Pseudopodoces humilis (Tibetan ground-tit): 102110850
Help
Entry
102110850 CDS
T02921
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102110850 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102110850 (WDR33)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102110850 (WDR33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Collagen
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
102110850
NCBI-ProteinID:
XP_005529682
LinkDB
All DBs
Position
Unknown
AA seq
1315 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKS
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQIGPQGPLHQGAGGPQGFMGPQGPP
GPQGPPQGMPRPQDLHGHQGIQRHPGPHGPMGPPGPQGNAGPQGHLGPQGLPGSQTHLGP
QGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLN
PRGMQGPPGPRDNQGPNPQGMMMGHPQEMRGPHIQSGLLGHGPQEMRGLQGPPPQGSMLG
PQEMRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLGD
GPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDARGPPNHHLGPLSDRR
HEQNSSGPEHGPERGLFRGGQDWSDGRDRRGPHPDFHDDFDRPDDFRDDFHTDKRFGHRL
REFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDDRYPRDPE
DARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDAFDSPDENSRGRDHGARGR
GRGALRGARKGLLPTPDEFPRFEGGRKPESWDGNREPGPRPDHPPHDGHSPANRERSSSL
QGMDMASLPPRKRPWHDGPGTSDHRDMDAPGGPPEERGKGRGNSGPSQRAPKSGRSSSLD
GDHHDGFHRDEAFGGGPGGVSNAPRGGRSGSNWGRGNNMNSGQSRRGGSRGGRGR
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaattggctccccgccccggttcttccacatgccgcggttccagcaccag
gcgccgcggcagctcttctacaaaaggcctgacttcgcccagcagcaggccatgcagcag
ctcacctttgatgggaagcgcatgagaaaagctgtcaacagaaagaccatagactacaat
ccttctgtaatcaaatatttggagaatagagtatggcagagagaccaacgagatatgcga
gcgatccagcccgatgcaggatattataatgatttggtccctcctataggaatgctgaac
aaccctatgaatgctgtgacaacaaaatttgttcggacatctactaataaagtaaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggggagttcactttatggaatggactgactttcaattttgaaacaatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggccatggagcagatgtgaaatgtgttgactggcatccaacaaagggcttagttgtt
tcaggaagtaaagatagccaacagcccatcaagttctgggatccaaagactggccagagt
cttgccacactacatgctcacaaaaacacagtgatggaggtgaaactgaatctcaatggc
aactggctgctgacagcttctcgtgaccacctctgtaagctctttgacatccggaacctg
aaagaagaacttcaggtcttcaggggtcataagaaggaagccacagctgtggcctggcat
cctgttcacgaagggctgtttgccagtggagggtctgatgggtccttgttgttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccatgaaggaatgatctggagt
ctagcatggcatcccctcggacacattctatgttcaggctcaaatgatcacaccagcaag
ttttggactagaaatcggcctggagataaaatgcgagatcgttacaacttgaacctgctg
cctgggatgtcagaggatggtgtggaatatgctccaggagatgatctggagcccaacagt
ctggcagttattcctgggatgggaatacctgaacagttgaaaatagccatggagcaggag
cagatggggaaagatgagtccaatgacattgaaatgacaatcccaggactggactgggga
atggaggaagtaatgcaaaaggaccaaaagaaagtgccacagaaaaaagttccctatgca
aaaccaataccagcacagtttcagcaggcatggatgcaaaataaagttcctttgcctccc
ccacctgagccattgaatgatagaaaggaggatattaaactggaggagaaaaagaaatca
caggcagagattgagcaagaaatggcagcacttcagtacacaaacccacaactcctggag
caactgaagattgagagacttgcacaaaagcaagctgagcaagtgcagccaccaccccca
ggaggatctcttcatggacctcagcctttcccagggcaaggcccaatgtcacagatgcct
caagggtttcagcagccccttccacctcagcagatgccaatgaatatgccacagatggga
cctcctggtccacaaggacagttcagacctccaggaccccaaggacaaataggacctcaa
ggtccgttacaccaaggagctggaggtccacaagggttcatgggaccacaaggacctcca
ggcccccaagggcctccacaaggaatgccacggcctcaggatttacacggacatcaagga
atacagagacatccaggccctcatgggccaatggggcccccaggtccacagggtaatgct
ggcccacagggacacctgggaccacagggcctgcctgggtctcagactcatttaggacca
cagggcccacctggcccacaaggtcacttgggtcctcagggtccccctggaggtcaaggg
atgcaggggccacctggtccacgaggaatgcaaggacctcttccccacggcatgcaagga
gctccgggatctcaagggatgcagggccctatatcccaagggcctttgatgggacttaat
cctagaggaatgcagggtccaccaggacccagagataaccagggacctaatccacagggg
atgatgatgggtcatccacaagaaatgagaggtcctcatatacaaagtggtttactagga
catggtccccaggagatgcggggccttcaggggcccccacctcaaggttcaatgctggga
ccacaagaaatgcgtgggccacctggtccccagggccagcagggacctccacaaggctct
ttggtggggcctcaaggaaacatgcaaggacctcagggacagccgaacccttcgagaggg
ccacacccttcccagggccctctgcccttccagcagcagaaaacacctctgttgggtgat
gggcctcgtcccccattcaatcaggatggacagaacccgggtcctcctccgctgatacca
ggcctgggacagcaaggaggacaaggtcgtctgggccctcacaaccaaggacctggtctt
aataaaggtgatgcccgtgggccacccaaccatcacctgggcccgttgtcggacagacgg
cacgagcagaacagcagcggccccgagcacgggccagagaggggcctgttccgagggggc
caggactggagtgatggcagggacagacggggacctcaccccgatttccacgatgacttt
gatcgaccagacgacttccgtgacgatttccacacagataagagatttggccatcgatta
cgagagttcgaggggagaggaggcccaccattgcaagatgagaaatggagacgaggtgga
cccgggcctccctttcctcctgatcacagggaatttgaaggaggtggttccaaccgtggg
cctcctggtgcttgggaaggacggagaccttcagatgacagatatccacgggatccggag
gatgcgcgcttccgaggaaggcgagatgagagcttccgaagaggaggaccctcaagacat
gagggccggggacccaggggcagagatggctttcctggccctgaagattttgggccagat
gatgcttttgactctccagatgaaaactccagaggaagggatcatggtgctcgggggcga
ggtcgaggtgctctgagaggagctcggaagggtttgcttcctactccagatgaattccca
cgctttgaaggagggcggaaaccagaatcctgggatggaaacagagaaccaggtcctcgt
ccagatcaccctcctcatgatgggcactctccagccaacagagaacgttcctcttcactc
cagggcatggacatggcctcactgccaccacggaaacgtccctggcatgatggaccagga
acctctgaccacagagacatggatgctccaggtggacctccagaggagaggggcaaagga
cgaggaaattcaggaccttcacagagagctccaaaatctgggaggtccagttctctagat
ggagaccaccatgatggattccacagggatgaagcctttggcggaggccccgggggagtc
agtaacgctcctcgaggaggaaggagcggcagcaattggggaagaggaaataacatgaac
tctggccagtcccggagaggaggatctcggggcggacggggccgatag
DBGET
integrated database retrieval system
