Pseudopodoces humilis (Tibetan ground-tit): 102112088
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Entry
102112088 CDS
T02921
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03013
Nucleocytoplasmic transport
phi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102112088 (CASC3)
03015 mRNA surveillance pathway
102112088 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phi03019
]
102112088 (CASC3)
Messenger RNA biogenesis [BR:
phi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102112088 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
102112088
NCBI-ProteinID:
XP_005531578
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MADRRRQRASQDSEDSEGSAASDSAASAPGSPRSARSRSGSGSRSGSGSPRLPHRPPRGA
AGALGAGPRGRGAESAGGAGGKSAAESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEE
ESSKVELKQDSNDSCESAARGEKGNEKADPKGAVTGERQSGDGQESTEPVEKKVGKKVPK
HLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQ
APKTRQELIALYGYDIRSAHNPDEIKPRRMRKPRFGSPPQRDPNWSNERPPKPPRHQGAK
SPSAPPRSFNNRSSASTGRMPPARNYPRMGGYKETRPGYRALEATVPHRNGEQAKQESGY
RGKRAEQSPSRDTSPELEMAHVHGSPGKEEGALENQATAADAAQPPPDRPVEKKSYSRAR
RTRVKAGEAGKLAEEVPASEGLAPAIPKPTPAETSPPPAKSNWESSVESSVDGLEQEMSQ
MNLTEQNWSPGQSQFIPPREMRGIPNHMHVGTGPPPQFNRMEEMAVPGGRVKRYSSQRQR
PPVPEPAPPMHISIVEGHYYDPLQFQGPIYTHGENPAPLPPQGMIVQPEMHLPHPGLHAH
QTPPAMANPGLYPPPVSMPPGQPPPQQLLTPTYFSAPGVMNFGNPGYPYPPGALPPPPPP
HLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSN
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacagcgagggttcggcg
gcctccgacagcgctgcctccgctcccggttccccccgctccgcccgctcccgctcgggc
tccggatcccgctccgggtccggctcgccccgcctgccgcaccgcccgccgcgcggcgcc
gctggggctctcggcgctgggccgcggggccgcggggccgagagcgccggtggggcgggg
gggaagagcgcggccgagtcggagtgtgaaagtgaggatggcatcgaaggagatgccgtg
ctctccgactatgaaagcgccgaggactcggaggcagaggaagaggattacagcgaggaa
gaaagctccaaggtggagctgaagcaggacagcaacgattcctgcgagtcggcagccaga
ggggagaaggggaatgagaaggcggatcccaagggagcggtgacgggcgagcggcagagc
ggggacgggcaggagagcacggagcctgtggagaagaaagttgggaagaaggttcccaag
cacctggacgacgatgaggatcggaagaacccggcgtacatcccgcgcaaggggctcttc
tttgagcacgacctccgagggcagacgcaggaggaggaggtcaggccaaagggtcgtcag
cggaagctgtggaaggacgaggggcgctgggaacacgacaagttccgtgaggatgagcag
gcccccaagaccaggcaggagctgatcgcgctgtacggatatgacatccgctcagcccac
aaccccgacgagatcaaaccccgcaggatgcgcaaacctcggtttggcagtccccctcag
cgagaccccaactggtccaatgagaggccccccaagccccccaggcaccagggtgccaag
agcccctcggctcctccacggtccttcaacaaccgcagctctgccagcactggcaggatg
ccccctgccagaaactaccccaggatggggggctacaaggagacccgtccaggctaccgg
gctttggaggcgaccgtcccgcaccggaacggggaacaagccaagcaggagagcggctac
cgcgggaaacgtgcagagcagagcccgtcaagggacacgtcccccgagttggagatggca
catgtccatggcagccctgggaaggaggagggggctctggaaaaccaagccacggctgct
gacgctgcacagccgccaccagacagaccagtcgagaagaaatcttattcccgggcaaga
aggaccagagtcaaggctggggaggcggggaagctggcagaggaagtgcctgcttctgag
gggctggctcccgcgattccgaaacccacgccggccgagacctcccccccgccagccaag
agcaactgggagtcatcagtggaatccagcgtggatggacttgagcaggagatgagccag
atgaacctgacagagcagaactggagcccggggcagtcccagttcatcccgccccgggag
atgaggggtattcccaaccatatgcacgtgggaactgggccaccgccgcagtttaaccgg
atggaggagatggcagtgccggggggccgtgtgaagcgctactcatcgcagcggcagaga
ccccccgtgcctgagcctgcgccccccatgcacatcagcatcgtggaagggcactactac
gacccattacaattccagggaccaatctacacccacggtgagaacccagccccgctgccg
ccccaagggatgattgtgcagccggagatgcacctccctcatccaggtttacacgcccac
cagacgccccctgccatggcaaaccccggcctctaccccccaccagtgtccatgcccccg
ggccagcccccgccgcagcagctgctcactccgacttacttctccgcccctggagtgatg
aatttcgggaatcctggctacccctacccccctggagctctgccccctccgccccctcct
catctctattccaacacgcaggcgcagtcccaggtgtatgggggggtcacctactacaac
actgtccagcagcaggtgcagcccaagccctccccgccccgccggacgtcccagcctgtg
accatcaagccaccccctccagaggacagcaaaggtgaaaaatcaaaggagaggagcaac
acgtag
DBGET
integrated database retrieval system
