Pseudopodoces humilis (Tibetan ground-tit): 102109592
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Entry
102109592 CDS
T02921
Symbol
EFTUD1
Name
(RefSeq) elongation factor Tu GTP-binding domain-containing protein 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102109592 (EFTUD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phi03009
]
102109592 (EFTUD1)
Ribosome biogenesis [BR:
phi03009
]
Eukaryotic type
Pre-60S particles
GTPases
102109592 (EFTUD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
EFG_IV
DUF8042
Motif
Other DBs
NCBI-GeneID:
102109592
NCBI-ProteinID:
XP_005521607
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MVLTSVGRMVGLQKKASGIRNICILAHVDHGKTTLADCLISSNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHFVKGDQEYLINLIDSPGHVDFSSEVSTAVRLCDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKLTPQEAYLHLKNILEQINAVTGTL
FTSKVLEERAEKETENESVSDMSPGDQVYDWSTGLEDTDDSHLYFSPEHGNVVFASAIDG
WGFGIEHFAKLYSQKIGIKPAVLLKTLWGDYYLNTKAKKIMKGDQSKGKKPLFVQLVLDN
IWSLYEAVMKRDKEKIEKIVTSLGLRIGARESRHADPKVHLNAICSQWLPISDAVLSMVC
NKIPSPLDITAERVEKLMCVGARTFDSLPPETQELKSAFMKCSSEGTAPVIVFVSKMFPV
DAKALPQNKPRPLTQEEIAHRRELAKRRHAEKLAASQGKELSEKPPSENSPEVTGNTGDT
KGEEQQLTGQGDSMTSKAVKQEADKEYFIAFARVFSGVVKRGQKIFVLGPKYDPAESLHK
LSSQCSAIDDLPAVPHMTCCTLENLYLLMGRELEDLEEVPAGNVLGIGGLQDFVLKSATL
STSPACPPFTPLNFEATPIVRVAVEPKHPSDMPQLVRGMKLLNQADPCVQVLIQETGEHV
LVTAGEVHLQRCLDDLKERFAKVQISVSAPIIPFRETITRPPKVDMVNEEIGKQQKVAVI
HQTKEDQNKIPEGILVDSDGLVTISTPNKQATLSVRAVPLPEEVTRLLEENSDLIRTMEQ
LNTSLNEDKKTHEINQKTLDRIKEFKQKLEKSLQGRKWRNAVDQIWSFGPRKCGPNILLH
NFGGYKRSVWQCLGSSVKEVGKYRDFDNSIISGFQLATLSGPMCEEPLMGVCFTVEKWEI
SKAGDTLSNSRQDSGELDATEHHQNEDDTPASSCIDEGPGANEHQDRNPTGTNSPEKMSK
HKGELLLADCYGPFSGQLIATMKEACRYALQAKPQRLMAAMYTCEIMATAEVLGRVYAVL
SKREGRVLQEEMKEGTDVFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIISSD
PFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSRNK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcacaagcgtgggaaggatggttggcctccagaagaaggcgtcgggcatcagg
aatatctgtatattggcccacgtggatcacggcaaaactactctagctgattgccttata
tctagcaatggaataatctccagccgcttggcaggaaagctgagatacctcgacagtagg
gaagatgaacagatccgaggaataacaatgaaatctagtgcaatttcactgcactttgtg
aaaggtgatcaggagtatctgattaatttaatagactccccagggcacgtggatttttct
tcagaagtatctactgctgtccgactctgtgatggttgcatcatagtggtggatgctgtt
gaaggagtctgtccacagactcaagcagtcctgcggcaggcatggctggaaaatatccgt
ccagtcctggtgattaacaaaatcgaccgcttgattgtggagctgaagctcacccctcag
gaagcatatctgcaccttaagaatatcttagaacagatcaatgcagtcactggaacactt
tttacgtctaaagtattagaagaaagagctgaaaaagaaacagaaaatgaaagtgtttca
gacatgtcaccaggggatcaggtttatgactggagtactggattggaagacactgatgat
tcacatctctatttttcaccagaacatggaaatgtggtgtttgccagtgcaattgatggc
tggggttttggaattgaacattttgccaaactgtacagccaaaaaattggaatcaagcct
