaaacacctctggtatcgtcaacccttcctatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattccaatgccgtgttaatggatttggacagtggggatgttaaaaggagagtgcat
ttatttgaaacgcagagaagggcgaaggaagaagatcctataatcccgtttagtgatgga
cccatcatctccaagtggggtgcaatctccaggtcatcccgcacaggttatcacacaaca
gatccaatccaggccactgcttcccaaggaagtgctactaagcccatcagtgtatcagat
tatgtcccttatgtcaatgctgtagactcaagatggagtgcctatggctcagattctgcc
tcctcagcacgttatgcagaacgggacaggtttatagtcacagatttgtctggtcacaga
aagcattccagcactggagatctactgagtattgaattacagcaggccaaaagcaactcc
ttactccttcagagagaggcaaatgcactcgccatgcagcagaagtggaattctctagat
gaaggcagtcgtcttaccttaaaccttttaagcaaggaaattgatttgaggaatggtgag
actgattatcctgaagactgtgcagacacaaagccagaccgagacattgaattggagctg
tcagccctcgatacagacgaacctgatgggcaaggtgaacagatagaagagattctggac
atacagctagggattagctcccaagaggatcagctgctcaatggaacaaccgtagagaat
gggcatctgctaaagcagcaccagaaagaatctatggaacagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
