Pseudopodoces humilis (Tibetan ground-tit): 102109389
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Entry
102109389 CDS
T02921
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03018
RNA degradation
phi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102109389 (LSM2)
09123 Folding, sorting and degradation
03018 RNA degradation
102109389 (LSM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102109389 (LSM2)
03041 Spliceosome [BR:
phi03041
]
102109389 (LSM2)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102109389 (LSM2)
mRNA degradation factors
5'-3' decay
Lsm complex
102109389 (LSM2)
Spliceosome [BR:
phi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102109389 (LSM2)
Complex C
U2 snRNP components
102109389 (LSM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
102109389
NCBI-ProteinID:
XP_014117988
LinkDB
All DBs
Position
Unknown
AA seq
103 aa
AA seq
DB search
MSWEYRGDILFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYP
HMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggaatatcgtggggatatcctcttctactccttcttcaagtccctggtgggg
aaggacgtggtggtggagctcaagaacgacctgagcatctgcgggaccctgcactccgtg
gatcagtacctgaacatcaaactgaccgacatcagcgtcacggaccccgagaagtacccg
cacatgctctcggtcaagaactgcttcatccgcggctccgtggtgcgctacgtgcagctc
ccggcggacgaggtggacacgcagctgctgcaggacgcggcgcgcaaggaggcgctgcag
cagaagcagtga
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integrated database retrieval system
