Pseudopodoces humilis (Tibetan ground-tit): 102110441
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Entry
102110441 CDS
T02921
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102110441 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phi03041
]
102110441 (PRPF40A)
Spliceosome [BR:
phi03041
]
Complex A
U1 snRNP components
U1 related factors
102110441 (PRPF40A)
Complex B
102110441 (PRPF40A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
CEP164_N
WW_2
Motif
Other DBs
NCBI-GeneID:
102110441
NCBI-ProteinID:
XP_005519633
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MRPGGVDRGSLMMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMP
GMMQSVMPGMMMSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVSTVQQSSTTTS
SASEDHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSD
SGKPYYYNSQTKESRWAKPKELEDLEAMIKAEENSTKPEDAAAASAPAAAADAPSGAGAV
PAAESAAAAATGAAPEGESAPAAAAGDADGTGTAAAEEQAPGSAAPGAQDGSADTAAAHT
EEAAKQDGSGDAAAKKEDEETQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMK
MIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTST
TRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDN
MANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSL
LRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPAISSDIRFTSMLGQPGSTALDL
FKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLA
FNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPAF
EDITLESERKRIFKDFLHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDDSH
SKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDVEREKDKKERE
RDSEKERARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccggcggcgtcgaccgcggctccctcatgatgggacaccctggaatgccgcac
tacccccccatggggatgcaccccatgggacagagaccccccaacatgcccccagttccc
cacgggatgatgcctcagatgatgccccccatgggaggacccccaatggggcagatgcct
ggaatgatgcagtcggtgatgcctggaatgatgatgtcccacatgtcccaggctgccatg
cagcccacggttcctccaggagtgaacagcatggacgcccaagtaggtgtgacccctcct
ggaactcagacgacgcatcccgtggtctccacagtccagcaaagctccaccaccaccagc
tctgccagcgaggaccactccaagcagaaatccacgtggacggagcacaaatccccggat
ggaagaacttattactacaacactgagaccaagcagtccacgtgggagaaaccagatgac
ctcaaaacccctgctgagcaattgttatccaagtgtccctggaaggaatataaatcagat
tctgggaagccttattattacaattcccaaacaaaggaatcccgctgggcaaaacccaaa
gagctggaggatcttgaagcaatgattaaagctgaagaaaacagcacgaagccggaggac
gctgccgccgcctcagctccggccgcagccgcggacgccccgagcggggccggcgccgtc
ccggccgccgagagcgccgcggccgctgccacgggagccgctcctgagggggaatcggct
ccggccgccgccgcgggggacgcggacgggaccggcacagccgcggccgaggagcaggcc
ccgggcagcgccgctcccggagcgcaggacggcagcgccgacaccgccgcggcccacacg
gaggaggcggccaagcaggacggatcgggagatgctgctgcaaagaaggaggatgaggag
acccaaccagttaaaaaaacctacacgtggaacacaaaggaagaggccaaacaagcattt
aaagaactgttaaaagaaaagcgggttccatccaatgcttcctgggagcaagccatgaaa
atgatcatcaatgaccccagatacagtgctttggcaaaactgagtgagaaaaagcaagcc
tttaatgcctacaaagttcagacagagaaggaggagaaggaagaagccagatccaagtac
aaggaagccaaggaatccttccagcgcttcctggaaaaccacgagaagatgacatccacc
accagatacaagaaagctgaacaaatgtttggggagatggaagtgtggaacgccatatcc
gagcgggaccggctggagatttatgaggatgttttgttcttcctgtccaagaaggagaag
gaacaagccaagcagctgcggaagaggaactgggaagctctgaagaacattctggataac
atggccaacgtcacctactgcaccacctggtcagaggcgcagcagtacctcatggacaac
cccaccttcgccgaggatgaggagctccagaacatggataaggaggacgccctgatctgt
ttcgaggaacatatcagagccctggagaaagaggaggaggaagagaagcagaaaagtttg
ctgagggaaaggaggaggcagcgtaaaaacagggaatctttccagctgtttctggacgag
ctgcacgagcacgggcagttacattccatgtcctcctggatggaattgtacccggccatc
agctccgacatccgcttcaccagcatgctcggccagcctggatcaacagcgctggacctg
ttcaagttctacgtggaggatttaaaagctcgttaccacgatgagaaaaagataattaaa
gacatcttaaaggataaaggatttgtggtggaagtgaacacttccttcgaggattttgtc
accgtcatcagctccactaaaagagccaccacgttggatgcagggaatatcaaactggct
ttcaacagtctgctggagaaggcggaagcgcgggaacgggagcgggaaaaggaggaagca
cggaagatgaagaggaaggaatcggccttcaagagcatgttgaaacaagccacccccccc
atcgagctggatgctgtctgggaggatatccgagacaggtttgtgaaggagccggcattt
gaagacatcaccctggaatctgaaaggaaaaggatatttaaggatttccttcatgtcctt
gagcacgagtgtcaacaccaccactccaagaccaagaaacattcgaagaaatccaaaaaa
catcaccggaagcgctcccgttcccgctccggctcagagtccgaggatgacgacagccac
tccaagaagaagcggcagcgctcggaatcgcggtcggtgtcggagcgttcttccagcgcc
gagtccgagaggagttacaagaagtccaaaaaacacaagaagaagagcaagaagaggagg
cacaagtctgattcaccagaatctgacgtggaacgagagaaggacaagaaagaaagagag
agggatagcgagaaggaaagagccagacagagatccgagtccaagcataaatctcccact
aaaaaacggcctggaaaagattccggaaactgggatacctctggcagcgagctcagtgag
ggggagctggaaaaacagaggaggactcttttggaacagctggatgaagatcagtga
DBGET
integrated database retrieval system
