Pseudopodoces humilis (Tibetan ground-tit): 102109398
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Entry
102109398 CDS
T02921
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04010
MAPK signaling pathway
phi04517
IgSF CAM signaling
phi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102109398 (RAPGEF2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102109398 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102109398 (RAPGEF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
cNMP_binding
PDZ
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
102109398
NCBI-ProteinID:
XP_014117488
LinkDB
All DBs
Position
Unknown
AA seq
1654 aa
AA seq
DB search
MASYVDNSFRQAVMKNPAERSPQDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVV
DYMEENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTECTKP
QLPADFTKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEAGDMDLSGLP
ETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDGRTEILCMGNSF
GVSPTMEKEYMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTAERLTMHLVEEHSVVDPTFIEDFLLTYRTFLSSPMEVGKKLLEW
FNDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEREKMGGHLRLLNIACAA
KAKRRLITLTKPSREAPLPFILLGGSEKGFGIFVDSVDFGSKATEAGLKRGDQILEVNGQ
NFENIQLTKAMEILRNNTHLSITVKTNLFVFKELLARLSEEKRNGAPHLPKIGDIKKASR
YSIPDLAVDVEQVIGLEKVNKKSKANTVGGRNKLKKILDKTRISILPQKPYNDIGIGQSQ
DDSIVGLRQTKHIPPALPVSGTLSSSNPDLLQSHHRILDFNTTPELPDQVLRVFKADQQS
RYIMISKDTTAKEVVIQAIREFALTATPDAYSLCEVSVTPEGVIKQRRLPDQLSKLADRI
QLSGRYYLKNNMETETLCSDEDAQELLRESQISLLQLSTVEVATQLSMRNFELFRNIEPT
EYIDDLFKLKSKTGCTNLKKFEEVINQETFWVASEILRETNQLKRMKIIKHFIKIALHCR
ECKNFNSMFAIISGLNLAPVARLRTTWEKLPSKYEKLFQDLQDLFDPSRNMAKYRNVLNS
QNLQPPIIPLFPVIKKDLTFLHEGNDSKVEGLVNFEKLRMIAKEIRHVGRMASVNMDPAL
MFRTRKKKWRSLGSLSQGSANAAVLDVAQAGGHKKRVRRSSFLNAKKLYEDAQMARKVKQ
YLSNLDLEMDEESLQTLSLQCEPATNTLPKNTGDKRSGKSETSPVAPRAGIQQKVQQQQQ
HKVNQALQVPAVSLYPSRKKVPVKDLPPFGINSPQALKKILSLSEEGSLDRHKKQSEDAV
SSASSQLSSPPTSPQSSPRKGYTLAPSSTVDNFSDSGHSEISSRSSIVSNSSFDSMPVSL
HDERRQRHSVSIVETNLGVGRIDRRIMIEPDQYSLGSYAPLSETRGLYAGATVLSSPSTE
ELSQDQGDRASLDAADSGRGSWTSCSSGSHDNIQTIQHQRSWETLPFGHAHFDSSGDGAG
LWASGGHMDQLMFPDHGTKYGRQSQGREGLDQAQSRASWASSTGYWGEDSEGDTGTIKRR
GGKDVSVEAETSNITSVPAEETKPAPVPAHTAAAAASSSTKGLVARKEGRYREPPPTPPG
YVGIPITEFAEGGSHPTRKPPDYNIALQRSRMVARTCETHGTATPQQQSHGHSTGRPVNK
PQWHKPNESDPRLAHYPSQGFSTEEDEDEQVSAV
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacgtggataacagcttccgccaggcggtgatgaagaacccggcggagcgg
agcccccaggacttggagattgtgtattcatatttacatggaatggaagcattgtctaat
