Pseudopodoces humilis (Tibetan ground-tit): 102111971
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Entry
102111971 CDS
T02921
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102111971 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phi03021
]
102111971 (SMARCA4)
03036 Chromosome and associated proteins [BR:
phi03036
]
102111971 (SMARCA4)
Transcription machinery [BR:
phi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102111971 (SMARCA4)
Chromosome and associated proteins [BR:
phi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102111971 (SMARCA4)
Chromatin remodeling factors
BAF complex
102111971 (SMARCA4)
PBAF complex
102111971 (SMARCA4)
GBAF(ncBAF) complex
102111971 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
102111971
NCBI-ProteinID:
XP_005533654
LinkDB
All DBs
Position
Unknown
AA seq
1583 aa
AA seq
DB search
MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHSGHALPAAGYGPDTIHP
LHKPLDPMHEKGMSEDPRYGQMKGMGMRPGGHAGMGPPPSPMDQHSQGYPSPLGGSEHAS
SPVPSNGPSSGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQP
LPEHLQVAVQGKRPLPGMQPQIPALPPPAGAAQGPGQAPGAGQAPPGYSRPHGIGGPNMP
PPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPAS
PGPPPPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELEN
LPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSL
REARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATY
HANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTEL
VRQHKAAQVAKEKKKKKKKKKAENAEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKI
LTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKK
KIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSAL
MVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLI
IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKH
ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL
LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQL
PEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNH
PYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSL
MTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSA
DTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV
IQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDL
DRRREEARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSD
SLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPEGPTGPPPSARSRDKDEESRKQKK
RGRPPAEKLSPNPPPLTRKMRKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRK
PVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQK
VEKEEESDGEESEEEEEGEEEGSESEARSVKVKIRLGRKEKVPERGKGRRRGGRGGRPKP
LLSDDESEDEQEEDRSGSGTEDD
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccagagcctccgctgggagggaccccccggcctggcccctctcctggtccc
ggcccttccccgggatccatgctgggcccctctcccggcccttcgcccggatccggacac
tcgggacactcgggacatgcgctcccggcagcaggatacggcccggacaccatccacccc
ctgcacaagcccctggatccaatgcatgagaagggaatgtcggaggatccgcgctacggg
cagatgaagggaatgggaatgcggccagggggacatgcaggaatgggccccccacccagc
cccatggatcagcattcccaaggttatccatcccctctgggtggctcggagcacgcctcc
agcccagtgccatccaatggcccctccagcggctccgcgggcggctctggagcggcgctg
gatggctccggctccgactcgccggcgctgggccggggcccgtccccgttcaacgcggcg
cagctgcaccagctccgcgcccagatcatggcctacaagctgctggcgcgggggcagccg
ctcccggagcacctgcaggtcgccgtccagggaaagcggcccctgcccgggatgcagccg
cagattcctgctctacctccgcccgccggcgccgcacagggcccgggacaagcgcccgga
gcggggcaagcgccgcccgggtattccagacctcacggaataggagggcccaacatgccc
cctcccggaccctcaggagttccccccggcatgccgggacagccccccgggggccccccc
aagccctggccagaagggccgctgtcggcggcggctccgggcggggccccccagaagctg
ctgccgccaccccctgcaggccgtccctcccccgtgcccccggctgtgcccccagcgtcc
cccgggccccccccgccctcgccggggcagccggcgccgcctgcgctcccgatccatccc
aaacagaaccggatcacccccatccagaaaccccgcggcctcgaccccgtcgagatcctg
caggagcgggagtacaggctccaagcccgcatcgcccaccgcatccaagagctggaaaac
cttcccggctccttggccggagacctgcggaccaaagcaaccatcgagctcaaggctctg
