Pseudopodoces humilis (Tibetan ground-tit): 102109658
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Entry
102109658 CDS
T02921
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phi03000
]
102109658 (SOX18)
Transcription factors [BR:
phi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102109658 (SOX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox17_18_mid
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102109658
NCBI-ProteinID:
XP_005524837
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Position
19:complement(8471297..8475806)
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AA seq
417 aa
AA seq
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MNISESNYCREEIPQPRGDCSWVTAAVPAAEPGLAFPRPPGAASPSSRTPSPEPGFAFGP
GPGGAAPGAAPSRTPSPEPGYGYSPPAGRPEGKAAEDSRIRRPMNAFMVWAKDERKRLAQ
QNPDLHNAVLSKMLGQSWKALSASDKRPFVEEAERLRIQHLQDHPNYKYRPRRKKQAKKI
KRMEPNILLHNLSQPCSDNFSMSHHGGSQPGHPQPPPLNHFRELHSMGSDIENYGLPTPE
MSPLDVLEQTEPAFFPPHMQDDCNMMPFRGYHHHHQMEFPQEKCMGRDVAVPYTQTPSHL
ADAMRTPHPSSLYYNQMCSGTQNGLSAHLGQLSPPPEAHHMESVDHLNQTELWTDVDRNE
FDQYLNMSRTRPEASGLPYHVSLSKVTPRSISCEESSLISALSDASSAVYYSPCITG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatctgagtctaactactgccgagaggagataccgcaaccccggggcgactgt
tcatgggtcaccgccgccgtgccggccgctgagcccgggctcgccttcccgcgccccccg
ggagccgcctccccctccagccgcacgcccagccccgagcccggcttcgccttcggcccc
ggccccggcggcgcggcccccggagcggcccccagccgcacgcccagccccgagccgggc
tatggatacagccccccggccggccgccccgagggcaaggccgccgaggactcccgcatc
cgccggcccatgaacgccttcatggtctgggcgaaggatgagcgcaagaggctggcgcag
cagaaccccgacctgcacaacgccgtgctcagcaagatgctgggccaatcgtggaaagcg
ctgagcgccagcgacaagcgtcccttcgtggaagaggcagagcgactgcgaatccagcat
ctccaggatcaccccaactacaaataccgcccaaggagaaagaagcaagccaagaaaatc
aagaggatggaacccaatatcctcctgcataacctttcccagccttgcagtgacaacttc
agcatgagtcaccatggtggcagccagccgggccacccccagcctcccccacttaaccac
ttcagagaactccactccatggggtcggatattgaaaactatggcttgccaactcctgag
atgtctcccttggatgtcttggaacagaccgagccggcgtttttccctccgcacatgcag
gatgactgcaacatgatgccctttcgcggctaccaccaccatcatcagatggagtttccc
caggagaagtgcatggggcgggacgtggccgtgccctacacgcagaccccctcacacttg
gccgacgccatgaggactccccatccctccagcctttactacaaccagatgtgctcagga
actcagaacgggctttcagcccacctgggccagctgtctcccccgcctgaagcccaccac
atggagagcgtggatcacttgaaccaaaccgagctctggacagatgttgaccgcaacgag
tttgaccagtatttgaacatgagcaggactcgtcccgaagcctcgggcctcccttaccat
gtctccctgtccaaagtgactcctagaagcatctcctgcgaggagagcagtttgatatcc
gccctgtccgatgccagcagtgctgtttactatagcccctgcatcaccggttag
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