Pseudopodoces humilis (Tibetan ground-tit): 102110486
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Entry
102110486 CDS
T02921
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phi04515
]
102110486
Cell adhesion molecules [BR:
phi04515
]
Cadherins
Protocadherins
102110486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
102110486
NCBI-ProteinID:
XP_014117941
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MACERRSGDRKRQVILFILCVCVCQSGAETLRYSLPEEMERDSFVANIAKDLGVPLSQLA
ARKARVVSEGNEQLFRLNQNTGVLTAKESLDREEICPQSDICTLVFKIFFENPLQLIRGE
VEIRDVNDNSPVFPEKEMVLKILETAAPGSRFPLESAQDKDVGINGLQNYSLGPNPHFSL
ATGTAKDGVKYLELVLQRQLDREEQGELNLLLTATDGGSPPRSGTAQVRIVVLDANDNIP
VFERETYEVRLAENSPVEQLVVRVAATDPDEGSNGKVRYAFTQTSERARQLFQLNPSTGE
IRVAGKLDFEEAKSHKMVVKATDGGGLSAHCKVQVEVLDVNDNAPEIALTSLTTTIPEDA
PPRTVVALFSVRDRDSGDNGRTECSIDGDLPFSLTPTFDNYYELRTNAALDRERTAEYNI
TITATDWGRKRLSSQESIFVQISDVNDNPPEFTQEVYTMSVTENNSPMLRIGSVKATDAD
AGKNARVNYALVLQEGKEQPDVSVNTENGDVYILRPLDYEKVPSFEVTVSAADGGSPPLS
TQAVLRVVVRDENDRQHFALERGSGRLLVAGRLDREELCGQSATCMLPFELLLSKPLQFF
RVEVALEDINDHSPIFRGDRVRFRIPETSNPGSRFPLEVARDLDIGSNTVQTYSISPENE
YFSVSYGSRSNGDKYVELVLEKPLDREEKAEMSFSLIAVDGGSPPRSGTIEISVVIMDVN
DNAPTFKQDHYIVKVLENMTEGSVFLQLLATDQDAGIYGEISYQLSEAADESVSIFVIDP
LSGEIRFTKPLDFEAAQRHELSVTATDGGGLSAICKVLVEVVDVNDNAPEVMVSSFSSPL
PENTAPGTVVALFTVRDRDSGANGKISCGLEDQLFFSLRPAYKNYYELVTVSALDREETA
RYILRVTAADAGSPPLTSTQTFTVDISDVNDNAPVFNQTSYTMYVRENNVPTVFVGAVSA
ADADVGLNGKVSYSLAAVQAAEGPWCSCVSVNSENGHVFVLRPLDYERLRQTEVTVSASD
AGSPPLRANVSVRLVVLDENDNAPVVLYPGQDSSPASSELVPVSAEAGYLITKVVAVDAD
SGQNSWLSYHLLRASEPGLFTVGVHSGEVRLRRPVTERDSVRQKLLVLVRDNGKPPLSAT
AAVSALLLKDLSDVRLPGHGSPAPEDQAGSLTTYLIIALVCVSLLFLVSTALFVAHKVCK
RKELKAGHVLYGADNLQSGLADGAAAGSLPRAYCYEISLTTGSGNSEFKFLKPILPSVPA
QHCSVGQGPEDEQHFPCVPVSTDDTVPDNPGTLSAGHFNSLSFN
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtgagagacggagcggagacagaaagaggcaagtgatcttgtttattctgtgt
gtttgcgtatgtcagagcggggctgaaaccctccgctactccctgccggaggaaatggag
agggactcctttgtcgccaatattgcaaaggacctgggggttcctctgagccagcttgct
gctcgcaaggcccgcgttgtgtccgaggggaacgagcagcttttccgactcaatcaaaac
accggagtcctgacggcaaaggaatcgctggaccgagaggagatctgtccacagagcgat
atctgcacgctcgtctttaagatattctttgaaaatccattgcagcttatccgaggggag
gtggaaattcgtgacgtaaatgacaactcgcccgtgttcccggagaaggagatggtttta
aaaattctagaaacagcagctcctgggtcccgtttccccctggaaagcgcccaggacaag
gacgtgggcattaatggtttgcaaaactacagcctcgggcccaatcctcatttctccctc
gctactggaacagcgaaagacggagtaaaatacctggaacttgtcctacagcgccagctc
gatcgtgaagagcagggagaactgaatttacttctcaccgccaccgacgggggatcacca
cccaggtcgggcacggctcaggtccggatcgtggtgctggatgccaatgacaacatcccg
gtcttcgaaagggagacctacgaggtgcgcctggctgagaacagccccgtggagcagctg
gtggtcagagtcgctgccacggaccccgatgaagggtccaacgggaaagtgcgctatgcc
ttcacccagacatcggagcgagcccggcagctcttccagctgaacccaagcaccggtgaa
atacgagtcgcgggcaagctggattttgaggaagcaaaatcccacaagatggtggtgaaa
gccacggacggcggggggttatctgcgcattgtaaagtgcaggtggaggtcctggacgtg
aatgacaacgctccggagatagcgctcacctccctcaccaccaccattcccgaggacgcc