ctgagagagcatcagctaagactgatgtgtgaaactgttagatacgaaaggcatgaagca
aatgaagtactgtactaccctgatgatattggtacctgttggtatatcctgctgtctggt
tcagtcttcattaaagaatccatgtttcttccaaggagcagttttggcaagcgttctgcc
ggcagcttcagacgtggatgtgaatgcattgttttagagccatctgaaatgattgtggtt
gattacatggaagaaaatgaggagtatttccagcgtcaagcatctcacaggcaatctcga
agaaggttcaggaaaatcaaccagaaaggggagcgacaaacaattattgatactgttgac
ccttatcctgtggggaagccacctctacctagaggctaccatacggaatgcactaaacct
cagcttcctgcagatttcacaaagctgcaccttactgacagtctccacccacaggtgacc
cacgtttcatctagtcactcaggatgtagcatcactagtgattcaggaagcagcagcctt
tctgatatctaccaggctacagaaagtgaggctggtgatatggatctcagcggattgcca
gagacagcagtggattctgaggacgatgatgatgaagaagacattgaaagggcatcagat
cctttgatgagtagggatattgttagagattgcttggagaaagacccaatagacaggaca
gatgatgacattgaacaactactggaattcatgcatcaattgcctgcttttgccaacatg
acaatgtcagtgaggagagaactctgtgctgtaatggtgtttgcagttgtggagagagca
ggaactattgtactaaatgatggggaagagctggattcctggtcagtcattttgaatggc
tctgtggaggtgacataccctgatggaagaacagagatattgtgcatggggaacagtttt
ggtgtttcccctacaatggaaaaggaatatatgaaaggagtgatgagaaccaaagtggat
gactgccagtttgtttgtatagcccagcaagattactgccgcatcctcaatcaagtggaa
aagaacatgcagaaggtagaagaggaaggggagattgtgatggtgaaggagcacagggag
cttgaccgcactggaacaagaaaaggtcacattgtcatcaagggaacagctgaaaggtta
acaatgcatttggtggaagagcactctgtggtagacccaacatttatagaagacttcttg
ttgacgtataggacctttctttccagcccaatggaagtgggcaagaagttgttggagtgg
ttcaatgaccccagcctcagggataaggttacacgggtagtattgttgtgggtgaacaat
cacttcaatgattttgaaggagatcctgctatgactcgatttctggaagaatttgagaac
aatttggagagggagaaaatgggtggacatttgaggctgttaaatattgcttgtgctgct
aaagctaaacgaagattgataaccttaacaaagccatctcgagaagcccctttgcctttt
atcttgctgggagggtcagaaaagggatttggaatctttgttgacagtgtagattttggt
agcaaagctacagaagcaggcttgaaacgtggagaccagatattggaagtaaatggtcaa
aattttgaaaacattcagctgacaaaagccatggaaatccttagaaacaacactcatctg
tctatcactgtgaaaacaaatttatttgtttttaaagaactcttagcacggctgtcagag
gaaaaaagaaatggtgctccccacctgcctaaaatcggtgatatcaaaaaggcgagtcgt
tattccatccctgaccttgctgttgatgtggagcaggtaataggattagaaaaagtaaat
aagaaaagtaaagccaacacagttgggggaagaaataagttaaagaagatacttgacaag
actcgaatcagtattctgcctcagaaaccatacaatgacattggaattggccagtctcag
gatgacagcattgtgggactgaggcaaacaaagcacattcctccagctttacctgtcagt
ggaaccttgtcatccagtaatcccgacctgctgcagtctcatcaccgcatcttagacttt
aatactactccagaattaccagaccaagtcctgcgggttttcaaggcagaccagcaaagt
cgctacataatgatcagcaaggacacaacagccaaggaagtggtcatccaggccatcagg
gaatttgctctcactgcaacccctgatgcctattcactgtgtgaagtctctgtcacacct
gagggtgtcatcaagcaaaggaggcttcctgatcagttgtccaagcttgctgacaggata
cagctgagtggcaggtattacctgaagaacaacatggaaacagaaactctttgttcagat
