Pseudopodoces humilis (Tibetan ground-tit): 102110517
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Entry
102110517 CDS
T02921
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102110517 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102110517 (DHX36)
03012 Translation factors [BR:
phi03012
]
102110517 (DHX36)
Enzymes [BR:
phi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102110517 (DHX36)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102110517 (DHX36)
Translation factors [BR:
phi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102110517 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
Sir1
NPHP3_N
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
102110517
NCBI-ProteinID:
XP_005525199
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MSYEQRRDWGRGRGRGRGGDGCSASAASSSAGGPGGRGRHPGHLKGREIGLWYARKQGQK
SRDADRQQRAVVRMDERREEQIVQLLNSVQTKNDKEQEAMSWWSGDEEGPAPEQPAKVKP
HAVKAPVRQRPAWEKTSLDLDVEYLCEKTEQDADLDEQLKEDLMKKRSDPRYIEMQRFRE
KLPSYGMREELVKLINNNRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVCTQPR
RISAISVAERVAAERAEGCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHL
SSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDHCPMIH
IPGFTFPVVEYLLEDVIEKLRYTPEKMDRRTHWRKGFMQGHVSRPEKEEKEEIYRQQWPG
YLRQLQGRYSASTIDALEMMDDDKVDLDLVAALIRHIVLEEEDGAILVFLPGWDNISTLH
EILMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTLPGVRKIVIATNIAETSITIDDVVF
VIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDD
YQLPEILRTPLEELCLQIKILKLGGIANFLSKLMDPPSRDAVMLAINHLMELNALDRQEE
LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR
KELSKNSKSDHLTVVNAFTGWEEARSCGFRNEKDYCWEYFLSSNTMQMLHNMKGQFAEHL
LAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDG
SVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQ
DTIAVDEWIVFQSPEKIANLVKKLRQELDDLLQEKIENPHPVDWNDIKCRDTAVLTAIID
LITTQENEGVRNFAPRFQGERYS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccgcgactggggccgcggccgcggccggggtcggggcggcgat
ggctgctctgcctccgccgcctcctcctcggcgggcgggcccggcgggcggggacggcac
cccgggcacctgaagggccgcgagatcgggctgtggtacgcccgcaagcagggccagaag
agccgggacgccgaccggcagcagagagctgtcgtgcgtatggacgagcgcagggaagag
caaatcgtgcagctgctgaattctgtccagactaaaaacgacaaagagcaagaagccatg
tcctggtggtccggggatgaagaaggccctgctccagaacagcctgccaaagtgaaacca
catgctgtaaaagctcctgtgagacagagaccagcctgggaaaaaacatccctggatctg
gatgtggaatatctctgtgaaaaaaccgagcaggatgctgatttagatgagcaacttaaa
gaagacttaatgaagaagagatctgatcccagatatattgaaatgcagaggttcagagag
aagctcccctcatacgggatgagagaggagctggtgaagctgatcaacaacaaccgcgtg
acggtgatcagcggtgagacgggctgcgggaaaaccacgcaggtgacccagttcatcctg
gatgatcacatcgagcgtggcctgggctccacctgcaggatcgtgtgcacccagccccgc
aggatcagcgccatctccgtggcagagagagtggctgctgagagggccgagggctgtggc
aatggcaggagcaccgggtaccagatccgcctgcagagtcggttgccaaggaaacaaggt
tcaattttgtactgtaccacgggaattgtcctgcagtggctccagtcagataagcacttg
tccagcatcagtcatgtagttcttgatgaaatccatgaaagaaatcttcaatcagatgtt
ttaatgagcattattaaagatcttctgaatgttcgactggatctgaaagttatactcatg
agtgctactttaaatgcagagaagttttctgagtactttgaccattgcccaatgattcac
atccctggatttaccttcccagtggtggaatatctgcttgaagatgtcattgagaagttg
aggtacaccccagagaagatggatcgccggacgcactggaggaagggcttcatgcagggc
cacgtgagcaggccagagaaggaggagaaggaggagatctacaggcagcagtggccaggc
tacctaaggcagctgcagggcaggtattcagcaagtacaatcgatgccctggagatgatg
gatgatgacaaggtggacctggaccttgtagcagcactcatcagacacatcgtgctggaa
gaggaggatggtgcaattctggtgtttctgcctggctgggataacatcagcactttgcat
gagatcttgatgtctcaagtcatgtttaagtcagataggtttattatcatacctttgcat
tcactgatgcctactgttaaccagactcaggtgttcaagaagaccctgccaggagtgagg
aaaatcgtgattgcaaccaatattgcagagaccagcatcacaatcgatgacgtggtgttt
gtgatagatggggggaagataaaggagactcactttgacacccagaacaacatcagtacc
atggcagcagagtgggtcagcaaagccaatgccaagcagaggaagggtcgagcaggaaga
gttcagccaggccactgttaccacctgtacaatggactgcgtgccagcctcctggatgat
tatcaactaccagagatcctgaggacacccttggaagagctctgcttacagatcaagatt
ctgaagcttggtggaattgccaattttctgagcaaactgatggaccccccgtctcgtgat
gctgtgatgttggccataaatcacctcatggagctgaatgctctggacaggcaggaggag
ctgactcccctgggtgtccacctggcacggctgcccgtggagccacacatcgggaagatg
atcctgtttggagccttgttctgctgcctggaccctgtgctgaccattgcagccagcctc
agcttcaaggacccttttgtcatccctctgggcaaagagaaaatcgcagatgcaagaaga
aaagagctgtcaaagaactcgaagagcgaccatctgactgtggtgaatgctttcactggc
tgggaagaggctcggagttgtggcttcaggaatgagaaggactattgctgggaatatttc
ctgtcctcaaataccatgcagatgctgcataacatgaaaggacagtttgctgagcatctc
cttgcagctgggtttgtcaatagcagaaaccccaaggatcccaaatctaacaccaactca
ggtaatgagaagctgctcaaagcagtcatctgtgctggcctctatcccaaagtggcaaag
atccggcccagcttcagcaaaaagagaaaaatggtgaaagtttgcaccaagacagatgga
tcagttaatatccatcccaaatcggtgaacgtggaggaaaccgagttccattacaactgg
ctcgtgtaccatttgaagatgaggaccagcagcatttacctgtatgactgtacggaggtg
tctccatactgcctcttgttctttggaggggatatatccattcagaaggataaggaccag
gacaccatcgctgtggatgagtggattgttttccagtctccagaaaaaatagcaaacttg
gtcaagaaattgagacaagaacttgatgatcttctacaagaaaaaatagaaaacccccat
cccgtggactggaatgatattaaatgcagggatacagcagtgctgacagctattatagac
ttaatcaccacgcaggagaacgagggcgtcaggaacttcgcaccgcggttccagggcgag
cgctacagctga
DBGET
integrated database retrieval system