cggctgctcaacttccagcgccagctgcggcaggaggtggtggtgtgcatgcggcgggac
acggcgctggagacggcgctcaatgccaaggcctacaagcgcagcaagcggcagtcgctg
cgtgaggcccgcatcacggagaagctggagaagcagcagaagatcgagcaggagcggaag
cgccggcagaagcaccaggaatacctcaacagcatcctgcagcatgccaaggacttcaag
gaataccaccggagcgtgagtgggaagatccagaagctgaccaaggcggtggccacgtac
cacgccaacaccgagcgcgagcagaagaaggagaacgagcgcatcgagaaggagcggatg
cgccggctcatggcagaggatgaggagggctaccggaagctcatcgaccagaagaaggac
aagcgcctggcctacttgctgcagcagacagatgagtacgtggccaacctaacagagctt
gtgcggcagcacaaggcagcccaggtggccaaggagaagaagaagaagaaaaagaagaag
aaggcggagaacgccgagggacaggctccagccatcggccccgatggggagccactggat
gagacgagccagatgagcgacctcccggtgaaggtgatccacgtggagagtgggaagatc
ctcaccggcaccgatgcacccaaggccgggcagctggaggcctggctggaaatgaacccc
gggtacgaggtggctccacgctccgacagcgaggagagcggctccgaggaggaggaggag
gaggaggaagaggagcagccacagccagcacagccagcactgcccgtggaggagaagaag
aagattccagatccagacagtgacgatgtctcggaagtggatgcccgacacatcattgag
aacgccaagcaggacgtggatgacgagtacggggtgtcgcaggcgctggcgcgggggctg
cagtcctactacgccgtggctcacgccgtgactgagcgcgtggacaagcagtcggccctg
atggtcaacggcgtcctcaagcagtaccagatcaaaggcctggagtggctcgtgtccctg
tacaacaacaacctcaatggaatcctggcggacgagatgggactggggaaaaccatccag
accatcgccctcatcacgtacctcatggagcataagcggatcaacggccccttcctcatc
atcgtcccgctctcgactttgtccaactgggcctatgagttcgacaaatgggctccttcc
gtggtcaaggtctcctacaagggctctccggcggcacgacgcgccttcgtcccgcagctc
cggagtggaaaattcaacgtcctgctcacaacatacgagtacatcatcaaggacaagcac
atcctggccaagatccgctggaagtacatgatcgtggacgaggggcaccggatgaagaac
caccactgcaaactgacgcaggtgctcaacacccactacgtggccccacggcggctgctc
ctcactgggaccccgctccagaacaagctcccggagctctgggcgctcctcaacttcctg
ctcccgaccatcttcaagagctgcagcaccttcgagcagtggttcaacgcgccgtttgcc
atgaccggggagaaggtggacctgaacgaggaggagacgatcctcatcatccgccgcctg
cacaaggtgctccggcccttcctgctccggcgcctcaagaaggaggtggaagctcagctg
ccagaaaaggtcgagtatgtgatcaagtgcgacatgtcagcgctgcagcgggtcctgtac
cggcacatgcaggccaagggtgtcctcctcaccgacggctccgagaaagacaagaagggg
aagggcggcacgaagacgctgatgaacacgatcatgcagctgcgcaagatctgcaaccac
ccctacatgttccagcacatcgaggaatccttctcggagcacttggggttcacgggcggg
atcgtgcaggggctggatttataccgtgcctccgggaaatttgagctcctggaccggatc
ctgcccaagctccgggccaccaaccacaaggtgctgctcttctgccagatgacctccctg
atgaccatcatggaggactattttgcttaccgcggcttcaaatacctcaggctggatggg
accacgaaggcagaggaccggggaatgttgctgaagacattcaatgagccaggctccgag
tatttcatcttcctgctgagcacgcgggccggggggctggggctcaacctgcagtcagct
gacaccgtcatcatcttcgacagcgactggaacccacaccaggacctgcaggcccaggac
cgggcccaccgcatcgggcagcagaacgaggtccgcgtgctccggctctgcaccgtcaac
agcgtggaggagaagatcctggcggccgccaagtacaagctcaacgtggaccagaaggtg
atccaggccggaatgttcgaccagaaatcctccagccacgagcgccgggcgttccttcag
gccatcctggagcacgaggagcaggatgaggaggaggacgaggtgcccgacgacgagacc
gtgaatcagatgatcgcccggcacgaggaggagttcgacctgttcatgcgcatggacctg
gaccggcggcgggaggaggcgcggaaccccaagcggaagccgcggctgatggaggaggac
gagctcccgtcctggatcctgaaggacgacgccgaggtggagcggctcacctgcgaggaa
gaggaggagaagatgttcggccgcggctcccggcaccgcaaggaagtggattacagcgat
tccctcacggaaaaacagtggctcaaggccatcgaggaggggacactggaggagatagag
gaggaagtccggcagaagaaatcctctcggaagcggaagcgagagcccgagggtcccacg
gggccccccccaagcgcccggagccgggataaggacgaggagagccggaagcagaagaag
aggggccggcccccggctgaaaaactgtccccaaatccaccccccctcactcggaaaatg
cggaaaatcgtggatgcagtcatcaagtacaaggacagcagcgggcgacagctgagtgaa
gttttcatccagctcccatcccgcaaggagctgccagagtactacgagctcatccggaaa
cctgtggacttcaagaagatcaaggagcggatccgaaaccacaagtaccggagcctcaac
gacctggagaaggacgtgatgctgctgtgccagaacgcccagaccttcaacctggagggg
tccctgatctacgaggattccatcgtgctgcagtccgtgttcaccagcgtccggcagaag
gtggaaaaggaggaggaaagtgacggagaggagagcgaggaggaggaggagggagaggaa
gaaggatccgagtccgaggcccgctcagtgaaggtgaagatccgtctgggccgaaaggag
aaggttccggagcgtgggaagggccggcgccggggggggcgggggggacgccccaaaccc
ctcctgagcgacgacgagagcgaggacgagcaggaggaggatcgctccggcagcggcacc
gaggacgactga
DBGET
integrated database retrieval system
