Pseudopodoces humilis (Tibetan ground-tit): 102111682
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Entry
102111682 CDS
T02921
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04510
Focal adhesion
phi04512
ECM-receptor interaction
phi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102111682 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102111682 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102111682 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phi04147
]
102111682 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
phi00536
]
102111682 (COL4A2)
Exosome [BR:
phi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102111682 (COL4A2)
Glycosaminoglycan binding proteins [BR:
phi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102111682 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
102111682
NCBI-ProteinID:
XP_014104044
LinkDB
All DBs
Position
Unknown
AA seq
1715 aa
AA seq
DB search
MDISQLPSARIFLCQETGLLLILMEVVLSAVKVHAGGKKYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGERGYPGITGPKGEVGQRGVTGFPGADG
IPGHPGQPGPRGKPGHDGCNGTAGDPGDSGTPGLSGFPGSIGVQGPKGQKGEPYIVAPEI
ISRHRGDPGDSGFIGFPGPPGTLGIQGPVGPRGQRGRPGPPGPPGPPGPQGNRGLGFYGE
KGEQGAPGPPGPPGLPTRELMGVPSDKHKGERGDPGPRGEAGIPGVLLFPLEKGEEGVMG
YPGQRGLPGINGFPGLSGERGFPGFDGPPGGHGPRGSKGEPGEMGPPGPDSYFPSRIPRK
GARGDPGFPGVSGLPGDRGEEGDRGLPGDPGFSDGDGDKPGLPGEMGPKGEKGEIGSPAY
FAGPPGLPGKDGSPGLRGPPGPVGAPGPLFGLKGREGTPGRFGLQGFPGPRGQKGPKGEE
GDCTRCLLGEELRRGSTGPRGPPGFPGTPGQPGRKGEPGDQGPHGLPGYPGAKGFSGPAG
FPGRKGEKGDSLHITTKGTKGIRGDPGLPGIRGEDGLPGRDGLDGLPGQPGLPGDAVRGF
PGDPGYPGELGPKGFPGEAGLPGEGFPGPKGFQGPPGDQGQAGNPGPPGLPGLPGEPGQL
DCGQVTEDFPRGDATEPIWSGAGCVRPPKGFQGKPGVPGATGAKGARGFPGDPGPMGFPG
LNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAPGPKGLPGDVF
GAAAGSRGDVGFPGFPGLKGAPGDQGVPGARGADGSPGLPGSKGDPGPQGLPGLMGLPGT
PGTHGFPGPPGNRGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDKGDMGHTGL
PGIRGVTGPPGISGMDGFPGDKGLRGSPGIDGFKGMTGLKGRPGIKGIKGEFGPLGARGD
KGSQGARGFKGDRGDQGPPGEPPKLMPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGL
PGKTGTPGSPGHPSYVAGVKGDIGAKGLTGVKGYPGPTGSPGIRGFPGTTGVRGEKGVPG
ISGHFGTPGSHGEIGDRGETINLPGMPGLKGEVGVPGLTGIRGGVGPKGEGGDPGFPGIE
GLKGTQGVPGSVGQEGLPGLVGPPGQQGSPGTPGFPGEKGTPGWPGLPGQAGQPGLRGIS
GLHGLPGTKGLPGSPGPDGYGSAGFPGALGDKGEAGEPSRVEGSRGPPGQKGDRGVPGVP
GPFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGPQGQPGIPAPPGSKGESGQA
GRTGEIGPKGSRGDPGSAGRPGLPGFPGSKGRRGEQGVIGFMGTVGFPGDLGPIGPKGDR
GVTGFQGPPGPPGPPPHPPRLVAEQGSPGPRGNIGPQGSPGDMGPPGPPGDPGFRGSPGE
PGLQGRGGIPAPPGSRGEQGGMGFQGPVGFEGQPGRPGSPGPAGMPGRSVSMGYLLVKHS
QSDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLSRFSTMPFLYCNPGDICY
