Pseudopodoces humilis (Tibetan ground-tit): 102111662
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Entry
102111662 CDS
T02921
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102111662 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102111662 (HERC4)
Enzymes [BR:
phi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102111662 (HERC4)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
HECT type E3
102111662 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RLD
RCC1
HECT
RCC1_2
Alsin_RLD
Motif
Other DBs
NCBI-GeneID:
102111662
NCBI-ProteinID:
XP_005530552
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPG
TEECVRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS
PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR
SQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQIT
CGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGSWIPYSTQCPMSTDSEE
CYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRNPDLWKQIWTVNETFIQRLLSFPSGRLPV
EIANEIDGTFSSAGCLNGSFLALSNDDHYKTSTRFSGVDMNAARLLFHKLIQPEHTHISQ
QVAASLEKNLIPKLTSSLPDVEALRLYLTLPECPLMSDENNFTTLAIPFGAAILNLEKAP
LKVLENWWSVLEPPLFLKIVELYKDVVVHLLKLCKMGLPPSDRRVLTNFLHTAFRVLEIL
HRVNERGQVIQYDRFYIHEIQDLIDIRNDYANWFQQQVLGMDVNHGLTELTEIPVIICTY
PFVFDAQAKTTLLQTDAIIQMQMAVDQAHRQNLSSLFLPVFESVNPCLILMVRRDNIVGD
AVEVLRKTKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRL
IWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNKKPSLDDLKELMPDV
GRGMQQLLDYPEDDIEEAFCLNFTITVENFGTTEIKELVPKGADIPVVKQNRQDFVDAYV
DYIFNRSVASLYSAFHEGFHKVCGGKVLQLFQPSELQAMVIGNTNYDWKELEKNTEYKGE
YWADHPTIKIFWEVFHELSLEKKKQFLLFLTGSDRIPILGMKCLKLVIQPTGGGEDYLPV
AHTCFNLLDLPKYTDKETLKSKLIQAIDHYEGFSLV
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggcaatgcatcttttggacagcttggattgggtggaattgatgaagag
attgttttagaacccagaaaaagtgactttttcctaaataaaagggtcagagatgtagga
tgcggactgagacatactgtttttgtcctggatgatgggactgtttatacatgtggatgc
aatgatctaggacaactagggcatgaaaaagccaggaaaagacccgaacatgttggtgca
ctggatgcccaaaatattgtagctgtgtcatgtggagaagcccacactcttgcattaaat
gacaaaggtcaggtatatgcttggggtctggctactgatggacagcttggcttgccagga
acagaggaatgcgtcagagtgcccagaaatattaaaagcttatcagagatccagattgtt
caagttgcttgtggttattatcactcgctagcactctcaaaaggaagtgaagtgttttcc
tggggacaaaacaaatatggccagctgggcttaggttatgagtataagaaacaaacctca
ccacaaatgattaaatctctgctgggaatcccttttgcacagattgcagcaggaggagct
cacagttttgtactaactctttctggagccatctttggatggggacgtaacaaatttggg
cagctgggtcttaacgatgataatgacaggtatgttcctactctgctgaagtccctgaga
agtcagaaggttgttcatatatgttgtggagaggatcatactgctgcccttacaaaggaa
ggtggggtttttacatttggagctggaggctatgggcagttgggtcataactctaccagc
catgagataaatccaaggaaagtttttgagcttatgggaagcgttgtcacacaaattacc
tgtggcaggcagcacaccactgcattcgtcccttcctctggaagaatttactcttttgga
ctcggaggcaatggacagttgggtacagggaccaccagtaacaggaaaagtcccttcaca
gtgaaaggaagctggattccctacagtactcagtgcccaatgagcacagacagtgaggag
tgctactgtgttaagagaattttctctggtggcgaccaaagttttgcacactacttttat
ccacagaacatggtaccaccagatgattttaggaatcctgacctttggaagcagatctgg
actgtgaatgaaacgtttattcaaagattgctgagtttcccatctggaagacttcctgta
gagatagctaatgaaattgatggaacattctcctcggctgggtgcctgaacgggagcttt
ttggcattgagcaatgatgatcattacaaaaccagcactagattctcaggggttgatatg
aatgctgctagactactctttcacaaactcatacagcctgagcatactcatatatcacaa
caggtggcagctagtttggaaaagaaccttattcccaaattgaccagctccttaccagat
gttgaagctttgaggctgtatctcactctaccagagtgcccgctgatgagcgatgaaaac
aacttcacaacgttagctattccttttggagcagctattctgaacctagaaaaagctcct
ctcaaagttcttgaaaattggtggtctgtacttgaacctcccttgttcctgaagatagtg
gaactctacaaggatgtcgtagtgcaccttttgaagctgtgcaagatgggccttccacct
tctgacagaagagtgctcaccaatttcctacacacagccttcagagtgctggaaatactg
cacagagtaaatgaaagaggacaagttatacagtatgacagattttacattcatgagata
caagatttgatagatatcagaaatgactatgccaactggttccagcagcaggtattggga
atggatgtcaaccatggattaactgagttaacagaaattcctgttataatttgcacatac
ccatttgtatttgatgcccaggcaaagacaactctcttgcaaacagatgcaatcatacag
atgcagatggctgtcgatcaggcccacaggcagaatttgtcttctctcttcctgccagtc
tttgaatctgtcaatccctgcctgatcctcatggtccggagggacaacatcgtgggcgac
gctgtggaggtgctcaggaaaacaaagaacgtggactacaagaagccactcaaggttatt
tttgtaggggaggaagccgtcgacgcgggaggcgttcgcaaagaattttttttgctcatc
atgagggagttgctagatcccaaatatggaatgttcaggtactacgaggagtccaggctg
atctggttctctgataagacctttgaagacagtgacttgtttcatttgattggtgttgtc
tgtgggctagcaatatataattttactattgtagaccttcattttcctctggctttgtac
aaaaagctattgaataagaaaccatccctggatgacttaaaagaattgatgccagatgtt
ggcaggggaatgcaacagctactggactatccagaggatgacatagaagaagcattttgt
cttaattttactatcactgtggaaaattttggtacaacggaaattaaggagcttgttcct
aaaggtgctgacattcctgtagtcaaacaaaataggcaagattttgtagatgcatatgtg
gattacatcttcaacagatctgtggcttccttgtacagtgcattccatgaaggcttccac
aaagtgtgtggaggtaaagttcttcagctcttccagcccagcgagttgcaggcaatggtg
attgggaacacaaattacgactggaaggagctggagaagaatactgaatataaaggagaa
tactgggcagaccatcctacaattaaaatattctgggaggtttttcatgagttgtctttg
gagaagaaaaaacagtttttgctgtttctgacaggcagtgatcggattccaatccttgga
atgaagtgtctgaaactggtcatccagccaacaggaggaggagaggattatctgccagta
gctcacacttgctttaatcttcttgatcttccaaaatacacagataaagaaaccctgaaa
tctaagttgatccaggccatagaccactatgaaggtttcagtttagtataa
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