ccgccacgcaccgtggtggctctgttcagtgtgagggaccgggactccggcgacaacggc
aggacggagtgttccatcgacggggacttgccgttcagtctcacccccacatttgataat
tactacgaactgagaacaaacgcggctctggacagggagaggacggcggaatataacatc
accatcacagccacggactggggcagaaagaggctgagctctcaggaaagcatcttcgtg
cagatatcggatgtgaacgacaaccccccagagtttacccaggaggtttacaccatgtct
gtcacggagaacaacagccccatgctccggatcggcagcgtgaaggccacggacgccgat
gcaggaaaaaacgcccgtgtgaactacgcactggtgctgcaggagggcaaagagcagccc
gatgtgtccgtcaacactgaaaacggggatgtttatatcctccgcccgctggactacgag
aaggtcccctccttcgaggtgacagtgagcgccgccgatggtggctccccgccgctcagc
acccaggccgtgcttcgcgtggtcgtgcgggacgagaacgacaggcagcattttgcctta
gagcgcggctccggccgcctgctcgtggcggggaggctggaccgggaggagctgtgcggc
cagtccgccacctgcatgctcccctttgagctgctgctctccaaacccctgcagttcttt
cgggtcgaggtagccttggaggatatcaatgaccattcgcctattttccgcggagatcga
gtaagatttaggatccctgaaacgagcaaccctggttcacgtttcccgttggaggtggct
cgagacctcgatattggcagcaacacagtccagacgtacagcatatctcccgagaacgaa
tatttcagtgtctcctatggaagtcggagtaatggagacaaatatgttgaacttgttttg
gagaagccactagacagagaggagaaggcagagatgagtttcagtctcattgctgtagat
gggggctctcctcccagaagtggcaccatcgagatctctgtggtcattatggatgtaaat
gacaatgctcccacattcaaacaggaccattacattgtgaaggttttggagaacatgaca
gaagggtctgtgtttctgcaactgctggcaacagatcaggatgcaggaatttatggggaa
atttcctaccaactcagtgaagctgcagacgagagtgtctcaatatttgtgattgacccc
ctaagtggtgaaattagattcacaaaacctctggactttgaggcagcacaacgtcacgag
ctgagtgtgacagctacagatggagggggactctcagccatctgcaaagtgctggtggag
gtggtggatgtgaatgacaatgccccagaggtgatggtcagctccttcagcagtcccctc
cccgagaacacagcgcccggcacggtggttgccctgtttacggtcagggaccgggattct
ggggccaacgggaagatctcgtgtggcctcgaggatcagctcttcttctcgctgcggcca
gcctataagaattactatgagctggtgacagtgagcgcgctggaccgcgaagagacggct
cgctacatcctcagggtgacggcagcagacgcggggtcgcctcctctgacgagcacgcag
accttcaccgtggacatctcggatgtcaatgacaacgcccccgtcttcaaccagacgtcg
tacaccatgtacgtgcgtgagaacaatgtgcccacagtgtttgttggagccgtcagcgct
gccgacgctgacgtggggctcaatggcaaggtgagctattccctggcagcggtgcaagcg
gcagaggggccttggtgctcgtgcgtgtctgtgaactctgagaacgggcacgtgtttgtg
ctgcggcccctggactacgagcgcttgaggcagacggaggtgacggtcagtgcctctgac
gcgggctctcctcccctcagagccaacgtcagcgtccgcctcgtggtgctggacgagaac
gacaacgccccggtcgtgctgtacccaggccaggacagcagcccagcgtccagtgagctg
gtgcccgtgtcggccgaggcgggctacctcatcaccaaagtagtggccgtggatgccgac
tccgggcagaactcgtggctctcgtaccacctgctgagggccagcgagccagggctgttc
acggtgggtgtccacagcggggaggtgcgtctgaggaggccggtgacggagagagacagc
gtgaggcagaagctccttgtcctggtcagagacaacggcaagccgcccctgtcggccacg
gcagctgtgagcgcgctcctgctcaaggacttgtcagacgtgcgcctccccgggcacggc
agcccggccccagaggatcaggctggctccctgaccacctatttaatcattgccctggtg
tgtgtctccctgctcttcctcgtctccacggcactctttgtggctcacaaggtgtgcaag
agaaaggagctgaaggctggccatgtgctttatggtgccgacaacttgcagagcggcctg
gccgatggggccgctgcagggagcctgccccgcgcctattgctatgagatcagcctcaca
acgggctcgggcaacagcgagttcaaattcctcaagcccatcctccccagcgtgccagca
cagcactgctccgtgggccagggcccggaggatgagcagcatttcccctgtgtccctgtc
agcaccgacgacacggtaccagacaatcctggcactctctctgcaggacacttcaattct
ctttccttcaattag
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