gaagatgctcaagagttactaagggaaagccagatttccctactacagctcagtactgtt
gaggtggctacccaactctccatgagaaacttcgagctgttccgtaatattgaacccacg
gaatacatagatgacttgtttaaactcaaatcaaaaacaggctgcactaatctaaaaaag
tttgaagaggtgataaatcaagagacattctgggtggcttctgagattctaagagaaacc
aaccagctgaaaaggatgaagatcattaagcattttattaagatagcgctacactgcaga
gagtgcaagaacttcaactcgatgtttgccatcattagtggcctgaatttggcaccagtt
gcaaggctccgaactacttgggaaaagcttccgagcaagtatgaaaaactgtttcaagat
ctgcaggacttgtttgatccatccaggaatatggcaaaatatcgtaatgtccttaacagc
caaaacctacagccccctattatccccctgtttcctgtcatcaaaaaggaccttacattc
cttcatgaaggaaatgattctaaagtggagggcctggtgaattttgagaagctgcggatg
attgcgaaggagatacgccatgttggtcgcatggcgtctgtgaacatggatcctgctctc
atgtttagaacaaggaagaagaaatggaggagtttggggtctctcagccagggcagtgcc
aatgcagcagtgctggatgttgcacaagcgggggggcataaaaagcgggtccgtcgcagc
tcctttcttaatgctaaaaagctctacgaggatgctcagatggcacggaaagtgaagcag
tatctctcaaacttggatctggaaatggatgaagagagcctccagactctctctctgcag
tgtgagccagccacgaacacactgccgaagaacacaggagacaagcgatctgggaaatct
gaaacgtcaccagtggctccccgggcaggcatccagcagaaagtgcagcagcagcagcag
cataaagtaaaccaagcactgcaggtcccagccgtgtctctttatccctctcgcaagaaa
gtgccagtcaaagacctcccaccatttggcattaactccccacaagctttaaagaaaatc
ctttcattatcggaagaaggaagtttggatcgtcacaagaagcaatctgaagacgctgtc
tcaagtgcatcttcacagttgtcttctcctcctacttcaccacagagctctccaaggaaa
ggctacactttggctccaagcagcaccgtggataacttctccgattctggtcacagtgaa
atttcttctagatctagtattgtcagcaattcctcttttgactctatgccagtctccttg
catgatgagaggagacagaggcattctgtcagcattgtggagacaaatcttggtgtggga
aggattgatagaagaatcatgattgaaccagatcagtacagtttaggctcatatgcaccg
ctgtcagagaccagaggcctgtatgctggagcaactgtactttcttctcctagtacagaa
gagctgtcacaggaccagggggacagagcttcgctcgacgcagctgacagtggccgtggt
agctggacttcttgttcgagtggttctcacgataacatccagacaatacagcaccagagg
agctgggagactctgccttttggacatgctcattttgatagttcaggcgatggggcagga
ctgtgggcctcaggcggccatatggaccagctgatgttccctgaccacggcacaaagtat
ggcaggcaaagtcaaggtagggagggccttgatcaagcacagtccagagcaagctgggca
tcttccacaggatactggggagaggactccgagggtgatacaggtaccataaagcggagg
ggtgggaaggatgtttcggttgaagctgaaaccagtaacataacatctgtaccagcagag
gagacaaagccagctcctgtccccgctcacacagcagcagcagcagcatcaagtagtaca
aaggggcttgttgcaagaaaagagggtcgatatcgggaaccacctccaacccctcctggt
tatgtaggaatacctattactgagtttgcagaaggtggctcccatccaaccaggaagcct
ccagactacaacatagcacttcagaggtccagaatggtggcacggacatgtgagactcat
gggacagcaactccacagcagcagtcgcatggccactcaactggcaggcccgtgaacaaa
cctcagtggcataaaccaaatgagtcagatccacgacttgctcactatccatctcaaggt
ttttccacagaggaggatgaagatgaacaagtctctgctgtctaa
DBGET
integrated database retrieval system
