Pseudopodoces humilis (Tibetan ground-tit): 102110622
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Entry
102110622 CDS
T02921
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phi04040
]
102110622 (TRPA1)
Ion channels [BR:
phi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102110622 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102110622
NCBI-ProteinID:
XP_005517154
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MKRSLLRLCRAREKAAAASAYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIDDSSCEVLNVMDSSGNTPLHWATKKNQVESVR
LLLSRGANPNILNSNMMAPLHMAVQSLHNEIVKILVQHSSTDVNLEGEAGNTPIIVACYK
DNPEALTLLIENGGKICKPNKTGCMPIHAAAFSGAKTCLEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGEESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKYLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAREGHAKAVRLLLDYGAKILFNKAVASFFHEAIHNRRKDV
VSAVILHKRWEEAVVTFSHYSSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNRKVKDGEEIFYEPLTTLNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTELYEARPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTYAQSPDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKTNVPNPSTEKNSFF
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgctgcggctctgccgggcgcgggagaaggcggccgcggccagcgcc
taccagggcgtcgtgtgcgaggcggatgccgcctccgtcgcctcgcaggatgtcttcaag
gttatttcagatggaagtgcctgcaggctacggagcttcattaagaagaatcgttctggg
cttaccaaagtggatgaattaaatgccaccccactgcatcatgctgcagaaggaggacaa
atagagctaatgcagttgatcattgatgattcttcctgtgaagtattaaatgtgatggat
tcttctggaaataccccactgcactgggccacaaagaaaaaccaggttgaaagtgttcgt
ttgcttctcagcagaggagccaatccaaacattctcaactccaatatgatggcacctttg
catatggctgttcagtccctgcacaatgaaattgtgaagattttagtccaacatagcagt
acagatgttaacttggaaggtgaagcagggaacacacctatcattgtagcatgttacaag
gacaatcctgaagcactgacactcctgattgaaaatggaggaaaaatatgtaaaccaaac
aaaacaggatgtatgcctatccatgcagcggcattttcaggtgcaaaaacatgtctggaa
attcttttgaaaaaaggtgaagaactgggtcactctgctaaaacccacatcaattttacc
aataatgggaagtgcagtccacttcatttggcagttcagagtggcgacctcgaaatgatt
aaaatgtgcattgaatttggagcccagattgatctaaaacagaacgaaaaatgcacagca
cttcattttgctgccactcaaggagcaacagagattgtaaagctaatgatgtcatcctat
gctggtgaggaatccattattgatgctgtagatgggaataaggaaacattgcttcacaga
acagcattgtttgatcattatgaactggcggagtatttgatttcaatgggggctaatatt
gatagtgttgacatagaaggtcgatccccacttctgctggccacttcctgcgcatcatgg
aaaattgtgaatttactgctttccaaaggagcaaatgtatcattaaaagatcatcttggt
cggaatttcttgcatttgaccgtattgcagcctggaggattacagcatctgaatgaaaaa
tatctgcagatggaacatattaaaaatcttgttgtggatgaagataatgaaggatgcact
ccattgcattatgcatgcaggcaaggtgtggccctctctgtaaataatttactcagcctc
aacgtttccatctactctaagagcagggacaagaagtcaccattgcactttgctgccagc
tatgggcgcatcaatacttgtcaacgacttataagagatatgaaagacacaagacttctg
aatgaaggtgataagaagggaatgactccccttcacttggcagcccagaatggtcatgag
aaggtagttcagtttcttctgaagaggggggccctctttctctgtgattataaaggctgg
acagccctgcaccatgctgccttcggaggatacactcgcacaatgcagatcattttggat
actaatgtgaagtgcactgacagagtggatgaagaagggaacacagctttgcacttggct
gcacgagaaggacatgcaaaagcagtgaggttacttcttgactacggtgcgaaaattctg
ttcaacaaagcagtagcttcttttttccatgaagcaatacacaataggagaaaagatgtg
gtgtctgctgtcattctgcacaaaagatgggaagaagctgttgtgacgttctctcactat
tccagtgccaataagtgtcctttgctggaaatggttgagtatcttcctgattcatttaaa
ctggtgttggacaactgcataattgagtcttcagaggaaaagacaagtcgagacttctat
attgaatataacttcagatatcttcagtgtcccttgacacttaacaggaaagtaaaggat
ggtgaagaaattttctatgaaccacttaccactctaaatgccatggtacgccacaatcgc
atggagctactaagtcatcctgtgtgtaaagaatatttgcttatgaaatggatggcctat
gggtttcgtgcacacctaatgaatttaggcatatattctcttggtctcatcccactgact
cttctggtcactcacatacaaccaggaagacctttgaatggaacagagctctatgaagcc
agaccattagaatatgaggattcatacttcacaagggtgtgtatgtgtttagttttaatt
atgagtttgctgggcatctgcaaagaaatatttcagctgattcagcagaaattgaaatat
ttgttggattactccaatctcctggactggaccatttatactacaagcataatttttgtg
tcttctttatttattaatacaccagctcatttgcagtgggaatgtggagcaattgctgta
tatttgtcttggatgaacttccttctttatcttcaacgatttgagaactatggaatctat
gttgtgatgttctgggaaattttgaggactttgattcggattgctgtggttttctttttc
ctgatactggcttttgggctgagtttctttgtccttttgggttcacagcaaacatacagc
acacctctgctttctgtaatgaagacatttgcaatgatgctgggagacattaattaccat
gatgcattccttgatcctttactaagcagtgaattgccatatccattcctgagttacaca
gtcctcattatattcaccttgcttattccaatcctgcttatgaacttgctaattggtttg
gctgttggtgatatcgctgaagtacagaaatatgctgcactcaaaaggattgcaatgcag
gttaaccttcacaccaacttagagaagaagctgccattttggttcttaagtcgggtggac
caggaatcaatcactgtatatcccaacaggccaagatactgtggatttatgagtgtgttc
caatattgctttgggtgtgaagactctaccacgtatgcacagagccctgatacaacactg
gaactggaagttctgaagcagaaatacaggctcaaagatatatcaacattgttggaaaag
caacatgacctcattaaactgattatccaaaaaatggagatcgtgtcagaggctgaggat
gaagacagcaatgatttatttcagcacaaatttaggaaaaggcagctagagcacaaaaat
agtaaatgggatacagtgttaaaagctgttaaaacaaatgtgcctaacccaagcacagaa
aagaacagcttcttctag
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