YASRNDKSYWLSTTAPLPMMPVAEEDIKPYISRCSVCEAPAVAIAVHSQEASIPHCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSGDTLKAGLIRSHISRCQVCMKNL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggacatctctcagcttcccagtgcacgtattttcctttgtcaggaaacggggcttttg
ctgatcctgatggaagttgtgctgtcggccgtcaaagtgcatgctggtggaaagaaatac
acaggaccatgtggaggcagagactgcagtggaggatgtcagtgtttccctgaaaaagga
agccgtggccagccaggactccttggatcacagggattcactggaccaccaggattgatg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggatacccaggaata
actggacccaaaggagaagtgggacaaagaggagtcactggattccccggggcagatggc
attcctggtcatccaggccagccaggaccaagggggaaaccaggtcatgatggctgtaat
gggacagcaggtgaccctggtgactcgggaactcctggactctctggtttccctggtagc
attggagtccaagggcccaagggccagaagggagagccgtacatagtagcgccggagatc
atcagccgacacaggggagatcctggggattcagggttcattggttttccaggacctcca
ggtacactgggtattcagggacctgttggtccaagaggacagcgaggaagaccaggacca
ccaggacccccagggcccccaggaccacaaggcaacaggggccttggcttctatggagaa
aaaggtgaacagggcgccccaggtcctccaggtccacctgggcttcctacaagagaactg
atgggtgtcccctctgacaaacacaagggtgaaagaggagaccctggaccaagaggggaa
gctggaattccaggtgtacttctctttcctctcgaaaaaggtgaagaaggggtaatgggc
tacccaggacaaaggggactgcctggcatcaatggctttccaggactcagtggagaaaga
ggttttccaggatttgatggtccacccggtggccatggtcccagaggaagcaagggggag
cctggtgagatgggtcctccagggccagattcctattttccttcccgcatcccaaggaaa
ggtgcaagaggtgatccaggctttccaggtgtttctggactcccaggagaccgaggagag
gagggagatcgtggattgcctggtgatcctggattttctgatggggatggggataagcca
ggcttacctggagaaatgggaccaaaaggtgaaaagggtgaaataggatctcctgcttat
tttgcgggaccacctgggcttccgggtaaggatggctcaccaggacttcgtggtccacct
ggtcccgttggagcccctggtcctctctttggattaaaaggacgagagggaacaccaggt
agatttggtctacaaggtttccctgggccaagaggacaaaaaggacctaaaggtgaagaa
ggggattgcactagatgccttttgggtgaggaactcagaaggggctctactggcccccgt
ggccctcctggctttccaggaacccctggccagcctggaaggaaaggagaacctggtgat
caaggaccacatggtcttcctggctaccctggagcaaaaggattttcgggtccagctgga
tttcctggacggaaaggagaaaagggagactctttacacataaccacgaaaggcaccaaa
ggaatccgaggagatcccgggctgcctggaatcagaggtgaagatggtttaccaggcaga
gacgggttggatggtttaccaggacagcctggccttccgggtgatgctgtcagaggcttc
cccggtgatcctggttatccaggtgaattaggcccaaaaggctttccaggagaagcaggc
ctgccaggtgaaggatttcctggtccaaaagggttccagggtcctccaggtgaccaagga
caagctggaaacccaggacccccaggtctgcctggtctgccaggagagcctggccaacta
gattgtggccaggtcactgaagactttcctagaggagatgcaactgagccaatatggtca
ggtgcaggctgtgttaggccaccaaagggattccaaggaaagccaggagtgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccaggtccaatgggtttcccaggg
ctaaatggtacacgaggtgatccaggtcgggaaggattcccaggtcctccaggttttact
ggacccaggggagacagaggcccaaatggtctacctggactgcagggacacccaggcctt
acaggaaaatccggggctccgggagcaccaggaccgaagggccttcctggtgatgttttt
ggagcagcagcaggttcccgaggggatgtcggcttccccggcttcccagggttgaaaggt
gcaccaggagatcaaggagtaccaggagctagaggagcggatggtagccctggtttgcca
ggatccaaaggagatccagggccacaaggtctccctggtttgatgggattaccaggaaca
