Pseudopodoces humilis (Tibetan ground-tit): 102112111
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Entry
102112111 CDS
T02921
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phi01002
]
102112111 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102112111 (USP42)
Enzymes [BR:
phi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102112111 (USP42)
Peptidases and inhibitors [BR:
phi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102112111 (USP42)
Ubiquitin system [BR:
phi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102112111 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
102112111
NCBI-ProteinID:
XP_005523020
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPTEESNKVSVDKGPGGHI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANSKQAAFMGPRLPPHMIKSSSRINGNGPLKEDPSTVGVAVKRPSS
APPTACVQNWAISRPPMTDPSKTQKITISIHNKLPTRQAVSQAECPSSTVEEEDLKPIPS
ATITNSSAAEPTSNLSTVSVATNVSKQEVPDEIFVEPAVNGNPKLCSDNMVPYGAEPSGK
SEESKGLFKRNCNVISSNGILIGKVVRTLHNSHSSCQNAEERSQHELPKIDSLNGAINLD
NEYKENGLKLDDSTCQVQPVKPSEIFFSKANGVLETMPKALSPDPQGILDSLTYSQLNSL
SEEKSVSGSQKSSDNDGVMETVVMEALFAYEESRKVPSNFSCEVEKLFTQSDSETIFTKE
EVAESIITKADNAHLNINGQHKVRKKSLDTESEFLGQCESEDIRDKDKLRRSKEPELISK
ENSLYIKGSPESKEKLGQISSIKPDIECSSKKLASLDITDKCQDTKDISNNYVEVPPVND
SSITKLDKVLESQFSRADEGLGNKICEDDDKHMKKNKKKIHDSKRTDKEHYRRKRENSDT
EEKERQTRHKPDDHSHRRRSSHSVETNKQSRHKQEYCSESKYRSSHNERNSPSNGRSSGK
YSRYRSRSRERTDLDRNRYYYSKGDRPWIRERYYQDEARRWEKCRYYNDYYSSHGTRDGR
ERRSSHCDKDYDKLSQSYSRSHKDYHCKSRWAHSTLSREEDVHHFSSHRANFHHCSVPQQ
HSEKYSRERHALPPVSAHSNFEDSSRENEKEKLRNGKRKYSHQEESGSDIEKKCRKTDDQ
RNKKYKKVKKKKKSKDKHREKDYKLYDLDCSVLHFDNDNRKHKKKKKKKKHDRKDLLEYL
DPRFQKKTWEKKEESRPPDDHLCEQYRNQGSKQPYKEEKPSGAGDSKKYSSMASTEYVRD
VELTDESLQYSD
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaaatcttcctcaagacggtct
gacaaatctatgaaaccccgtactaaaaaaatgacgtcacgcactgcaagtttgggccgg
gtaccccctacagaagaatcaaacaaagtctctgtggacaaaggtcctggggggcatatt
tattgtagatcatctcaaaaatcaaagccttttgcccaaagagatctagttgttaatgat
gggattgctccgccacaaagaattctttttccgcctgagaaaatctgtatggattggcaa
caaacacaaagtgttggagttggactgcagaacctcggcaacacatgtttccttaattct
actctccagtgtttgacctacacacctcctcttgccaattacatgctttcacttgagcac
accaagtcatgtcatgtagaaggattctgtatgatgtgcacaatggaaagtcacatcaac
caggtcctgtgttgttctaataatgccatcaaacctacgtctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttgcagaaagcttgcttgaatgggagcaccaaattagacagatcttct
caagccaccacacttatttatcaaatatttggaggatatctaagatctcgagtaaagtgc
ttgaactgcaaagcggtgtcggatacgtacgagccatttcttgatgttactttggacata
aaggcagttacatccgtcaccagggctctagaacaatttgtgaaaccggaacagctggat
ggtgaaaatagctataaatgtagcaagtgtaaaaagatggttccagcatcaaagagatac
acgatacatcgctcttccaatgttctcacaatatcactgaaaagatttgcgaattttaca
ggtggaaagatcaacaaggatgtaaaataccctgaatatttggatcttcgagcatatatg
tcccaatctattggagaacccctcatctatgctttatatgcagttcttgtacatagtggc
ttcaactgtaatgctggacattatctctgcttcataaaggctggtaatggactttggtac
cgaatgaatgatgcctcagtagagctttctgatatcaaaacagttctcaatcagcaagct
tacgtgcttttttatatcaggcgctacgatttgacgctgggggagcgagccttttacctg