gcagtacttctgaagactttatggggagattattatctaaatacaaaagcaaagaagata
atgaaaggtgatcagtcaaaaggaaagaaacctttgtttgtgcagctggtgctggacaac
atttggagtctgtacgaggctgttatgaaaagagacaaagaaaaaatagaaaagatagtc
acctctttgggattgagaattggtgcccgggagtcacggcatgcagacccaaaagttcat
ctaaatgccatttgtagccagtggctaccaatatctgatgcagttctctccatggtgtgt
aataaaattcccagtcctctggacatcacagcagagagagtagaaaagctgatgtgtgtt
ggagcaagaacatttgattctttgccaccagaaactcaggaactgaaaagtgcttttatg
aaatgcagtagtgaaggaacagccccagttattgtctttgtttccaaaatgtttcctgtt
gatgcaaaggcattgccacagaataaaccacggccattaactcaagaagaaattgctcat
cgacgcgaacttgccaaacgaaggcatgcagaaaaattggcagcaagtcaagggaaggag
ctgtcagaaaagcccccaagtgaaaactcacctgaagtaactgggaacactggtgataca
aaaggtgaagagcaacagctcactggtcaaggagatagcatgacctcaaaggcagtgaaa
caggaagcagacaaggagtatttcattgcttttgccagagtgttcagtggtgtggtgaaa
agagggcaaaaaatctttgttttaggaccaaaatatgatcctgctgagtctttgcataag
ctgtcatcccagtgctctgccatagatgacctgccagcagtccctcatatgacgtgctgc
actttggagaacctctacttacttatggggagagagcttgaagatcttgaggaagtgcct
gcaggaaatgttctgggaataggaggcctgcaagattttgtgctgaaatctgcaacactg
tcgacatcacctgcttgtccaccatttacacctctcaactttgaagctaccccgatcgtg
cgagtagctgttgagccaaaacatccaagtgatatgcctcagctggtcagagggatgaag
cttttaaaccaagctgatccatgtgtgcaagttttaatccaggagacaggagaacatgtg
ctggtgacagcaggagaagttcatcttcagcgctgcttggatgacctgaaagaaaggttt
gcaaaggtgcagattagtgtatctgctcctatcatacccttccgagagaccataacaaga
ccccccaaagtcgatatggtgaatgaagaaataggaaaacagcagaaagttgctgtcata
caccaaacaaaagaggaccaaaataaaattcctgaaggaattctggttgattcagatggg
cttgttacaattagtactccaaataaacaagctactctcagtgtaagagcagtgccactt
cctgaggaggtaactcgacttcttgaagaaaacagtgatttaattcgaactatggaacaa
ctcaacacatctctgaatgaagataaaaaaacacatgagatcaatcagaagactcttgat
agaatcaaagaattcaaacagaagttggagaaaagtcttcagggaagaaagtggagaaat
gctgttgatcagatctggtcgtttgggccgcggaagtgtgggcctaatattttgttacat
aattttgggggctataaaaggtcagtgtggcagtgccttgggagctctgtgaaagaagta
ggtaaatacagagactttgacaacagcataataagtggatttcagctggctacactttca
ggtcccatgtgtgaagagcctctcatgggtgtttgttttacggtggaaaaatgggaaata
agtaaagctggagatacgctgtcaaacagtaggcaggattcaggggagcttgatgccaca
gaacatcaccaaaatgaagatgatactccagcaagcagttgcattgatgaaggtcctggt
gcaaatgagcaccaggacaggaacccaactggcacaaactcacctgagaagatgagcaaa
cacaaaggagaattactgcttgcagattgttacggccctttctctgggcagctgattgcc
accatgaaggaagcctgtcgttatgctttgcaggcaaaaccacagagactcatggcagca
atgtacacatgtgaaatcatggctactgcagaagttttaggtcgtgtgtatgctgtgctg
tccaaaagggaaggcagagtgctacaggaggagatgaaagaggggacggatgtgtttatt
attaaggcagttctgccagtagcagaaagctttggctttgctgatgaaatcaggaagaga
accagtggcctggccagtccacagctggtgttcagccactgggagatcatttcgagtgac
ccgttctgggtcccaacaactgaggaggaatatttgcactttggggagaaggcagactcg
gagaaccaggcccgcaagtacatgaatgcagtgagaaagagaaaggggctgtatgtggaa
gaaaaaattgtggagcacgctgagaagcaaagaactctcagcagaaataagtaa
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