Pseudopodoces humilis (Tibetan ground-tit): 102109373
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Entry
102109373 CDS
T02921
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phi03036
]
102109373 (DDX4)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102109373 (DDX4)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102109373 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
102109373
NCBI-ProteinID:
XP_005531225
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MIEEDWNAEIGDEALLRSLEKVSLLERPNDPSSVFSPSVDSFDTDEFVNTQHQPVSSFGR
GRNFAAKGFQEGNGEDALTQNRGFKGFGQGFHERNAVDGASTQNRGFKGFRSGFGQGVQE
GSGEDALTQNRGFKGFRGGFGQGFQERKAVDGASTQNRGFKGFRGGFGQGTRDGQRDIPQ
SGALRERGTLADGAGVQEGNGEDALTQNRGFKGFRGGFGQGEGFQERKAVDGASTQNRGF
KGFRGGFGQGTKGGQGDIPQSGTPSSRERGTLTDGAGPKVTYVPPPPPEDEQAIFARYQT
GMNFDKYDENVVEVSGLDPPAALMSFADTNMCHTLTVNIAKAGYSKPTPVQKYSIPIILA
GRDLMACAQTGSGKTAAFLVPVVAQMMRDGVTASSFKEQQEPECIITAPTRELVNQIFLE
ARKFVYGTCIRPVVIYGGTQTDYSIRQVKQGCNILCATPGRLLDIIGRGKIGLHNVKYLV
LDEADRMLDMGFGADMKKLVSFPDMPQKDKRQTLMFSATFPEEVQRLAGEFLKTDFLFVV
VGHVGGACSDVQQNILQVSQYFKRDKLIEILHSIGNERTLVFVDTKKKADFIACFLCQEN
IPATSIHGDREQREREIALRDFRSGKCPVLVATSVAARGLDIESVQHVINFDLPSTIEEY
VHRIGRTGRCGNTGKAVGFFDNNSDGHLAQPLIKVLSDAQQEVPVWLTEIAFESEGGRLP
VHNQKNYRGRGSVNAGEVRMECSAREIESWD
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagaagactggaatgcggagataggggacgaggcgttgctcagatcccttgag
aaggttagcttgcttgagagaccaaatgacccctcatctgttttcagtccaagtgtagac
tcctttgatactgatgaatttgtgaatacccagcatcagccagtgagtagttttggtaga
ggaaggaattttgcagccaaaggtttccaagaaggaaatggagaagatgcccttacacaa
aacagagggtttaaaggatttggacaaggttttcatgaacgaaacgctgtagatggtgct
agtacacagaacagagggtttaaaggatttcgcagtggctttggacaaggtgttcaagaa
ggaagtggagaagatgcccttacacaaaacagagggtttaaaggatttcgtggtggcttt
ggacaaggttttcaagaacgaaaagctgtagatggtgctagtacacagaacagagggttt
aaaggatttcgtggtggctttggacaaggtactagagatggacaaagggatatacctcag
tctggagctctcagggaaagaggaactctcgcagatggtgcaggtgttcaagaaggaaat
ggagaagatgcccttacacaaaacagagggtttaaaggatttcgtggtggctttggacaa
ggtgagggttttcaagaacgaaaagctgtagatggtgctagtacacagaacagagggttt
aaaggatttcgtggtggctttggacaaggtacaaaaggtgggcagggggacatacctcag
tctggaactcccagttctagagaaagaggaacactcacagatggtgcaggtccaaaggtg
acttacgtaccccctcctccacctgaggatgaacaagccatctttgcacgttatcagaca
ggaatgaattttgacaaatatgatgaaaacgttgttgaagtgtcaggactggaccctcca
gcagcgttaatgagttttgcagacactaacatgtgtcatactttaactgtgaacattgct
aaagctggatactctaaacctactccagtacagaagtacagcattccgattatactggca
ggacgggatttaatggcatgtgcccagacaggatcaggaaaaactgcagcctttcttgta
ccagttgtggcccaaatgatgagggatggtgtaactgccagtagctttaaagagcagcaa
gaaccagaatgtattattactgccccaactagagaactggtaaatcagatcttcctagaa
gcaagaaaatttgtgtatgggacttgcataaggcctgttgtgatctatggaggtacacaa
acagactattcgattcgtcaagtaaagcaaggctgtaatatactgtgtgccactccagga
aggcttctagacatcattggaagaggaaagattggtttgcataatgtgaaatacttggta
ctagatgaagcagaccgcatgcttgatatgggttttggtgcagatatgaagaagctggta
tctttcccagacatgccacagaaagacaaacgccaaacactaatgtttagtgccactttt
cctgaggaagtacagaggctagctggtgaatttttgaaaactgactttttatttgttgtt
gttggacatgtgggtggagcatgcagtgatgttcagcagaatattcttcaagtttctcag
tatttcaagagggataaactgatagaaattctacacagcataggtaatgaacgaactctg
gtctttgtggacacaaagaaaaaagcagacttcattgcatgctttctttgtcaagaaaac
ataccagctactagtatccatggagatagagaacagagagagagagaaatagctcttcgg
gattttcgttctggaaaatgtccggttcttgtggcaacctcagtggcagcaagaggtcta
gacattgaaagtgttcagcacgttattaattttgatcttccttccaccattgaagagtat
gtacaccgaattggacgaactggtcgttgcggaaatacagggaaagcggttggcttcttt
gataacaattcagatggtcatcttgcacagcctctaattaaagtgctttcagatgctcag
caggaagttcctgtttggttgacggaaattgcgtttgagtctgaaggaggacgactccca
gttcataaccagaagaattacagaggcagaggcagtgtgaatgcaggagaagtaaggatg
gagtgttctgcaagagaaatcgagtcatgggattaa
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