Pseudopodoces humilis (Tibetan ground-tit): 102110112
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Entry
102110112 CDS
T02921
Symbol
PAPD7
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD7 isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102110112 (PAPD7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102110112 (PAPD7)
03016 Transfer RNA biogenesis [BR:
phi03016
]
102110112 (PAPD7)
Enzymes [BR:
phi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
102110112 (PAPD7)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
102110112 (PAPD7)
Transfer RNA biogenesis [BR:
phi03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
102110112 (PAPD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
102110112
NCBI-ProteinID:
XP_005533564
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MDPRVAWIQPEQKGPANALWMQIWETSQGVGGRGGASFPHYLCLNSPALDSAASPLQGHG
CVRIGAPGACCSSSSPPSPSPSPPALLTGLVPTVPGGPVAVNGGGEGGRRLQKSPSVSSS
SSCSSVESGTESPGFSSSGSCSGGGGSSSSSGGPRAVAVAPPGLLGSGAGPEEFFNFHEN
KVNAVNGHQQPPHPPPASPQQHQYHPGRRKRENKASTYGMNYLLSGSRGVAVINSPHQQG
QPPQPALQSPGTPWKTRKYSPGVQGLHEEIIDFYDFMSPRPEEAAMRREVVKRIETVIKD
LWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLEQALRKHNVAEPYSIKVLDK
ATVPIIKLTDQETEVKVDISFNVETGVKAARFIKEYMKKYSLLPYLILVLKQFLLQRDLN
EVFTGGISSYSLILMAISFLQLHPRIDARRADENLGMLLIEFFELYGRNFNYLKTGIRIK
NGGAYIAKEEIMKVMTNGYRPSMLCIEDPLLPGNDVGRSSYGAMQVKQVFDYAYIVLSHA
VSPLARSYPNRDSESTLGRIIKVTQEVIDYRAWIKKKWGSKINLSPELDNRLKIRDPIAL
CSGDQQQNRDSDPSYSQHLPLSLASTQQLSGSSASSVSSLSSSDIESDTPPCTAPNVYQF
SLQAPTQLMASLAPALPLPSGKPQSAPPRTLIMAASNQQHSGMKFSMKGTHNQGNSYSPI
SSGGMRQPVGNRGHHQYNRNIWRRKKHRDSLPISLSR
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggatccccgcgtggcttggatccagcccgagcagaaaggacccgcgaatgcgctgtgg
atgcagatctgggagacctcgcagggtgtggggggccggggcggcgccagcttcccgcac
tacctctgcctcaactccccggcgctggactctgctgcctctccgcttcaggggcacggc
tgcgtacggatcggggcgcctggcgcctgctgctcctcttcctcgccgccttcgccttcg
ccttccccgccagccctgctgactggactggtgcccacagtccccggtggccccgtggcg
gtgaacggtggcggcgagggagggcggcggctgcagaagtcgccttccgtgtcttcctcc
tcgtcctgctcgtcggtggagtccggtactgagagccccggcttctcctcctcgggatcg
tgcagcggaggcggcggctcctcctcttcctccggcggcccccgggcggtggcggtggct
cctcccgggctgctgggcagcggggccggacccgaggagtttttcaacttccacgagaac
aaagtgaacgctgtgaatgggcaccagcagccgccgcacccgcctccggcgtctcctcag
cagcaccagtaccacccgggccgccggaaacgggagaataaagccagcacctatgggatg
aattacctgctctccggcagccgcggcgtcgctgtcatcaactccccccaccagcagggg
cagccgcctcagccagcgctgcagagccccggcaccccctggaagaccaggaaatacagc
ccgggcgtgcagggactacatgaagaaatcattgacttctatgacttcatgtcccctcgt
cctgaagaagcagctatgagaagagaagtggtaaaaaggatagaaacagtcatcaaagat
ctttggcctaccgctgatgtccagatttttggcagctttagtacagggctttatcttcca
actagtgatattgatctagttgtttttgggaaatgggaacgacctcctttacagcttttg
gagcaagcactgagaaaacacaatgtggctgagccatattccattaaagtacttgacaaa
gctacggtaccaataataaaactcactgaccaggagacagaagtgaaagttgacatcagt
tttaatgtagaaactggtgtgaaggcagctcgatttatcaaggaatacatgaagaaatat
tctttgctaccttacttaattttagtactaaaacagttcctccttcagagggatttgaat
gaagtttttactggtggaattagctcttacagcctaattttaatggcaattagtttcctg
cagctacatccaagaattgatgcaagaagagctgatgaaaaccttggaatgcttctaata
gaattttttgaactctatggaaggaattttaactacttgaaaactggtattagaataaaa
aatggaggtgcctatattgccaaagaagaaatcatgaaagtcatgactaatggatacaga
ccatctatgctatgtattgaagatcctctcctgcctggaaacgacgttggcagaagttct
tacggtgccatgcaagtgaaacaagtttttgattatgcctacattgttcttagccatgca
gtatcaccacttgcaagatcatatccaaatagagactctgagagcacattaggtagaatc
atcaaagtgacccaagaagtgattgactacagggcctggattaaaaagaagtgggggagc
aaaattaatttatcacctgaacttgataataggttgaaaataagagacccaatagctctc
tgcagtggagaccagcaacagaacagagattctgatccatcttacagtcaacacttgccg
ttatcattggccagtacacaacagttatctggttcttctgcctcttctgtgtcatcgctc
tccagcagtgacattgaatcagatacaccaccttgcacagctcctaatgtttaccagttc
agtcttcaagcaccgactcagcttatggccagtttagcacccgcattgcccctgccaagt
ggtaaaccccaatctgcgcctccgagaaccctgataatggctgccagtaatcagcagcac
agtggaatgaagttttccatgaaaggaactcataaccaaggcaacagctacagccccatc
agcagtggaggcatgaggcaaccagttggtaaccggggacaccaccagtacaatcgtaat
atatggagaaggaaaaaacacagagacagcttgcctattagtttgagcagataa
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integrated database retrieval system