cccgcgccctcctacccccgctccttcctcggccagcgtggagccaacagcaagcaggct
gcattcatgggaccacggctgcctcctcacatgattaagagttcaagtcgtataaatgga
aatggacccttaaaagaggatcccagtactgtgggtgttgctgtaaaaaggccatcttca
gctccaccaacagcttgtgttcaaaactgggcaatttccaggcctccaatgacagaccct
tccaaaacgcagaagatcacgatcagtattcacaacaagctgcccacacggcaggcggtg
tcgcaggcagagtgtccgagcagcactgtggaggaggaggatctgaagcccattccttca
gccacaattacaaactcttccgcagcagagcctacctcaaacctctccacagtgtcagtt
gctactaatgtctccaagcaggaggttcctgatgaaatctttgttgagccagcagtgaat
ggaaaccccaagctctgttctgataacatggtcccttacggtgcagagccttcaggaaaa
tctgaggagtcaaagggcttgttcaaaaggaattgcaacgtcatatcttccaatggaatt
ctgattgggaaggtggtccgtacattgcataattcccattcatcctgtcagaatgctgaa
gaaagatcccagcatgagctgccaaaaattgattccctaaatggtgctattaatttagat
aatgaatataaagaaaatggactgaaacttgatgattccacttgccaagtccaacccgtt
aaaccttctgagattttcttctctaaagcaaatggagtgcttgaaacgatgcctaaagct
ttgtcaccagatcctcaaggtatcttagactctcttacgtacagccagttgaacagcttg
tcggaagaaaaaagtgtctctggatctcagaaatcttctgacaatgatggagttatggaa
actgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttccttccaacttt
agctgtgaggttgagaaactttttactcaatcagattctgaaaccatttttaccaaagaa
gaagttgctgaaagtattataacaaaagctgataatgcacatctcaatatcaatggtcag
cacaaggttaggaaaaaatccttggatactgaaagtgaattccttgggcagtgtgagtct
gaagacatcagagataaagacaaactaagaagatcaaaagaacctgaactcatttcaaaa
gaaaattctttgtacatcaaagggtctcctgagagcaaagagaaattagggcaaatttcc
tctataaagcctgacattgaatgtagttctaaaaaacttgcatctctagatattacagat
aaatgccaagatacaaaggacatttctaataactatgtagaagtaccacccgttaatgac
tcttctattacaaagctggataaagtattggaaagtcaattttctagagcagatgaggga
ctgggtaataaaatatgtgaagatgatgataaacatatgaaaaaaaataagaaaaaaatc
catgactctaaaaggactgacaaagagcattaccggagaaagagagagaactcggacact
gaggagaaggagagacaaaccagacacaaaccagatgatcattcccacaggaggaggagc
tctcacagcgtggaaacaaacaagcaaagccgtcataagcaggagtattgcagtgagagc
aagtacagatcctcccacaacgaaagaaacagtcccagtaatggcaggagctcaggaaaa
tattctcgttacagatcccgaagcagagaaaggacagatctggacaggaataggtattat
tattccaaaggagacagaccttggattagagaaagatactatcaagatgaagcacggaga
tgggaaaaatgcagatactacaatgattattattcctcccatggaacaagggatggtagg
gagaggagatcctctcattgtgataaagactatgacaaactgagccaatcttacagcagg
tcacacaaggattatcattgcaaaagcagatgggctcacagcacactctcccgagaggag
gatgtgcatcacttcagcagccacagagcaaacttccaccattgttcagtacctcagcag
cactcggaaaaatactctcgtgagaggcacgcacttccaccagtgtcagctcactcaaat
tttgaggactcttcccgggaaaatgaaaaagaaaaactaagaaatggcaaaagaaaatac
tcccaccaagaagaaagtggaagtgacatagaaaagaaatgccgaaagacagatgaccaa
agaaacaaaaagtataagaaggtcaagaagaaaaagaagtccaaagataaacatcgagag
aaggattacaaactttatgatttggattgctcagtgctccactttgacaatgacaatcgc
aaacataagaaaaagaagaaaaagaagaagcacgacaggaaagacttattggaatattta
gatcctcgtttccagaagaagacatgggagaagaaggaagaatcccgtcctccagatgac
catttatgtgagcaatacagaaaccagggcagtaaacaaccctacaaggaagagaagcct
tctggtgcaggtgacagcaagaaatacagctccatggcatccactgagtatgtcagagat
gtggagctgactgatgaaagccttcaatactcagactga
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integrated database retrieval system
