KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102111671
Entry
102111671         CDS       T02921                                 
Symbol
POLR2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03020  RNA polymerase
phi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:phi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102111671 (POLR2I)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102111671 (POLR2I)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phi03021]
    102111671 (POLR2I)
   03400 DNA repair and recombination proteins [BR:phi03400]
    102111671 (POLR2I)
Transcription machinery [BR:phi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     102111671 (POLR2I)
DNA repair and recombination proteins [BR:phi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102111671 (POLR2I)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom Ogr_Delta Zn_ribbon_GRF_2 HVO_0758 TtuA_LIM_N Zn_ribbon_NrdR
Other DBs
NCBI-GeneID: 102111671
NCBI-ProteinID: XP_005533889
LinkDB
Position
Unknown
AA seq 125 aa
MDGEGAYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggacggggagggcgcgtacgagccgggcttcgtggggatccgtttctgccaggaatgt
aacaacatgctgtaccccaaggaggacaaggagaaccggatcctgctctacgcctgcagg
aactgcgattaccagcaggaggccgacaacagctgcatctacgtcaacaagatcacgcac
gaagtggacgagctgacccaaatcatcgctgacgtgtcccaggaccccaccctgccccga
accgaggatcacccctgccagaagtgcgggcacaaggaggccgtgttcttccagtcccac
agcgcccgcgccgaggacgcgatgaggctttactacgtgtgcacggccccgcactgcggc
caccgctggacagagtga

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