ccaggaacacatggattcccaggtccaccaggaaaccgtgggccagatggtgggcctggc
tctcaaggacctctcggtccacctggtgctaggggagaagatggtgagcaaggttttcct
ggccctgtgggcctgaagggtctgtctggtgacaaaggtgacatgggtcacacgggatta
cccggtatacgtggtgtgactgggccccctggcataagtggaatggatggctttccagga
gataaaggcttgagaggttcacctggcattgatggtttcaaaggcatgacaggcctaaaa
ggaagaccaggcatcaagggaatcaaaggagaatttggcccacttggggctcgaggagat
aaaggctcacagggtgcacgtggtttcaaaggtgaccgtggagaccaaggccccccagga
gaacctccaaagctcatgcccagcatgatgatggaagttaaaggtgaaaaaggagatgtt
ggagaaaggggcacgaagggattctttggcttaaaaggtagcaagggaatgccaggcctt
cctggaaagacaggaaccccaggctcccctgggcatcccagctatgtggctggtgtgaaa
ggagacatcggtgcgaaagggctgacaggtgtgaaagggtatcctggtcccactggttct
cctggcatcagaggcttccctggcaccacaggagtcagaggagaaaagggcgttccagga
atttcaggccattttggtactcctggctcacatggagaaataggtgatcggggagagact
ataaacttaccaggaatgccaggccttaaaggagaagttggtgtgccaggcttaacaggc
ataagaggaggtgtgggaccaaaaggagaaggtggtgatcctggtttccctggcattgaa
ggtctcaagggcacgcagggtgtccctggctctgtgggacaggaaggtttgccaggactg
gttggccccccagggcaacaaggaagccctgggacacctggatttccaggtgaaaaggga
actcccggctggccaggcttaccaggacaagcaggccagcctggcttaagaggaatcagt
ggactgcatggtttaccaggcactaagggcttaccaggatcaccaggtccagatgggtac
ggctctgcaggtttcccaggtgcactgggtgacaaaggagaagcaggagagccaagcaga
gtagaaggcagccgaggacctccgggacagaagggagacagaggtgttccaggagtccca
ggaccctttggtattcctgggcaggaaggatttccagggcctcctgggatttcaaatata
tcaggatatcctggtgataaaggctccccaggtctagatggagttccaggctatccagga
ccacaggggcagcctggaatacctgctccaccaggaagcaaaggagaaagtggacaagca
ggtaggactggagaaattggcccaaaaggaagcagaggtgaccctggatcagcaggaaga
cctggcctgcctggattccctggatcaaaaggtcgtaggggtgaacaaggtgtcattggc
tttatgggcacagtaggatttccaggtgatctgggacccatcggacccaagggagataga
ggagtaactggcttccagggacctccaggccctcctgggccgccccctcatcctccaagg
ctggttgctgaacaaggttcaccaggcccccgtgggaatataggacctcagggaagccca
ggagatatgggacctccaggcccaccaggagatccaggtttcagaggctcacctggagag
cctggactccaaggcaggggtggcattccagctcctcctggctccagaggagaacaagga
ggaatgggatttcagggtccagtgggatttgaaggtcagccgggccgccccggtagccct
gggccagcaggcatgccgggccgcagtgtcagcatgggctacctgctggtgaagcacagc
cagtccgaccaagagccaatgtgcccagttggcatgaacaaactctggagtggatacagc
ctactgtattttgaaggacaagagaaagcacacaaccaggatctagggctggctggctcg
tgtttgtcccgttttagcaccatgccattcctctactgtaaccctggggacatttgttat
tatgcaagtcgaaatgataaatcctactggctctcaaccacagcacctctcccaatgatg
cccgtggcagaagaagacattaagccgtatatcagtcgctgctccgtttgtgaggcccca
gctgtggcaattgctgtccacagccaagaagcttctattcctcactgccctgaaggctgg
cgcagtttgtggatcggatattccttcctcatgcacactgctgctggtgatgaaggtgga
ggacagtcgctggtttctcctgggagctgcctggaagacttcagggcaactcctttcatc
gaatgcaacggcgcacgcggaacctgtcactactttgcaaacaaatacagcttctggctc
accacgatcgaccagcccttccaaagcaagccctcgggagacacactcaaggcaggactc
atccgaagccatatcagcagatgtcaagtctgtatgaaaaacctatag
DBGET
integrated database retrieval system
